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KJC3_004728-T1, KJC3_004728-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004728-T1
Unique NameKJC3_004728-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:523931..526105+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004728-T1 ID=KJC3_004728-T1|Name=KJC3_004728-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2175bp|location=Sequence derived from alignment at ch4:523931..526105+ (Aspergillus niger KJC3)
ATGCCCTCCTCAAAGGCCCAAAAGGCCAAAAAGGTTAAGAACCAACCCAG
CATCAAAAACTACTTCAAGAGGAAGCAGGATGAGGTCAGGGACCCCATTC
CAGCTACCTCTCGTCCGACCAAACGTCGCCGGGTCTGTGGCCTGGATGAT
GGGTCGGATGGGGATGGCAGCGGCTGCAAGAACAGTGTTCTTGAAAAACA
GCTGCCATCAGGTGAAGGTGATCGCAAGATGGACAGTGTCCAGAAGGCTT
CACCTTCACTCCTGAAGTGCGGGGATAGTGAGATGGACTGTGTCCATAAC
GCGACCCCGATTGATGACGATTCTGCCCTCATCAGTGATGGGGAACAGGA
CGTTGTCGACGACGAAGTTGGCGACAATGAGTATATTGCCGGCCCTGACG
ACGTCGATGTTGAGGCTAAGTTCGAAGTCATAGTGACTTATACAACTTCT
AGCCTTGCTACACCTGTCAATACGGACACAGTCTTTGCAGGGATACTGCG
AAAAGTACTCGTCCGTCTGAAGTCGTGGGCCTCTGATAATGAAGTTATTT
CCATGCCCGAGGACAAAAAGCCAATAACAGTTGGTTATTGGGGACTTCTG
AGCAGGCTGTCAGTGGATTTTATCCTGCCATTATTCCTTAGCGGGATTTC
AAAGGAAGTCCAGGGACTTTTCCAAAAGCAGGAATGGACATTAGAAGATT
TAAAGTCCCTTCCAGAGATCAAAGGTGACAAGCGACAGGGGATCTATGCA
AATTTTGCCACTGGTAAAATAGAACATCCCAACGAAGCTGGCTGCGAGAC
ATATGTAGGATCGAGCCGTTCCTTACAGAAGCGAGTATCACAGCACATGG
AAATAGTAAGAGGATCCTCGTCCAAGGATGCAAAAAGCTTGCATTACCGG
CAAATCAGTCGGAAGGATGTTCAGACGAACTTCCGAAGACTTGCAGTCTT
TAGTCGTCCAATTGAACCAGGGTATCTCTTGATGCTAGAGGCTATATTCA
TGATACTCTTCGATACATACCAGTTTCCTGGGTATGTCACAAAGTGGGCT
ACCGAAGACTCATACAAATTAACGAAGTTTCTCCGAAAAGATCTGGAACT
TCCGTCTGTATCATGGCGTGGGATGAATGCAGCGTGGCCCTTGCGCCAAG
GATTCTTTAATAAGAGTGCAAAGAAACCATCCCCATGCGCAAATCCACCA
TGTGAAGTTATGACATATCCAAAGGCTTTGCTTCCAGCTGAAGGTGTTCC
AAAAGGCAATCGTCGGAATGCCGAAGTTGGCAATCCATTAGGGCGGTATG
TGTGTGGTCGTTGCAGCAACTATATGTCTAAGAACAAATCGCTTCCTGAC
AAGACGTGGATTGATAGAATCTTACAGCGACAGGCAACACGGGCAGCTGC
AGGAAAGGATCCTGTATGTGCCTGCTGCGACAGATCAGAGTCGCAATTGC
GCACGAGAAGAAGATATGACAGATTAGGTAAAATGCTTCTTCTCCAGCAT
GATCTTCTACCAGATAAGCTTCTGTGCCATGCCTGCTTCCAGTTTTATAG
TAATAATAAGAGATTACGAACACCCGAGGAAACTGAGATTTTCCTCGACA
GTTCATTTCTGGGTGATGCTCGGCTAGCAGGCGGGCCAATTCGGTGTGAC
AACTGTGATGTGATAGAAGGATCCATTCATAGTGGCAATCAACCGCATCT
GACAAATAGGGAAGCTAAGAAAGTTCTGTGCACCCGATGTGATCAGCAGT
ACAGAAAGACACATACGTTTAGCAGCCAGGGTTTGATTGAAAGCAGAAAA
ACCAAGGTTGATATCGAGGCTGAACGCAAGGCAGGGAGACCAGTGAAGTG
CCACAATTGCGGTGCAGTAGAAGGATCGTCGTTGGCCAACAAGAAGAACT
ACAACATTAGCCAAACAGATGGTAATGTATATTGCAGTCCCTGTGGTGTG
TATTACAGCGTGCATGGCACACACCGCGATCCAAAGACCGCTCGCTATAC
CGAGAAGTCCCAAGAGCTAAAGGAAAGCCGAGAGCAAAACAGGCAAGTTG
TCTGCGAGGACTGCCAGGCAGTCGAAGGTTCATCAAGCACCTTCGGCAAG
TTTCTTGTTAACAAGAAATCAGCTGAGATTCTATGCAAGCCATGCGGTAA
GAAACGGTGGGCGATCAAAAAGTAA
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Coding sequence (CDS) from alignment at ch4:523931..526105+

>KJC3_004728-T1 ID=KJC3_004728-T1|Name=KJC3_004728-T1|organism=Aspergillus niger KJC3|type=CDS|length=2994bp|location=Sequence derived from alignment at ch4:523931..526105+ (Aspergillus niger KJC3)
ATGCCCTCCTCAAAGGCCCAAAAGGCCAAAAAGGTTAAGAACCAACCCAG
CATCAAAAACTACTTCAAGAGGAAGCAGGATGAGGTCAGGGACCCCATTC
CAGCTACCTCTCGTCCGACCAAACGTCGCCGGGTCTGTGGCCTGGATGAT
GGGTCGGATGGGGATGGCAGCGGCTGCAAGAACAGTGTTCTTGAAAAACA
GCTGCCATCAGGTGAAGGTGATCGCAAGATGGACAGTGTCCAGAAGGCTT
CACCTTCACTCCTGAAGTGCGGGGATAGTGAGATGGACTGTGTCCATAAC
GCGACCCCGATTGATGACGATTCTGCCCTCATCAGTGATGGGGAACAGGA
CGTTGTCGACGACGAAGTTGGCGACAATGAGTATATTGCCGGCCCTGACG
ACGTCGATGTTGAGGCTAAGTTCGAAGTCATAGTGACTTATACAACTTCT
AGCCTTGCTACACCTGTCAATACGGACACAGTCTTTGCAGGGATACTGCG
AAAAGTACTCGTCCGTCTGAAGTCGTGGGCCTCTGATAATGAAGTTATTT
CCATGCCCGAGGACAAAAAGCCAATAACAGTTGGTTATTGGGGACTTCTG
AGCAGGCTGTCAGTGGATTTTATCCTGCCATTATTCCTTAGCGGGATTTC
AAAGGAAGTCCAGGGACTTTTCCAAAAGCAGGAATGGACATTAGAAGATT
TAAAGTCCCTTCCAGAGATCAAAGGTGACAAGCGACAGGGGATCTATGCA
AATTTTGCCACTGGTAAAATAGAACATCCCAACGAAGCTGGCTGCGAGAC
ATATGTAGGATCGAGCCGTTCCTTACAGAAGCGAGTATCACAGCACATGG
AAATAGTAAGAGGATCCTCGTCCAAGGATGCAAAAAGCTTGCATTACCGG
CAAATCAGTCGGAAGGATGTTCAGACGAACTTCCGAAGACTTGCAGTCTT
TAGTCGTCCAATTGAACCAGGGTATCTCTTGATGCTAGAGGCTATATTCA
TGATACTCTTCGATACATACCAGTTTCCTGGGGAAGCTAAGAAAGTTCTG
TGCACCCGATGTGATCAGCAGTACAGAAAGACACATACGTTTAGCAGCCA
GGGTTTGATTGAAAGCAGAAAAACCAAGGTTGATATCGAGGCTGAACGCA
AGGCAGGGAGACCAGTGAAGTGCCACAATTGCGGTGCAGTAGAAGGATCG
TCGTTGGCCAACAAGAAGAACTACAACATTAGCCAAACAGATGGTAATGT
ATATTGCAGTCCCTGTGGTGTGTATTACAGCGTGCATGGCACACACCGCG
ATCCAAAGACCGCTCGCTATACCGAGAAGTCCCAAGAGCTAAAGGAAAGC
CGAGAGCAAAACAGGCAAGTTGTCTGCGAGGACTGCCAGGCAGTCGAAGG
TTCATCAAGCACCTTCGGCAAGTTTCTTGTTAACAAGAAATCAGCTGAGA
TTCTATGCAAGCCATGCGGTAAGAAACGGTGGGCGATCAAAAAGTAAATG
CCCTCCTCAAAGGCCCAAAAGGCCAAAAAGGTTAAGAACCAACCCAGCAT
CAAAAACTACTTCAAGAGGAAGCAGGATGAGGTCAGGGACCCCATTCCAG
CTACCTCTCGTCCGACCAAACGTCGCCGGGTCTGTGGCCTGGATGATGGG
TCGGATGGGGATGGCAGCGGCTGCAAGAACAGTGTTCTTGAAAAACAGCT
GCCATCAGGTGAAGGTGATCGCAAGATGGACAGTGTCCAGAAGGCTTCAC
CTTCACTCCTGAAGTGCGGGGATAGTGAGATGGACTGTGTCCATAACGCG
ACCCCGATTGATGACGATTCTGCCCTCATCAGTGATGGGGAACAGGACGT
TGTCGACGACGAAGTTGGCGACAATGAGTATATTGCCGGCCCTGACGACG
TCGATGTTGAGGCTAAGTTCGAAGTCATAGTGACTTATACAACTTCTAGC
CTTGCTACACCTGTCAATACGGACACAGTCTTTGCAGGGATACTGCGAAA
AGTACTCGTCCGTCTGAAGTCGTGGGCCTCTGATAATGAAGTTATTTCCA
TGCCCGAGGACAAAAAGCCAATAACAGTTGGTTATTGGGGACTTCTGAGC
AGGCTGTCAGTGGATTTTATCCTGCCATTATTCCTTAGCGGGATTTCAAA
GGAAGTCCAGGGACTTTTCCAAAAGCAGGAATGGACATTAGAAGATTTAA
AGTCCCTTCCAGAGATCAAAGGTGACAAGCGACAGGGGATCTATGCAAAT
TTTGCCACTGGTAAAATAGAACATCCCAACGAAGCTGGCTGCGAGACATA
TGTAGGATCGAGCCGTTCCTTACAGAAGCGAGTATCACAGCACATGGAAA
TAGTAAGAGGATCCTCGTCCAAGGATGCAAAAAGCTTGCATTACCGGCAA
ATCAGTCGGAAGGATGTTCAGACGAACTTCCGAAGACTTGCAGTCTTTAG
TCGTCCAATTGAACCAGGGTATCTCTTGATGCTAGAGGCTATATTCATGA
TACTCTTCGATACATACCAGTTTCCTGGGGAAGCTAAGAAAGTTCTGTGC
ACCCGATGTGATCAGCAGTACAGAAAGACACATACGTTTAGCAGCCAGGG
TTTGATTGAAAGCAGAAAAACCAAGGTTGATATCGAGGCTGAACGCAAGG
CAGGGAGACCAGTGAAGTGCCACAATTGCGGTGCAGTAGAAGGATCGTCG
TTGGCCAACAAGAAGAACTACAACATTAGCCAAACAGATGGTAATGTATA
TTGCAGTCCCTGTGGTGTGTATTACAGCGTGCATGGCACACACCGCGATC
CAAAGACCGCTCGCTATACCGAGAAGTCCCAAGAGCTAAAGGAAAGCCGA
GAGCAAAACAGGCAAGTTGTCTGCGAGGACTGCCAGGCAGTCGAAGGTTC
ATCAAGCACCTTCGGCAAGTTTCTTGTTAACAAGAAATCAGCTGAGATTC
TATGCAAGCCATGCGGTAAGAAACGGTGGGCGATCAAAAAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004728KJC3_004728Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004728-T1.exon1KJC3_004728-T1.exon1Aspergillus niger KJC3exon
KJC3_004728-T1.exon2KJC3_004728-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004728-T1.cdsKJC3_004728-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004728-T1KJC3_004728-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013088
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:523931..526105 +
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