You are here

Home

KJC3_004752-T1, KJC3_004752-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004752-T1
Unique NameKJC3_004752-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:604698..606436-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004752-T1 ID=KJC3_004752-T1|Name=KJC3_004752-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1739bp|location=Sequence derived from alignment at ch4:604698..606436- (Aspergillus niger KJC3)
CCTCCATCCACTCCCATCCGTCTGTTTCCCGCCCAATTCATGCCGCTCGC
CTCGCGGTGATACCCCTCTCCTCCTCTCCGCTTTCTTTCACTTCCCTTAA
TTGTCATACCCAGCTTCCCCCCCCTCTCGCCCGCCATGTTTCGCTCCGCA
CCTCGAGCTATCCTCCGCGCACCGGCCGTCGCAGTCCGTGGCCCGGCTAC
CAGACGATTGATAAGCACCAACACACCCGCCGACTCCAAGCCGAGGAGTT
GGAAGAACACCGCTGCCCGCCTGGGTCTGGCCATTGGCGCCGTCTACTAC
TACAACACGAGCCCCTACTTCGCTCAAACCCCGTCCTGTATGTGCCTGAT
GCCGTTGCCGTTGCCGCTTGGTTTTTTCCCACCGCATGCATGGCGGTTCG
CCGTCATGCCTCGGAGGAGAAGAAATCATCACACACCACCTTCTCCTCCC
TCCCTCGGACCAGTCCAGCTAATGATGTAGTCTCTCTTCTCTCGCAATCC
AAGTCCGACTCCGTCGAAGCCGAATCCTCCCTCACCATCGACTCCATCAA
GCCCAAGATCCGCGAACAGAAGAAGTCCTCGGCTCCTGCTCCCGCTCCCA
CTCCTGCTCCTGCTGCCCCCGAAGCCCCTCAAGATGATGCGCAACAACCC
TCCCCCGAAGCCGCTACGCTGAAGTCCCCCGAGGAGCTCGAGGCCGAGGC
CGGCCAGGAAGGCGCCTTCAACCCCGAGACCGGCGAGATTAACTGGGACT
GCCCTTGCCTGGGCGGTATGGCCCACGGACCTTGCGGTGAGGAGTTCAAG
GCTGCTTTTAGCTGCTTTGTGTACTCCTCTGAGGAGCCTAAGGGTATTGA
CTGCATTGAGAAGTTCAAGTACGTACCCACCTTCTGACCATATAATCTCG
AATGCATTACTAATGCGGGGAACCACCACTTAACAGGGGCATGCAAGACT
GCTTCAGACTACACCCCGACGTGTACGGTGCTGAGCTCGAAGATGACGAG
GAGGCTGCTCCCGCTGCTGCCGTCCCCGAGGCCGGTGACGAGCAGCCGGT
GACGGCCGCTCAGATCGACGCCGCCTCCCACCCCGAGGAGAAGCGCGCCC
ATGCACAGGAGATCAACGCCCAGACGAAACAGGAACTCGCCGAGAAGGGC
GAGCTGGCTGAGGCGGAGACCTTGGTGCCCAAGGCGGCTCACGATGCTGT
TCCCGAGACGGAGAAATAAGCAATGAATATACCATATCAGACAGGATGGA
ATTGGAAAGATGCAGCATTGGAACATCGAAGAACAGGAAGCACATGTGAT
TGAATAAATAGAGAAGATGAGGGACATCGGATGTATACGATCGGGCAAGG
CAGTGTATTACTATATGCATGCATGATTTCTTTTTCAGCTCATATTTATA
CCCTCGTCCAGTCTCGTCTCTTCCCAATTTCTCTTTCATTCTACTTTCAA
TTGTTCGTGATATTCTTCTCCGCTCTCCTTTACCTCTTCGTCTCTGTCTC
TGTTCCAATCTCCAGTCTGGGCTTGACTTTGACTCATCTCATTGCTCTAT
CAGCATCTCCGACCATCTCTATATCCACTTTTCCTTTTCTTATTTTTTTT
CCTCATCCATTTTCTTTTCGAGTGATACTGTATCTAAGTAACTGCACCTG
TACTTGTACCTTTTCTTTTTCATGTTTAGCATCTCGGTCAAAAAGAGAGG
AGAGAGAGAGAGAGCGAAGTAGAATGAATAGACATAGAT
back to top

Coding sequence (CDS) from alignment at ch4:604698..606436-

>KJC3_004752-T1 ID=KJC3_004752-T1|Name=KJC3_004752-T1|organism=Aspergillus niger KJC3|type=CDS|length=2619bp|location=Sequence derived from alignment at ch4:604698..606436- (Aspergillus niger KJC3)
GGGCATGCAAGACTGCTTCAGACTACACCCCGACGTGTACGGTGCTGAGC
TCGAAGATGACGAGGAGGCTGCTCCCGCTGCTGCCGTCCCCGAGGCCGGT
GACGAGCAGCCGGTGACGGCCGCTCAGATCGACGCCGCCTCCCACCCCGA
GGAGAAGCGCGCCCATGCACAGGAGATCAACGCCCAGACGAAACAGGAAC
TCGCCGAGAAGGGCGAGCTGGCTGAGGCGGAGACCTTGGTGCCCAAGGCG
GCTCACGATGCTGTTCCCGAGACGGAGAAATAATCTCTCTTCTCTCGCAA
TCCAAGTCCGACTCCGTCGAAGCCGAATCCTCCCTCACCATCGACTCCAT
CAAGCCCAAGATCCGCGAACAGAAGAAGTCCTCGGCTCCTGCTCCCGCTC
CCACTCCTGCTCCTGCTGCCCCCGAAGCCCCTCAAGATGATGCGCAACAA
CCCTCCCCCGAAGCCGCTACGCTGAAGTCCCCCGAGGAGCTCGAGGCCGA
GGCCGGCCAGGAAGGCGCCTTCAACCCCGAGACCGGCGAGATTAACTGGG
ACTGCCCTTGCCTGGGCGGTATGGCCCACGGACCTTGCGGTGAGGAGTTC
AAGGCTGCTTTTAGCTGCTTTGTGTACTCCTCTGAGGAGCCTAAGGGTAT
TGACTGCATTGAGAAGTTCAAATGTTTCGCTCCGCACCTCGAGCTATCCT
CCGCGCACCGGCCGTCGCAGTCCGTGGCCCGGCTACCAGACGATTGATAA
GCACCAACACACCCGCCGACTCCAAGCCGAGGAGTTGGAAGAACACCGCT
GCCCGCCTGGGTCTGGCCATTGGCGCCGTCTACTACTACAACACGAGCCC
CTACTTCGCTCAAACCCCGTCCTGGGCATGCAAGACTGCTTCAGACTACA
CCCCGACGTGTACGGTGCTGAGCTCGAAGATGACGAGGAGGCTGCTCCCG
CTGCTGCCGTCCCCGAGGCCGGTGACGAGCAGCCGGTGACGGCCGCTCAG
ATCGACGCCGCCTCCCACCCCGAGGAGAAGCGCGCCCATGCACAGGAGAT
CAACGCCCAGACGAAACAGGAACTCGCCGAGAAGGGCGAGCTGGCTGAGG
CGGAGACCTTGGTGCCCAAGGCGGCTCACGATGCTGTTCCCGAGACGGAG
AAATAATCTCTCTTCTCTCGCAATCCAAGTCCGACTCCGTCGAAGCCGAA
TCCTCCCTCACCATCGACTCCATCAAGCCCAAGATCCGCGAACAGAAGAA
GTCCTCGGCTCCTGCTCCCGCTCCCACTCCTGCTCCTGCTGCCCCCGAAG
CCCCTCAAGATGATGCGCAACAACCCTCCCCCGAAGCCGCTACGCTGAAG
TCCCCCGAGGAGCTCGAGGCCGAGGCCGGCCAGGAAGGCGCCTTCAACCC
CGAGACCGGCGAGATTAACTGGGACTGCCCTTGCCTGGGCGGTATGGCCC
ACGGACCTTGCGGTGAGGAGTTCAAGGCTGCTTTTAGCTGCTTTGTGTAC
TCCTCTGAGGAGCCTAAGGGTATTGACTGCATTGAGAAGTTCAAATGTTT
CGCTCCGCACCTCGAGCTATCCTCCGCGCACCGGCCGTCGCAGTCCGTGG
CCCGGCTACCAGACGATTGATAAGCACCAACACACCCGCCGACTCCAAGC
CGAGGAGTTGGAAGAACACCGCTGCCCGCCTGGGTCTGGCCATTGGCGCC
GTCTACTACTACAACACGAGCCCCTACTTCGCTCAAACCCCGTCCTGGGC
ATGCAAGACTGCTTCAGACTACACCCCGACGTGTACGGTGCTGAGCTCGA
AGATGACGAGGAGGCTGCTCCCGCTGCTGCCGTCCCCGAGGCCGGTGACG
AGCAGCCGGTGACGGCCGCTCAGATCGACGCCGCCTCCCACCCCGAGGAG
AAGCGCGCCCATGCACAGGAGATCAACGCCCAGACGAAACAGGAACTCGC
CGAGAAGGGCGAGCTGGCTGAGGCGGAGACCTTGGTGCCCAAGGCGGCTC
ACGATGCTGTTCCCGAGACGGAGAAATAATCTCTCTTCTCTCGCAATCCA
AGTCCGACTCCGTCGAAGCCGAATCCTCCCTCACCATCGACTCCATCAAG
CCCAAGATCCGCGAACAGAAGAAGTCCTCGGCTCCTGCTCCCGCTCCCAC
TCCTGCTCCTGCTGCCCCCGAAGCCCCTCAAGATGATGCGCAACAACCCT
CCCCCGAAGCCGCTACGCTGAAGTCCCCCGAGGAGCTCGAGGCCGAGGCC
GGCCAGGAAGGCGCCTTCAACCCCGAGACCGGCGAGATTAACTGGGACTG
CCCTTGCCTGGGCGGTATGGCCCACGGACCTTGCGGTGAGGAGTTCAAGG
CTGCTTTTAGCTGCTTTGTGTACTCCTCTGAGGAGCCTAAGGGTATTGAC
TGCATTGAGAAGTTCAAATGTTTCGCTCCGCACCTCGAGCTATCCTCCGC
GCACCGGCCGTCGCAGTCCGTGGCCCGGCTACCAGACGATTGATAAGCAC
CAACACACCCGCCGACTCCAAGCCGAGGAGTTGGAAGAACACCGCTGCCC
GCCTGGGTCTGGCCATTGGCGCCGTCTACTACTACAACACGAGCCCCTAC
TTCGCTCAAACCCCGTCCT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004752KJC3_004752Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004752-T1KJC3_004752-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004752-T1.cdsKJC3_004752-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004752-T1.utr3p1KJC3_004752-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004752-T1.exon3KJC3_004752-T1.exon3Aspergillus niger KJC3exon
KJC3_004752-T1.exon2KJC3_004752-T1.exon2Aspergillus niger KJC3exon
KJC3_004752-T1.exon1KJC3_004752-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004752-T1.utr5p1KJC3_004752-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092651BA
DBxrefInterPro:IPR010625
DBxrefPFAM:PF06747
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:604698..606436 -
Powered by Drupal