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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:910172..911444+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004856-T1 ID=KJC3_004856-T1|Name=KJC3_004856-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1273bp|location=Sequence derived from alignment at ch4:910172..911444+ (Aspergillus niger KJC3)
CCAATCCTAATTATCCCAACCCTTGACCTTCCTAACCACCCTCCCCCCTT
TTATCCGACACAAAAGACAAAAAACCAAAACAATGACCTCCCACCGCGCC
GACGCCAGCACCTTCCTCGACAACCGAGGCTACAGCGGCCCCCTAGTCCG
CGGCGTGAACCCAGCGACTCTGTTCGAAAAAGCCGTTCGCGACCGCATCA
CCGACTCCTACTACTGGAAAGAGCAATGTTTCGGTCTCAACGCCGCGACG
CTCTGCGATCGCGCCGTGGAATTGACCTCCATCGGGGGTGTCTACGGCGT
ATCCGAAAAGCCATCCCCATTCCTATGTCTCGCATTCAAGCTCCTCCAAC
TCAACCCAGAGCGGGATATTATCCTCGAGTATTTGAATTTCAGCGATCCT
GCCAACGATGAAGATTCCACGGGACACGAAGAAAGAGAACACGATGATGG
TGTTGTGAAAGCACGCGGCGATTTCAAATACCTTCGCGCACTAGCGGCAT
TTTACGTGCGGTTGACGTTCGAGCCCGTGGAGGTGTACAAGACGCTGGAA
CCGCTGTTGTTGGATTATCGGAAGTTGAAGAGGCGGGTGCGGGATTCGTT
TACGTTGACGTATATGGATCAGTTTGTGGATGAGTTGTTGACGAAGGAGA
GAGTTTGTGGTACGAGTTTGTGGAAGTTGCCTGCTAGGCAGGTTTTGGAG
GATTTGGATCTGTTGGAGGTCAGGATTAGTCCGTTGCAGGATGAGTTGGA
GGAGATGGAGAGAAGTGACCGGGAGGAGGAGGATGATGATGAGAAGGATG
ATGCGGATGAGGGGAGTGAGGAGGGGGAAAGGCAGGGTGATGATTGAGGT
ATCGGCTTGGTGTGTGGTGATTTTTAACCTCTTTTCTGAGCCTGGGAATT
GCGGTGCGGCTGAGCTGGTTTATTGGCCTGAGGACGCAAGCAGAATGCTG
CGCAAAAGCCTGGATCCCTGAGGCTGTCGGTTAGACGGTGCGGGATTGAT
GACTATCAGATCCATGTGGTGGTCCACAGGTTGTGCTGTCTAGCACCTAC
TCTCGCTGCTGATTTGCAGCCATTCGGGACCGCTCCAGCGATATCTACGT
TCGGTGAAACGATACGTAAAGTGACAGGCTACTGCTGCAGCTACGGATGT
ACGCACCTGGTCAGTACTCGGTCCTCGTGGGATCTATTGAGTAGATTGCT
CAATTTCAGAATGCGCTAAGATAGCCTCCATTAAAACACAGTCTTAGCCT
CCATTGAAGCACAACGCATGGCA back to topCoding sequence (CDS) from alignment at ch4:910172..911444+ >KJC3_004856-T1 ID=KJC3_004856-T1|Name=KJC3_004856-T1|organism=Aspergillus niger KJC3|type=CDS|length=765bp|location=Sequence derived from alignment at ch4:910172..911444+ (Aspergillus niger KJC3)
ATGACCTCCCACCGCGCCGACGCCAGCACCTTCCTCGACAACCGAGGCTA
CAGCGGCCCCCTAGTCCGCGGCGTGAACCCAGCGACTCTGTTCGAAAAAG
CCGTTCGCGACCGCATCACCGACTCCTACTACTGGAAAGAGCAATGTTTC
GGTCTCAACGCCGCGACGCTCTGCGATCGCGCCGTGGAATTGACCTCCAT
CGGGGGTGTCTACGGCGTATCCGAAAAGCCATCCCCATTCCTATGTCTCG
CATTCAAGCTCCTCCAACTCAACCCAGAGCGGGATATTATCCTCGAGTAT
TTGAATTTCAGCGATCCTGCCAACGATGAAGATTCCACGGGACACGAAGA
AAGAGAACACGATGATGGTGTTGTGAAAGCACGCGGCGATTTCAAATACC
TTCGCGCACTAGCGGCATTTTACGTGCGGTTGACGTTCGAGCCCGTGGAG
GTGTACAAGACGCTGGAACCGCTGTTGTTGGATTATCGGAAGTTGAAGAG
GCGGGTGCGGGATTCGTTTACGTTGACGTATATGGATCAGTTTGTGGATG
AGTTGTTGACGAAGGAGAGAGTTTGTGGTACGAGTTTGTGGAAGTTGCCT
GCTAGGCAGGTTTTGGAGGATTTGGATCTGTTGGAGGTCAGGATTAGTCC
GTTGCAGGATGAGTTGGAGGAGATGGAGAGAAGTGACCGGGAGGAGGAGG
ATGATGATGAGAAGGATGATGCGGATGAGGGGAGTGAGGAGGGGGAAAGG
CAGGGTGATGATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004856-T1.utr5p1 | KJC3_004856-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR005037 |
| DBxref | PFAM:PF03371 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:910172..911444 + |
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