You are here

Home

KJC3_004946-T1, KJC3_004946-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004946-T1
Unique NameKJC3_004946-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1187743..1190175-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004946-T1 ID=KJC3_004946-T1|Name=KJC3_004946-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2433bp|location=Sequence derived from alignment at ch4:1187743..1190175- (Aspergillus niger KJC3)
ATGGCTGCAAAAAGAGTCTCGGACAACGGTCCGAAAGATGCCTCCAACTT
ACCACCACGATCTCTAAGGAAGCGAAGAGATAAAGGAGAAGACAAGTCTC
CTAGCAAAATATCCAAGACGAGTCCCCCGGCTCCAACCAGAACAGTGCGA
TCCCGAGCGAAGCAGAGGCAAGAAGAAGAAGACACAATTTGTTCTCCTAG
CAAACGGCCCAACAAGAGTTCCCCCATCCCATCCCAGCCATCACGAACCC
AGAAGAAGCGGGGGCAAGAAGGAGGAGATGCAGACAGCTACCCTAGCAAA
AAGTCCAAGACGAGTTCCCCAGCTTCGTCCCAAACATCGCAATCCCTGGA
GGAGCGGAGACAAGAAGAAGAAGAACAAGAACAAGAAGAAGAAGCCGACA
GCTCTCCTAGCAAACGGCCCGGTACAACTCCTCCCAATCTATCCCAACCC
CTACAATTAGGGGAGGAGCGGAGGGAGGAAGGGGAAGACAATGCAGACAG
CTCTCCTGGCGAACGACCCAAGACGAGTTCTCCCGCTCCAGCCCGGCCGT
CAGGATCCCAGAGGAAGCGGGGACAAGAAGGAGAAGGTGCAGAGAATACT
CCTAACAAACGACCCAAGACGGGCACCTTTCAGCCCCTCTCAATATACAC
GGAATTTATACAGGATAGAGACCAGATTCTGCATGCGATCATGTACGACT
TATATGATGTCAACAAAATATACAACGACCGTCAAAAAAACAAGGTGGCA
AGGTTGGACTACGAAGCGCGGTGTATCTACGCATCACGGGCCTTAGAGAA
GGCCATTACTTGCAGATCATGGTCATGGGATGAGGCCAATATGGATTGCG
AGGAGCGGGAAGCGAGCCGACTACGATTCTTCGCTGAAAAAATCGGCTGG
CCCATGCTTGCGATATGTGTGCAAGCGGAAGCCTTTCGAAGGCTTTGTCA
AGAAGAAAGCACACCAATGTGGCAATCTGTATGGAGAAGACTGCAAGGGT
ACGTGTATAATATCTGGATTCAGGCTCACTCGCGCGGTTTTGAGTGGCGC
AGTTTGTTGGAGCCATACGCGGGGGTTGATGCTCCGCGCGGGTTCAACCA
GGCATTGGCTCACAGAAGTGGAGTGGATGGGCTCAGATATACGCATCCTC
ACGAAATTGTCGTAGATGAAGGGGTCAAAACAGTTCGCCCACCGATATTC
CGAGATCGTTTACAGAAACATGTTGAATTTAGCACCTTTGACCCCAAGGA
TTGGGAAACGGCGACGGATCCAGAGCATCGAGGCCTGAAAAAGGATCCGA
CGCTGCGAAAGGACCTTAACCATGGCCTTTGCGATCTTTGCGCCGCAGGG
AAAATTTGCGAATGTCAAATTAAGAAGGCGCCCTTTGAGTTCGTGCAGCT
GGTGCAAACCACTATGGGCGTCGGGGTACGTGCTCTTGCGCAATTTGAGA
AAGGAGATATCCTGGCCGAATTTGTTGGCCCACTCCATCCACCTTGCTAT
ATAGGTGACCCTGTTTATGCGCTTACAATGCAGGGCAAAGTCAGAGTAAA
GGAGGAGATTGCTCTGATTTGCCCAATGGAATTTGGGAACTTCACTCGGT
TTATTAACCACTCGTGCAGGGCTAATACAACTTTTGAGCGCCGGACAATT
GGGGACCGGGCAATGATGACCGTTGAGGCCTTGCGGGATATCCAACCTTT
CGAGGAACTCACAGTCAACTATGGCCGGGCTTATTGGAAAGGGCGGACTT
GCGAGTGTGGAGAGGAAGGGTGTTACACTAAGCAAGAGGAGAGGAAAAAA
CAGCAACGAGAACGAGAAATGGAAAGGCGAAAGCAAAGGGACATGCAACT
CGAAGCATCCAAGAATGTTGCAACGGAAGAGGATGGAGATACAGAAGAAT
ATTCAGACGAGGAAGATGAAGAAGAAGATACAGATGAAGAAGAAGATACA
GATGAAGAAGAGACAGATGAAGAAGGAGAGGTCGAAGAAGGGCCACCGAA
GAAGAAACCCGAAGAAGAGAAAGCCCCATCAAAGAAGGGATCAAAAGAAG
GATCATCTCTAGGAGCAGCAGAAGGGCCATCAAAGGGAAAGCCCAAAGGA
AAGAAAGCATTAGCAAAAGACGGGCCAGGAAAAGAAAGGGCAGAGGAAGA
GAGAGCAGCACGAGTAATAAATCAAGAGTGGGATCCTATTCTCGAAGACT
ATACTGATAACTCTGGTTGTGAAGGTGAAGAAGTAGAAAGGGCAAGAGGA
AAAGCAAAAGAAAAAGAGAAAGAAAAAGGAAAAGGAAAGAGGAAAGAAAA
GGAGAAAGAAAAAGACGCAGAAGAACAAGAAGAATCGACGGAAGAATCAT
CATCATCATCAGAAGAGTCAGATGAATCTTCTTACGTGTTGGTCGAGGAG
GAGGAAGAAGAAGATAGAGGTAAAGAAGACTAA
back to top

Coding sequence (CDS) from alignment at ch4:1187743..1190175-

>KJC3_004946-T1 ID=KJC3_004946-T1|Name=KJC3_004946-T1|organism=Aspergillus niger KJC3|type=CDS|length=2433bp|location=Sequence derived from alignment at ch4:1187743..1190175- (Aspergillus niger KJC3)
ATGGCTGCAAAAAGAGTCTCGGACAACGGTCCGAAAGATGCCTCCAACTT
ACCACCACGATCTCTAAGGAAGCGAAGAGATAAAGGAGAAGACAAGTCTC
CTAGCAAAATATCCAAGACGAGTCCCCCGGCTCCAACCAGAACAGTGCGA
TCCCGAGCGAAGCAGAGGCAAGAAGAAGAAGACACAATTTGTTCTCCTAG
CAAACGGCCCAACAAGAGTTCCCCCATCCCATCCCAGCCATCACGAACCC
AGAAGAAGCGGGGGCAAGAAGGAGGAGATGCAGACAGCTACCCTAGCAAA
AAGTCCAAGACGAGTTCCCCAGCTTCGTCCCAAACATCGCAATCCCTGGA
GGAGCGGAGACAAGAAGAAGAAGAACAAGAACAAGAAGAAGAAGCCGACA
GCTCTCCTAGCAAACGGCCCGGTACAACTCCTCCCAATCTATCCCAACCC
CTACAATTAGGGGAGGAGCGGAGGGAGGAAGGGGAAGACAATGCAGACAG
CTCTCCTGGCGAACGACCCAAGACGAGTTCTCCCGCTCCAGCCCGGCCGT
CAGGATCCCAGAGGAAGCGGGGACAAGAAGGAGAAGGTGCAGAGAATACT
CCTAACAAACGACCCAAGACGGGCACCTTTCAGCCCCTCTCAATATACAC
GGAATTTATACAGGATAGAGACCAGATTCTGCATGCGATCATGTACGACT
TATATGATGTCAACAAAATATACAACGACCGTCAAAAAAACAAGGTGGCA
AGGTTGGACTACGAAGCGCGGTGTATCTACGCATCACGGGCCTTAGAGAA
GGCCATTACTTGCAGATCATGGTCATGGGATGAGGCCAATATGGATTGCG
AGGAGCGGGAAGCGAGCCGACTACGATTCTTCGCTGAAAAAATCGGCTGG
CCCATGCTTGCGATATGTGTGCAAGCGGAAGCCTTTCGAAGGCTTTGTCA
AGAAGAAAGCACACCAATGTGGCAATCTGTATGGAGAAGACTGCAAGGGT
ACGTGTATAATATCTGGATTCAGGCTCACTCGCGCGGTTTTGAGTGGCGC
AGTTTGTTGGAGCCATACGCGGGGGTTGATGCTCCGCGCGGGTTCAACCA
GGCATTGGCTCACAGAAGTGGAGTGGATGGGCTCAGATATACGCATCCTC
ACGAAATTGTCGTAGATGAAGGGGTCAAAACAGTTCGCCCACCGATATTC
CGAGATCGTTTACAGAAACATGTTGAATTTAGCACCTTTGACCCCAAGGA
TTGGGAAACGGCGACGGATCCAGAGCATCGAGGCCTGAAAAAGGATCCGA
CGCTGCGAAAGGACCTTAACCATGGCCTTTGCGATCTTTGCGCCGCAGGG
AAAATTTGCGAATGTCAAATTAAGAAGGCGCCCTTTGAGTTCGTGCAGCT
GGTGCAAACCACTATGGGCGTCGGGGTACGTGCTCTTGCGCAATTTGAGA
AAGGAGATATCCTGGCCGAATTTGTTGGCCCACTCCATCCACCTTGCTAT
ATAGGTGACCCTGTTTATGCGCTTACAATGCAGGGCAAAGTCAGAGTAAA
GGAGGAGATTGCTCTGATTTGCCCAATGGAATTTGGGAACTTCACTCGGT
TTATTAACCACTCGTGCAGGGCTAATACAACTTTTGAGCGCCGGACAATT
GGGGACCGGGCAATGATGACCGTTGAGGCCTTGCGGGATATCCAACCTTT
CGAGGAACTCACAGTCAACTATGGCCGGGCTTATTGGAAAGGGCGGACTT
GCGAGTGTGGAGAGGAAGGGTGTTACACTAAGCAAGAGGAGAGGAAAAAA
CAGCAACGAGAACGAGAAATGGAAAGGCGAAAGCAAAGGGACATGCAACT
CGAAGCATCCAAGAATGTTGCAACGGAAGAGGATGGAGATACAGAAGAAT
ATTCAGACGAGGAAGATGAAGAAGAAGATACAGATGAAGAAGAAGATACA
GATGAAGAAGAGACAGATGAAGAAGGAGAGGTCGAAGAAGGGCCACCGAA
GAAGAAACCCGAAGAAGAGAAAGCCCCATCAAAGAAGGGATCAAAAGAAG
GATCATCTCTAGGAGCAGCAGAAGGGCCATCAAAGGGAAAGCCCAAAGGA
AAGAAAGCATTAGCAAAAGACGGGCCAGGAAAAGAAAGGGCAGAGGAAGA
GAGAGCAGCACGAGTAATAAATCAAGAGTGGGATCCTATTCTCGAAGACT
ATACTGATAACTCTGGTTGTGAAGGTGAAGAAGTAGAAAGGGCAAGAGGA
AAAGCAAAAGAAAAAGAGAAAGAAAAAGGAAAAGGAAAGAGGAAAGAAAA
GGAGAAAGAAAAAGACGCAGAAGAACAAGAAGAATCGACGGAAGAATCAT
CATCATCATCAGAAGAGTCAGATGAATCTTCTTACGTGTTGGTCGAGGAG
GAGGAAGAAGAAGATAGAGGTAAAGAAGACTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004946KJC3_004946Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004946-T1.cdsKJC3_004946-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004946-T1.exon1KJC3_004946-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004946-T1KJC3_004946-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR001214
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1187743..1190175 -
Powered by Drupal