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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1197771..1199580- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004952-T1 ID=KJC3_004952-T1|Name=KJC3_004952-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1810bp|location=Sequence derived from alignment at ch4:1197771..1199580- (Aspergillus niger KJC3)
CTGCTATCATTACTACTCTATACGAACACAGCTTGAGATATGTTAAGGCA
TAATATCTGGTCTTGAGGAAACCCGTGTTCATTTTCTGCTCACTCTGTCA
TTTCTTCCATGGCCTACAGCTTGCCGCCCTTGCTGATGATGTTTGCCGGC
TTTCGGTGCTTACTATATATACTAACACTACTAGTATCGACGCTGCGCTA
TCACGACGGTGACCATTCATTCACAGGCCAATAATCACACCAATCGCAAT
AACAACAACCACCACAATGGTGCTGGTTAAGGACACACAAAGCAACAGAC
ACCAACCAAAGCCATTACCATAATCACCATAACGCAGTGCACCAAAATCC
CATCCAAGCAACACAGAACCCACAATGCCAGCAGAGGTTCATACTCACAC
CGTCAGCACGCCACATGCGGCTGGTCGAGAACAAAATTCGAAAGCAGAAG
CACGCAGCAATAGTCAATGCACGGTCGGTGTCTCCGCTGTGTCCATGCGG
ACGCACGAGAGAGGTCACCTAGCATGTGTCACACAACAGGCACCTGTGGG
AAGTGAGGTATCAAAGAACATCGACGGCATATATATACTACCAGCGGGAA
CATCTTCCTGCAGGGTATATCGCTGACACTTCAGCAGGAAAGCACCCTCA
ACAGAAGTCCAAGGATACCTCGCTGAGGCCACTGCTCTCCGATATGATAC
CTCACGATCGGTATGGCGAAGTCACCAATACCACAAAGAACAAGAATCCC
TGCCAACACCGTGCAAGGCAGGAGCGCCCACGCCATGTGTATGCCTTTTC
CATCCCGAGCTTCCATACAGCACCCTTCCTACCCCCAGATCGCACCAATT
GCCCCCACACATGCAAAAAGAGCACAGCCAGCCACATCCTGCAATCCTAA
TCTAACCACGCACTTCCCCACCCACTGCTCGGATAGCACCCTTACTTAGG
TGAGCCCCAGCATACACAGCAGGCCTTCCTTGAGCCAATTACCCCGCGTC
GATACTGACTCAGTTAAGGTGACCAACCAATTACGAAGCAAACCCCCTAG
TCTAAGTATACCAACGTGTATCGTCAATTGGCCCAACGTTGTCCTCCCTA
GCAGACACTATTTCTTGCCCACACCTGCTGTATAACCACCCGCTGCCCAC
CATCACGGACATAACTCGGCGCTGCTAATATACAGCTACAACCAAAAAAG
GGCCTGCGACGGCCATCAATGATTGAAACATACAAGAGAATTCTTGGGAC
ATTGCTCCATCCCGGGACCTCGACTGAAAACAAAGAAACAATAAGGCTCC
TTGCATACCATTCGAGGCTGGCGCACGGTGTCTCGATCCATATCAAGGGC
TGCCGGCACCCAGCAAAACCCTACACAAAGTCACAAAGAGACCAGGAGAA
GGTAGGGAACAGGCAAAAGTTAGCCACAAACCGCAGCAAAGTATGCAAGA
GATCCCTGAATCTCCAACTTAATTCCTATACCCCATCTTACAACCGGCGC
AGAAGCTTATTGCTGGTAGATCACAAGACCCGAAATATCTCGCATGTGGC
GGTAACATTTCGCAAGGCAGCTGACCAATGACCACTTACTCCAGCTGGAA
AAAAAAGTGTACCTTCATCATCAGCACCACCCTAGAGAGATGGGCTAATA
TAGAAGTGACGGGGGCAAAAAGTGAAAGGGCAAAAAATGCTTCCACGCGG
ATTCGAACCGCGGACCTCATGATTACTAGTCATGCGCTCTACCAACTGAG
CCATAGAAGCTAGTTGTTATTAAAGGGCTGCTAGCTTCCTGTAATATTGA
GACAGCCAGC back to topCoding sequence (CDS) from alignment at ch4:1197771..1199580- >KJC3_004952-T1 ID=KJC3_004952-T1|Name=KJC3_004952-T1|organism=Aspergillus niger KJC3|type=CDS|length=516bp|location=Sequence derived from alignment at ch4:1197771..1199580- (Aspergillus niger KJC3)
ATCACAAGACCCGAAATATCTCGCATGTGGCGGTAAATGATTGAAACATA
CAAGAGAATTCTTGGGACATTGCTCCATCCCGGGACCTCGACTGAAAACA
AAGAAACAATAAGGCTCCTTGCATACCATTCGAGGCTGGCGCACGGTGTC
TCGATCCATATCAAGGGCTGCCGGCACCCAGCAAAACCCTACACAAAGTC
ACAAAGAGACCAGGAGAAGGTAGGGAACAGGCAAAAGTTAGCCACAAACC
GCAGCAAAATCACAAGACCCGAAATATCTCGCATGTGGCGGTAAATGATT
GAAACATACAAGAGAATTCTTGGGACATTGCTCCATCCCGGGACCTCGAC
TGAAAACAAAGAAACAATAAGGCTCCTTGCATACCATTCGAGGCTGGCGC
ACGGTGTCTCGATCCATATCAAGGGCTGCCGGCACCCAGCAAAACCCTAC
ACAAAGTCACAAAGAGACCAGGAGAAGGTAGGGAACAGGCAAAAGTTAGC
CACAAACCGCAGCAAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004952-T1.utr3p1 | KJC3_004952-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1197771..1199580 - |
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