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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1804319..1806433+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005174-T2 ID=KJC3_005174-T2|Name=KJC3_005174-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2115bp|location=Sequence derived from alignment at ch4:1804319..1806433+ (Aspergillus niger KJC3)
TATCAAAGCACATTCTCCTTGCCACATTAGCATCCAGTCAGGCTTGGGCT
CATGGGGGTAGCCGTATGCTCAAATAGTTCCTCTTACCTCCTCTGACCTC
TGCGCACTCTCTGGTTTGGGATCCTTGGGCTCATTGGGCTCAAATTTCTT
TCTGTGTGTGTTCCATTAGCCGGCAACCCCTCGCTCATTCTGCATTGCAA
ATAGAGGGGTGATATCACGCACAGACGGAAAGGCCCCTTTTAACCGAACT
GTCTACGGTAGCTCGATACCCCTTCTATCATTGGGAGGGCGGTAAAAATG
AGGTCGTCTGCCGATTTAGACATAGAAAAGACGGAAGGAAACCGTGCAAT
TAAGAACATCCCAGGCTTGCCTGGTTTTCATGGTACAAATTCTCCCCAGG
CTGGAGAAAAGGTCCTGGATGGTACAACCGACAGTCGTGAGTATCGTGAA
TATCATGATGCAAGTCCAGCCATCAACATGACGGAGGAACAGTCTCATAC
CGGGGTCCAACACGATAGCAACGTACCGCAGGCAGAGACTATGCTTGAAG
ATGGCCTTCAGAGACCCTCGTCTGGAGCGTCTGACTCAGAGAGCTTCGCA
CACAGCGCCCCAATGTCTCGAGTCACAACGGATGCAGATGGAAACACATA
TCCTGAAGGCGGACTAGAGGCCTGGCTGGTTGTCTTTGGTAGTTTCATGG
GTCTCTTTGGCTCCCTCGGCTTAGTGAACACCATTGGAACTTTCCAGGCC
TATATTGAGGATCACCAGCTCAAAGACTACAGCTCTGGAACTACAGGCTG
GATTTTTGGCATGTACGCGTTTTTGACCTTTTTCTGCGGTGTACAGATAG
GTCCAGTCTTCGACGCCAAAGGTCCACGATTCTTGGTGTTTTCGGGTGCT
GTGTTGGTCATCGTCATGATGGTAGCTTTGGGTTTCTGCACTCAATATTG
GCACTTCATGCTGGTCATCGGTATCGCTGGAGGAGTCGGAGCCTCCTTGA
TCTTCACCCCCGCAATAGCCGCGATTGGCCACTTCTTCAATGAGAAACGT
GGCGTTGCCACTGGCATTGCTGCCACAGGTGGCTCCGTAGGAGGTGTTGT
CTTCCCGCTTACCTTGGAGGCATTGTTCCCCAAGATAGGTTTTGCATGGG
CAACCCGGGTAGTTGCGCTTCTTTGCCTCATCTCAGTGGCCGTTGCATGT
TTGTTGATCAAGTCCCGGTTGCCTAAAAAGCCCGCCGTAAAGGAGAACAT
GATGCCTGATTTTCGTATCTTCCGGGAACCAAAATTTGCTCTTACCACTG
CCGGCGTTTTCTTCATCGAATGGGGCCTTTTCATTCCAATCAGTTACATC
TCCTCCTACGCCTTGGCTCATGGCGTTTCCTCCCAGTTCTCGTACCAGAT
CCTGGCGATCCTCAATGCGGGTTCCTTCTTCGGAAGAGGAATCCCTGGGT
TTGTGGCTGATTATCTGGGACGGTTCAATACGCTCATCGTCACGGTTGCT
TTATGCCTCATCTGCAACGCATGTCTGTGGCTTCCGGCCGGCAACAGTGT
ACCTGTCATGGTTGTGTACTGCGTTATTTTTGGTTTTGCAAGCGGCAGCA
ACATCAGTCTGACTCCTGTTTGCATTTCTCAGCTGTGCAAGATCGAGAAT
TACGGCAGGTACTATGCTACTGCGTACACGATTGTGAGTTTTGGGTAGGT
TTCCATGTAGCTGTCAGGGTTCTACAAGTATGAGCTAACAACGTACAAGC
ACCCTTACGGGCATTCCAATTGCGGGAGAGATCCTGTCCCGATGCAATGG
CGAGTATTGGGGCTTGATTACCTTCACAACTTGCTGCTATGCTCTTGGCC
TCGTCTGCGTCACGTTGGTCAAGGTAATCCACGTTGGCTGGCGTCACCCA
CTAGCGATATACTGAGGGAATAACATCCGATTCGGGCGTCCATGACTATT
TATGCGACAAAATGAGCAATTCACCTGCCGCTACTGATGAAAGAAACAAC
AAAACTTACTCACTATTGTCTAATAGACTCACGAATCTAACGACCCCCAT
AACATGTCAAGACATGGAATCTAGAGCGGTCTGAACATGGTACCGTCAAA
ATCTTAGCTTAAGCC back to topCoding sequence (CDS) from alignment at ch4:1804319..1806433+ >KJC3_005174-T2 ID=KJC3_005174-T2|Name=KJC3_005174-T2|organism=Aspergillus niger KJC3|type=CDS|length=4275bp|location=Sequence derived from alignment at ch4:1804319..1806433+ (Aspergillus niger KJC3)
ATGGTACAAATTCTCCCCAGGCTGGAGAAAAGGTCCTGGATGGTACAACC
GACAGTCTCTCATACCGGGGTCCAACACGATAGCAACGTACCGCAGGCAG
AGACTATGCTTGAAGATGGCCTTCAGAGACCCTCGTCTGGAGCGTCTGAC
TCAGAGAGCTTCGCACACAGCGCCCCAATGTCTCGAGTCACAACGGATGC
AGATGGAAACACATATCCTGAAGGCGGACTAGAGGCCTGGCTGGTTGTCT
TTGGTAGTTTCATGGGTCTCTTTGGCTCCCTCGGCTTAGTGAACACCATT
GGAACTTTCCAGGCCTATATTGAGGATCACCAGCTCAAAGACTACAGCTC
TGGAACTACAGGCTGGATTTTTGGCATGTACGCGTTTTTGACCTTTTTCT
GCGGTGTACAGATAGGTCCAGTCTTCGACGCCAAAGGTCCACGATTCTTG
GTGTTTTCGGGTGCTGTGTTGGTCATCGTCATGATGGTAGCTTTGGGTTT
CTGCACTCAATATTGGCACTTCATGCTGGTCATCGGTATCGCTGGAGGAG
TCGGAGCCTCCTTGATCTTCACCCCCGCAATAGCCGCGATTGGCCACTTC
TTCAATGAGAAACGTGGCGTTGCCACTGGCATTGCTGCCACAGGTGGCTC
CGTAGGAGGTGTTGTCTTCCCGCTTACCTTGGAGGCATTGTTCCCCAAGA
TAGGTTTTGCATGGGCAACCCGGGTAGTTGCGCTTCTTTGCCTCATCTCA
GTGGCCGTTGCATGTTTGTTGATCAAGTCCCGGTTGCCTAAAAAGCCCGC
CGTAAAGGAGAACATGATGCCTGATTTTCGTATCTTCCGGGAACCAAAAT
TTGCTCTTACCACTGCCGGCGTTTTCTTCATCGAATGGGGCCTTTTCATT
CCAATCAGTTACATCTCCTCCTACGCCTTGGCTCATGGCGTTTCCTCCCA
GTTCTCGTACCAGATCCTGGCGATCCTCAATGCGGGTTCCTTCTTCGGAA
GAGGAATCCCTGGGTTTGTGGCTGATTATCTGGGACGGTTCAATACGCTC
ATCGTCACGGTTGCTTTATGCCTCATCTGCAACGCATGTCTGTGGCTTCC
GGCCGGCAACAGTGTACCTGTCATGGTTGTGTACTGCGTTATTTTTGGTT
TTGCAAGCGGCAGCAACATCAGTCTGACTCCTGTTTGCATTTCTCAGCTG
TGCAAGATCGAGAATTACGGCAGGTACTATGCTACTGCGTACACGATTGT
GAGTTTTGGCACCCTTACGGGCATTCCAATTGCGGGAGAGATCCTGTCCC
GATGCAATGGCGAGTATTGGGGCTTGATTACCTTCACAACTTGCTGCTAT
GCTCTTGGCCTCGTCTGCGTCACGTTGGTCAAGGTAATCCACGTTGGCTG
GCGTCACCCACTAGCGATATACTGAATGGTACAAATTCTCCCCAGGCTGG
AGAAAAGGTCCTGGATGGTACAACCGACAGTCTCTCATACCGGGGTCCAA
CACGATAGCAACGTACCGCAGGCAGAGACTATGCTTGAAGATGGCCTTCA
GAGACCCTCGTCTGGAGCGTCTGACTCAGAGAGCTTCGCACACAGCGCCC
CAATGTCTCGAGTCACAACGGATGCAGATGGAAACACATATCCTGAAGGC
GGACTAGAGGCCTGGCTGGTTGTCTTTGGTAGTTTCATGGGTCTCTTTGG
CTCCCTCGGCTTAGTGAACACCATTGGAACTTTCCAGGCCTATATTGAGG
ATCACCAGCTCAAAGACTACAGCTCTGGAACTACAGGCTGGATTTTTGGC
ATGTACGCGTTTTTGACCTTTTTCTGCGGTGTACAGATAGGTCCAGTCTT
CGACGCCAAAGGTCCACGATTCTTGGTGTTTTCGGGTGCTGTGTTGGTCA
TCGTCATGATGGTAGCTTTGGGTTTCTGCACTCAATATTGGCACTTCATG
CTGGTCATCGGTATCGCTGGAGGAGTCGGAGCCTCCTTGATCTTCACCCC
CGCAATAGCCGCGATTGGCCACTTCTTCAATGAGAAACGTGGCGTTGCCA
CTGGCATTGCTGCCACAGGTGGCTCCGTAGGAGGTGTTGTCTTCCCGCTT
ACCTTGGAGGCATTGTTCCCCAAGATAGGTTTTGCATGGGCAACCCGGGT
AGTTGCGCTTCTTTGCCTCATCTCAGTGGCCGTTGCATGTTTGTTGATCA
AGTCCCGGTTGCCTAAAAAGCCCGCCGTAAAGGAGAACATGATGCCTGAT
TTTCGTATCTTCCGGGAACCAAAATTTGCTCTTACCACTGCCGGCGTTTT
CTTCATCGAATGGGGCCTTTTCATTCCAATCAGTTACATCTCCTCCTACG
CCTTGGCTCATGGCGTTTCCTCCCAGTTCTCGTACCAGATCCTGGCGATC
CTCAATGCGGGTTCCTTCTTCGGAAGAGGAATCCCTGGGTTTGTGGCTGA
TTATCTGGGACGGTTCAATACGCTCATCGTCACGGTTGCTTTATGCCTCA
TCTGCAACGCATGTCTGTGGCTTCCGGCCGGCAACAGTGTACCTGTCATG
GTTGTGTACTGCGTTATTTTTGGTTTTGCAAGCGGCAGCAACATCAGTCT
GACTCCTGTTTGCATTTCTCAGCTGTGCAAGATCGAGAATTACGGCAGGT
ACTATGCTACTGCGTACACGATTGTGAGTTTTGGCACCCTTACGGGCATT
CCAATTGCGGGAGAGATCCTGTCCCGATGCAATGGCGAGTATTGGGGCTT
GATTACCTTCACAACTTGCTGCTATGCTCTTGGCCTCGTCTGCGTCACGT
TGGTCAAGGTAATCCACGTTGGCTGGCGTCACCCACTAGCGATATACTGA
ATGGTACAAATTCTCCCCAGGCTGGAGAAAAGGTCCTGGATGGTACAACC
GACAGTCTCTCATACCGGGGTCCAACACGATAGCAACGTACCGCAGGCAG
AGACTATGCTTGAAGATGGCCTTCAGAGACCCTCGTCTGGAGCGTCTGAC
TCAGAGAGCTTCGCACACAGCGCCCCAATGTCTCGAGTCACAACGGATGC
AGATGGAAACACATATCCTGAAGGCGGACTAGAGGCCTGGCTGGTTGTCT
TTGGTAGTTTCATGGGTCTCTTTGGCTCCCTCGGCTTAGTGAACACCATT
GGAACTTTCCAGGCCTATATTGAGGATCACCAGCTCAAAGACTACAGCTC
TGGAACTACAGGCTGGATTTTTGGCATGTACGCGTTTTTGACCTTTTTCT
GCGGTGTACAGATAGGTCCAGTCTTCGACGCCAAAGGTCCACGATTCTTG
GTGTTTTCGGGTGCTGTGTTGGTCATCGTCATGATGGTAGCTTTGGGTTT
CTGCACTCAATATTGGCACTTCATGCTGGTCATCGGTATCGCTGGAGGAG
TCGGAGCCTCCTTGATCTTCACCCCCGCAATAGCCGCGATTGGCCACTTC
TTCAATGAGAAACGTGGCGTTGCCACTGGCATTGCTGCCACAGGTGGCTC
CGTAGGAGGTGTTGTCTTCCCGCTTACCTTGGAGGCATTGTTCCCCAAGA
TAGGTTTTGCATGGGCAACCCGGGTAGTTGCGCTTCTTTGCCTCATCTCA
GTGGCCGTTGCATGTTTGTTGATCAAGTCCCGGTTGCCTAAAAAGCCCGC
CGTAAAGGAGAACATGATGCCTGATTTTCGTATCTTCCGGGAACCAAAAT
TTGCTCTTACCACTGCCGGCGTTTTCTTCATCGAATGGGGCCTTTTCATT
CCAATCAGTTACATCTCCTCCTACGCCTTGGCTCATGGCGTTTCCTCCCA
GTTCTCGTACCAGATCCTGGCGATCCTCAATGCGGGTTCCTTCTTCGGAA
GAGGAATCCCTGGGTTTGTGGCTGATTATCTGGGACGGTTCAATACGCTC
ATCGTCACGGTTGCTTTATGCCTCATCTGCAACGCATGTCTGTGGCTTCC
GGCCGGCAACAGTGTACCTGTCATGGTTGTGTACTGCGTTATTTTTGGTT
TTGCAAGCGGCAGCAACATCAGTCTGACTCCTGTTTGCATTTCTCAGCTG
TGCAAGATCGAGAATTACGGCAGGTACTATGCTACTGCGTACACGATTGT
GAGTTTTGGCACCCTTACGGGCATTCCAATTGCGGGAGAGATCCTGTCCC
GATGCAATGGCGAGTATTGGGGCTTGATTACCTTCACAACTTGCTGCTAT
GCTCTTGGCCTCGTCTGCGTCACGTTGGTCAAGGTAATCCACGTTGGCTG
GCGTCACCCACTAGCGATATACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005174-T2.utr5p1 | KJC3_005174-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005174-T2.utr3p1 | KJC3_005174-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1804319..1806433 + |
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