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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1914804..1916060- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005207-T1 ID=KJC3_005207-T1|Name=KJC3_005207-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1257bp|location=Sequence derived from alignment at ch4:1914804..1916060- (Aspergillus niger KJC3)
ATGGCCTACCACAAGCGCCCCACATCGAGCTACCAGCCCTGCGATACTTT
CTTCGTCGAGACCTACGACGAGTTCCCTGCCCCCCGTATGGATCCGAAAG
AACACGCCAAGTTGATGGCTCGTGAGCGTCAGTACGCCATGGCGGAACAG
CTGTCAAAGATTACCAGCGAGGAATTCCGTGACGACGTTCTGGCGCACAT
GCTGGACATGGATGCTGCTACGCTTCCGGACGTCGAGTCGATCGATATCC
AGACCGAGATCCAGTGGTTCATGCGTCCATACCTGCTCGACTTCTTGATT
GAAGCCCACACTGCATTCCAGCTATTGCCATCGACCCTCTTCCTCACCAT
CAACCTTCTTGACCGTTACTGCTCCAAGCGTGTCGTCTACAAGAGACACT
ATCAACTCGTTGGATGTGCTGCCTTGCTCATCGCAGCCAAGTATGGCGAC
AAGAAGGACCGCGTGCCTACCATCAAGGAGCTCAAGTCGATGTGCTGTTC
TCTATACGACGACGACATGTTCATCCAGATGGAGTGGCATGTGCTGCAAA
CACTGGGGTGGACCATTGGACACCCGACTGTCGATAGCTTCTTGCAGATG
GCTGTGATGGATTGCCCGTATGATGCCGAGGTCGAGCACCTGGCATTGTA
TATCTCGGAGATCTCGCTGTTCCATCGGGAATTTGTGTCCAAGCCGTCGT
CGGATCTCGCCCGGGCCTCGCTGGCTCTTGCGCGCTGCATCCTGAACCGG
ACTCAGCCTCGTCACACAGAATGGGCATCCCAGTACGACTCGATGACGCT
CGTGGGGTTGTCGCAGCAGCTTCACCAACCCTCCCAGGTACTTTCCAGGA
AGTATTCCTCAGCTCACTACTCCCGTGTGTCCAAGGTGCTGGAACAATTC
CTTGCCCGTCAAGCTTCGATCGCAAGCTACACGCCCCCCAGCCCGCAAAC
GGACGTTGTACAACCCGAGCCCAAGCCATACGAAGGCGAGATTGGGCTTG
CTACACCGCAGAAGGCGACCCAATCATCGGCCATGGCGCACGGTTATATC
ACACCGCCGATCACCCCGGAGAACGAGGCTTTTGCCAATGGTGGTAATCC
CACCTTTGCCAAAGGCACGGCAGGAGCTAGTGCTTGCTCGCCATCGCCGA
CACCCCCGCCCAGCATGCAGTACGTGAGCTCTCACGCGTATTCGCAAGAT
ACCACGTACCAACAACAGTTCCTCCAGCCCCAGATGTCATTCAGCACTGG
TTACTGA back to topCoding sequence (CDS) from alignment at ch4:1914804..1916060- >KJC3_005207-T1 ID=KJC3_005207-T1|Name=KJC3_005207-T1|organism=Aspergillus niger KJC3|type=CDS|length=1257bp|location=Sequence derived from alignment at ch4:1914804..1916060- (Aspergillus niger KJC3)
ATGGCCTACCACAAGCGCCCCACATCGAGCTACCAGCCCTGCGATACTTT
CTTCGTCGAGACCTACGACGAGTTCCCTGCCCCCCGTATGGATCCGAAAG
AACACGCCAAGTTGATGGCTCGTGAGCGTCAGTACGCCATGGCGGAACAG
CTGTCAAAGATTACCAGCGAGGAATTCCGTGACGACGTTCTGGCGCACAT
GCTGGACATGGATGCTGCTACGCTTCCGGACGTCGAGTCGATCGATATCC
AGACCGAGATCCAGTGGTTCATGCGTCCATACCTGCTCGACTTCTTGATT
GAAGCCCACACTGCATTCCAGCTATTGCCATCGACCCTCTTCCTCACCAT
CAACCTTCTTGACCGTTACTGCTCCAAGCGTGTCGTCTACAAGAGACACT
ATCAACTCGTTGGATGTGCTGCCTTGCTCATCGCAGCCAAGTATGGCGAC
AAGAAGGACCGCGTGCCTACCATCAAGGAGCTCAAGTCGATGTGCTGTTC
TCTATACGACGACGACATGTTCATCCAGATGGAGTGGCATGTGCTGCAAA
CACTGGGGTGGACCATTGGACACCCGACTGTCGATAGCTTCTTGCAGATG
GCTGTGATGGATTGCCCGTATGATGCCGAGGTCGAGCACCTGGCATTGTA
TATCTCGGAGATCTCGCTGTTCCATCGGGAATTTGTGTCCAAGCCGTCGT
CGGATCTCGCCCGGGCCTCGCTGGCTCTTGCGCGCTGCATCCTGAACCGG
ACTCAGCCTCGTCACACAGAATGGGCATCCCAGTACGACTCGATGACGCT
CGTGGGGTTGTCGCAGCAGCTTCACCAACCCTCCCAGGTACTTTCCAGGA
AGTATTCCTCAGCTCACTACTCCCGTGTGTCCAAGGTGCTGGAACAATTC
CTTGCCCGTCAAGCTTCGATCGCAAGCTACACGCCCCCCAGCCCGCAAAC
GGACGTTGTACAACCCGAGCCCAAGCCATACGAAGGCGAGATTGGGCTTG
CTACACCGCAGAAGGCGACCCAATCATCGGCCATGGCGCACGGTTATATC
ACACCGCCGATCACCCCGGAGAACGAGGCTTTTGCCAATGGTGGTAATCC
CACCTTTGCCAAAGGCACGGCAGGAGCTAGTGCTTGCTCGCCATCGCCGA
CACCCCCGCCCAGCATGCAGTACGTGAGCTCTCACGCGTATTCGCAAGAT
ACCACGTACCAACAACAGTTCCTCCAGCCCCAGATGTCATTCAGCACTGG
TTACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036915 |
| DBxref | InterPro:IPR006671 |
| DBxref | InterPro:IPR004367 |
| DBxref | InterPro:IPR013763 |
| DBxref | PFAM:PF00134 |
| DBxref | PFAM:PF02984 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1914804..1916060 - |
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