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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2137519..2139218+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005269-T2 ID=KJC3_005269-T2|Name=KJC3_005269-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1700bp|location=Sequence derived from alignment at ch4:2137519..2139218+ (Aspergillus niger KJC3)
AATGCCATGGCCTGTCGTTGATCGTCGCCTTCCCGTGGCTCCTCCCGGCG
CCTATCTCAACCATCCTCATTAGCCCTCGAACCATGCGCCCCATCCGCTG
TGCTATTCTGAGACTCGGCGCCTGCAGCTGTGGGTGTTTGTATCATGATG
CTGCAGAATGTCGGGCAGCACGTAGCTCTGGTTGATTAAGATGGGCGCTT
CCTGGTCCATCGTGGGGAGCGGATGGCAAATGCCTTTGTAAGTCGCTCAT
TGTTCTTTCAACTATTCTTTCACTCATTGACCCTGTTGCAAAGTTCTTGT
CTCATACTTTCTTTCATAGACAACATTCCTCGTTTAGCCAAAGCCTACTC
AAGCCTTTATTTGGTTCTCTTCTTCTTCATTTCTGTCAATTGTACTGGAT
TAGACTCTGATCGCAATGACGAGGCCACATCTTTGTTCCCTCATGACACG
ACCCTCCATGATACTGCTCCTCGCCCTCATCGCTTCGACAGTATCGCCAA
CGCAGGCCTTTGGCTTACTGCTACGAAGCTCTGACTCCTGTCCCAGCAAC
TACAACAAATGTACAGACAGCAATTTGCCGGCTGATTTCTGCTGCTCCAG
CTCATCAACATGCATCAGCCTGGACGACTCCAGCTCTGCCATCTGCTGTC
CAAGTGGACAGAGCTGTGACTACATCGAAACCATAACCTGCGATGTGCAG
CTCCAGAACGCAACAGCACATCCCAAGAACTCTGTCAAGACGACCCGGCT
GGATGACTCCCTCCCTAAATGTGGCGACAAATGCTGTCCCTTTGGATACA
CCTGCACAGGAGACTCGCTATGTGCCATGAACACATCCAGTGCATCCACC
CTCAGCGCCAGCCAGTCATCCACAACGTCCACAGGAGGAACCACATCCTC
CACAGGAACCATCACCTCCTTCACAACCTCCGCCTCTACGACCGATGCCT
CCAACCCCACCGTCGTCCCCGTCACCACGGGCTCCTCCAAATCCGCCATC
TCCGACAACAACAGCAGCGCCAACGGCACCTCCTCAGCAGCCGCACTATC
TTCTAAAGCCACCAGCCCATCCTACCCTACCAACGCCATAATAGCAGGCT
TCTTTCCCGGCGCCATCTTCGGCGCCGTCCTAGCCCTGTTAGCCCTCTTC
CTCTACCGCAAATACCAAAAGAAACACCAGCCCCCTTCCGCCAAAGTAGC
CCAATTCACCCGCCGCTCCTCAAAAGGCACCCTCCTCGGCATCTCTTCCC
CGATCCCCTCCGACGAGACCTCCTACCGAACAGACTTCCTCCTCCGCCGT
AACCGCAACACGAAGCGATACTCCGAAGGCGCTCGCTCACGTATCCAGCG
CACTGGAACCCGAGTCCGAAGTCTCTTCAACCCTAACAATGCTCCTCCTC
TACCGAAAGCTAACCCTGCAAAGACCCTTGTCCCGGAACACGGCGGAGGA
GCAATGCACGCCCGCGTTCCGGTACCTGTTCCCCCGCTACCTATCTCCGT
GACGCCGTTACAACCCGGGCGGACGCCATCGAAGAAGACATTGACCCGTA
CGGAAAGCATAAGGGTGTATACCCCGCCAGGGGTGTTTGCTACGACAGGG
GTGTTGAAGCCTGATCCGTATCCGACGCATATAAGGACGGAAGGGGCGTT
TGATGACATGGAGAAGTGATTACTTAGAAGTAATTTTTTTTTTTTTTTTT
back to topCoding sequence (CDS) from alignment at ch4:2137519..2139218+ >KJC3_005269-T2 ID=KJC3_005269-T2|Name=KJC3_005269-T2|organism=Aspergillus niger KJC3|type=CDS|length=2340bp|location=Sequence derived from alignment at ch4:2137519..2139218+ (Aspergillus niger KJC3)
ATGGGCGCTTCCTGGTCCATCGTGGGGAGCGGATGGCAAATGCCTTTCAA
CTACAACAAATGTACAGACAGCAATTTGCCGGCTGATTTCTGCTGCTCCA
GCTCATCAACATGCATCAGCCTGGACGACTCCAGCTCTGCCATCTGCTGT
CCAAGTGGACAGAGCTGTGACTACATCGAAACCATAACCTGCGATGTGCA
GCTCCAGAACGCAACAGCACATCCCAAGAACTCTGTCAAGACGACCCGGC
TGGATGACTCCCTCCCTAAATGTGGCGACAAATGCTGTCCCTTTGGATAC
ACCTGCACAGGAGACTCGCTATGTGCCATGAACACATCCAGTGCATCCAC
CCTCAGCGCCAGCCAGTCATCCACAACGTCCACAGGAGGAACCACATCCT
CCACAGGAACCATCACCTCCTTCACAACCTCCGCCTCTACGACCGATGCC
TCCAACCCCACCGTCGTCCCCGTCACCACGGGCTCCTCCAAATCCGCCAT
CTCCGACAACAACAGCAGCGCCAACGGCACCTCCTCAGCAGCCGCACTAT
CTTCTAAAGCCACCAGCCCATCCTACCCTACCAACGCCATAATAGCAGGC
TTCTTTCCCGGCGCCATCTTCGGCGCCGTCCTAGCCCTGTTAGCCCTCTT
CCTCTACCGCAAATACCAAAAGAAACACCAGCCCCCTTCCGCCAAAGTAG
CCCAATTCACCCGCCGCTCCTCAAAAGGCACCCTCCTCGGCATCTCTTCC
CCGATCCCCTCCGACGAGACCTCCTACCGAACAGACTTCCTCCTCCGCCG
TAACCGCAACACGAAGCGATACTCCGAAGGCGCTCGCTCACGTATCCAGC
GCACTGGAACCCGAGTCCGAAGTCTCTTCAACCCTAACAATGCTCCTCCT
CTACCGAAAGCTAACCCTGCAAAGACCCTTGTCCCGGAACACGGCGGAGG
AGCAATGCACGCCCGCGTTCCGGTACCTGTTCCCCCGCTACCTATCTCCG
TGACGCCGTTACAACCCGGGCGGACGCCATCGAAGAAGACATTGACCCGT
ACGGAAAGCATAAGGGTGTATACCCCGCCAGGGGTGTTTGCTACGACAGG
GGTGTTGAAGCCTGATCCGTATCCGACGCATATAAGGACGGAAGGGGCGT
TTGATGACATGGAGAAGTGAATGGGCGCTTCCTGGTCCATCGTGGGGAGC
GGATGGCAAATGCCTTTCAACTACAACAAATGTACAGACAGCAATTTGCC
GGCTGATTTCTGCTGCTCCAGCTCATCAACATGCATCAGCCTGGACGACT
CCAGCTCTGCCATCTGCTGTCCAAGTGGACAGAGCTGTGACTACATCGAA
ACCATAACCTGCGATGTGCAGCTCCAGAACGCAACAGCACATCCCAAGAA
CTCTGTCAAGACGACCCGGCTGGATGACTCCCTCCCTAAATGTGGCGACA
AATGCTGTCCCTTTGGATACACCTGCACAGGAGACTCGCTATGTGCCATG
AACACATCCAGTGCATCCACCCTCAGCGCCAGCCAGTCATCCACAACGTC
CACAGGAGGAACCACATCCTCCACAGGAACCATCACCTCCTTCACAACCT
CCGCCTCTACGACCGATGCCTCCAACCCCACCGTCGTCCCCGTCACCACG
GGCTCCTCCAAATCCGCCATCTCCGACAACAACAGCAGCGCCAACGGCAC
CTCCTCAGCAGCCGCACTATCTTCTAAAGCCACCAGCCCATCCTACCCTA
CCAACGCCATAATAGCAGGCTTCTTTCCCGGCGCCATCTTCGGCGCCGTC
CTAGCCCTGTTAGCCCTCTTCCTCTACCGCAAATACCAAAAGAAACACCA
GCCCCCTTCCGCCAAAGTAGCCCAATTCACCCGCCGCTCCTCAAAAGGCA
CCCTCCTCGGCATCTCTTCCCCGATCCCCTCCGACGAGACCTCCTACCGA
ACAGACTTCCTCCTCCGCCGTAACCGCAACACGAAGCGATACTCCGAAGG
CGCTCGCTCACGTATCCAGCGCACTGGAACCCGAGTCCGAAGTCTCTTCA
ACCCTAACAATGCTCCTCCTCTACCGAAAGCTAACCCTGCAAAGACCCTT
GTCCCGGAACACGGCGGAGGAGCAATGCACGCCCGCGTTCCGGTACCTGT
TCCCCCGCTACCTATCTCCGTGACGCCGTTACAACCCGGGCGGACGCCAT
CGAAGAAGACATTGACCCGTACGGAAAGCATAAGGGTGTATACCCCGCCA
GGGGTGTTTGCTACGACAGGGGTGTTGAAGCCTGATCCGTATCCGACGCA
TATAAGGACGGAAGGGGCGTTTGATGACATGGAGAAGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005269-T2.utr5p1 | KJC3_005269-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005269-T2.utr3p1 | KJC3_005269-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-31) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2137519..2139218 + |
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