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KJC3_005312-T1, KJC3_005312-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005312-T1
Unique NameKJC3_005312-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2284047..2286653-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005312-T1 ID=KJC3_005312-T1|Name=KJC3_005312-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2607bp|location=Sequence derived from alignment at ch4:2284047..2286653- (Aspergillus niger KJC3)
ACCTGCAGTTCATGGTTCACAGCATTCGCTCAACTGTTTCATCACATGGT
ACTTCGAAACCCTGGCAAACCACCCAACAAGCTTGCAGCATAACAAATTA
AGGCATACTGAATGATAGTCTCATGCAGTTACTGTGACAATGGTGTATCC
GTCATAGTTCCTGACCAGCCGATCTACTCAAGAGTCACGTGATGAAAGAG
CCAGCAGCAGGAGGAAGACCACCCAGTCAATCAGGCAATCCACTTCCACT
GGAACAAGGGGAGGGGGAGAAATAGGGGTCCTCTGACTTCTGTTCATGCA
TCTTCAACATCGTCTGGAAAGTCTTCAGACTAATCAGCGATTTGGAACCA
ATGCTTCAATCCGAATGCTTGAACCCCGTTGGGTCCACAATCCGACCCAG
GGCCTCTCCCTGTTGACCATCGATGATTAACAGACCTGACAATGTTCAGG
TTGCTTCTAGACTTGAGAACAAATGAGCGCCATCAAAGAAAGTGAGATTG
TCATCAAGGTCAGCCGGAACACCATTGAAATGCGCATCGGATCCAGCCGC
ATAATGGTCGGGGATTTGCTTGATGATGGGTTGACCACACACACCCCCCC
CCCTCTCTGACCTCTGCCACACCCCCCCCCGCTCGTCCACCAAAACTTTA
GACCCGCGTTTGTCTGAACTCCTTTCTCAACACCATCGTCCAGATTTCAA
TCCTGTAAATCATAAGTGATAGGGTCAAGTCAGAGAGCGGTAGATTGTTT
CCATCACGCGTCTCACTTGGGTTTGCCTGACGGCTTCGAAGCTGGGACCG
AGGTGTTCCATTTCGAGCTGCAGGCTAAGGTCTCTGGCCCCTGGATCTTG
TTCAGTTGATCCGCGCAACAGGAATCATCCAAAGAGACACTATTCGAATT
ATCCTTCCCAGCCTTCCTCGTTCCTCAAAACCTTCCTCTCGACCGCGCCG
AATTGCGGGGACGACGTCATGAACGACACCACGACCACCCCTTCTCCCAC
TCCGGGTCCCGCCACGAAAGCATCTCCGACTTCGAAATCTCCCTCAGCCG
TAGCCGGAACGAAGCGCAAGCGCGCATCAGCGGCGAAATACTACGCCGTG
AAGGCTGGCTATCAGCCCGGTGTTTACTATGATTGGCATGATTGTCTGAC
CCAGGTCACCGGGTACAAGGGAGCTGTCTGTAAGGTGACCCGCGGATAGG
CCGCATCCTGTCTTCTGAAGCTGACCTATTCTTTCAGTCCAGGCCTTCCC
TTCTTACGAAGAAGCAAATGCCTTCCTTACCGGGACTCGTGTCCCCGCTG
CGCGCGGCGGGACCCCCTTGGATTCCGAACCCACGAGATTCTACGGTGTC
CAGCGTGGTCGAATACCTGGTGTTTATACGGACTGGGCAAAGGCGCAGGA
GCAGATCAAAGGATTTCCCAAACCGCGTTACAAGAAATTTTCGACAAGGG
AGGAAGCAGAGGAGTTTGCAAGGGAAGGTCAAGGGTCTGGCACTACGTTC
GGAAAGACCCCGGAATCGCAGAAGCTCGCCGGTGCACCGGGACTGATGAA
CGGGGTCCCTGCGGATGCGCAGGGTATACCTTTTGAGGCGGGGAATGGCC
CTCTGCCGACCGGAGCGGAGGATGGGTTTGACCCCAACGTATTGTTGGAT
CCCAAAACAGGGAAAGTGGTCTATAAATCACAGGACCAGAAGACCGCGAC
CAAGATGAAATCCACTGGTCCACCGGGGATGCTGCGCATCTACACGGACG
GTAGTTCTTTGAAAAATGGCAAAGCGCTTGCCTCAGCGGGTGTCGGGGTT
TACTTTGGACCTGGCGACTCACGGTTTGTCCCACCCCCCCCCCTGACACT
CACCTTAGCGTTGTCGTGTGTTCTTTATTCCCTGGGAGGGTTTGCCTTTG
GCCTATACTGACGCCTGTTCTCCCAGCAGAAATGTTTCAGAGCCCCTCAA
AGGTAGTCGCCAGACCAATCAGCGTGCCGAGCTGACGGCCATCCTCCGGG
CGCTTGACATAGCTCCACGACACCGGGACGTGACCATATTTACAGATAGC
CAATACGCGATCAACTGTGTGACGGTGTGGTTTACAAAGTGGCGGCGCAA
CAACTGGATGACCGCTGGCAACAAGCCGGTGGACAACAAGGACTTGGTTG
AATCCATTTTGTCGAAGATCGAAGAACGCAATGAGCTGAAGGTGAAGACC
TTGTTCGAATGGGTCAAGGGACATAGCTCCCACCCTGGGAATGAGGCCGC
CGATCGTCTGGCGGTGAGTGGTGCTCGACGAGGAGTTTCGGAGAAGGCTG
CAGCATTGGAAGCAGTCAGAGACATTCCGGACGAGGCTTTTGAGGATGAT
GACGACGACTTCTGAGCTACCAATCTCGAGGCACCCTCGTAGATGCTCTC
TGATACAGATCAATGATGGCGATGGGTTTTCTGTATCAAGGTACTGGGTA
GAAATGTTGCGTTGCGATCCGTGACTTCTTTCCTGTTGGTCTTATTGAGA
AATGACGTGTCCCACCCCGGGGCGGGAGAGAGATTCAACCTAGAACTGCA
GCATGAATTGATGCCTTACTTGGCATTAGCTGGGCCAGCTGTAGATGATA
TGACCTG
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Coding sequence (CDS) from alignment at ch4:2284047..2286653-

>KJC3_005312-T1 ID=KJC3_005312-T1|Name=KJC3_005312-T1|organism=Aspergillus niger KJC3|type=CDS|length=3699bp|location=Sequence derived from alignment at ch4:2284047..2286653- (Aspergillus niger KJC3)
AAATGTTTCAGAGCCCCTCAAAGGTAGTCGCCAGACCAATCAGCGTGCCG
AGCTGACGGCCATCCTCCGGGCGCTTGACATAGCTCCACGACACCGGGAC
GTGACCATATTTACAGATAGCCAATACGCGATCAACTGTGTGACGGTGTG
GTTTACAAAGTGGCGGCGCAACAACTGGATGACCGCTGGCAACAAGCCGG
TGGACAACAAGGACTTGGTTGAATCCATTTTGTCGAAGATCGAAGAACGC
AATGAGCTGAAGGTGAAGACCTTGTTCGAATGGGTCAAGGGACATAGCTC
CCACCCTGGGAATGAGGCCGCCGATCGTCTGGCGGTGAGTGGTGCTCGAC
GAGGAGTTTCGGAGAAGGCTGCAGCATTGGAAGCAGTCAGAGACATTCCG
GACGAGGCTTTTGAGGATGATGACGACGACTTCTGATCCAGGCCTTCCCT
TCTTACGAAGAAGCAAATGCCTTCCTTACCGGGACTCGTGTCCCCGCTGC
GCGCGGCGGGACCCCCTTGGATTCCGAACCCACGAGATTCTACGGTGTCC
AGCGTGGTCGAATACCTGGTGTTTATACGGACTGGGCAAAGGCGCAGGAG
CAGATCAAAGGATTTCCCAAACCGCGTTACAAGAAATTTTCGACAAGGGA
GGAAGCAGAGGAGTTTGCAAGGGAAGGTCAAGGGTCTGGCACTACGTTCG
GAAAGACCCCGGAATCGCAGAAGCTCGCCGGTGCACCGGGACTGATGAAC
GGGGTCCCTGCGGATGCGCAGGGTATACCTTTTGAGGCGGGGAATGGCCC
TCTGCCGACCGGAGCGGAGGATGGGTTTGACCCCAACGTATTGTTGGATC
CCAAAACAGGGAAAGTGGTCTATAAATCACAGGACCAGAAGACCGCGACC
AAGATGAAATCCACTGGTCCACCGGGGATGCTGCGCATCTACACGGACGG
TAGTTCTTTGAAAAATGGCAAAGCGCTTGCCTCAGCGGGTGTCGGGGTTT
ACTTTGGACCTGGCGACTCACGATGAACGACACCACGACCACCCCTTCTC
CCACTCCGGGTCCCGCCACGAAAGCATCTCCGACTTCGAAATCTCCCTCA
GCCGTAGCCGGAACGAAGCGCAAGCGCGCATCAGCGGCGAAATACTACGC
CGTGAAGGCTGGCTATCAGCCCGGTGTTTACTATGATTGGCATGATTGTC
TGACCCAGGTCACCGGGTACAAGGGAGCTGTCTAAATGTTTCAGAGCCCC
TCAAAGGTAGTCGCCAGACCAATCAGCGTGCCGAGCTGACGGCCATCCTC
CGGGCGCTTGACATAGCTCCACGACACCGGGACGTGACCATATTTACAGA
TAGCCAATACGCGATCAACTGTGTGACGGTGTGGTTTACAAAGTGGCGGC
GCAACAACTGGATGACCGCTGGCAACAAGCCGGTGGACAACAAGGACTTG
GTTGAATCCATTTTGTCGAAGATCGAAGAACGCAATGAGCTGAAGGTGAA
GACCTTGTTCGAATGGGTCAAGGGACATAGCTCCCACCCTGGGAATGAGG
CCGCCGATCGTCTGGCGGTGAGTGGTGCTCGACGAGGAGTTTCGGAGAAG
GCTGCAGCATTGGAAGCAGTCAGAGACATTCCGGACGAGGCTTTTGAGGA
TGATGACGACGACTTCTGATCCAGGCCTTCCCTTCTTACGAAGAAGCAAA
TGCCTTCCTTACCGGGACTCGTGTCCCCGCTGCGCGCGGCGGGACCCCCT
TGGATTCCGAACCCACGAGATTCTACGGTGTCCAGCGTGGTCGAATACCT
GGTGTTTATACGGACTGGGCAAAGGCGCAGGAGCAGATCAAAGGATTTCC
CAAACCGCGTTACAAGAAATTTTCGACAAGGGAGGAAGCAGAGGAGTTTG
CAAGGGAAGGTCAAGGGTCTGGCACTACGTTCGGAAAGACCCCGGAATCG
CAGAAGCTCGCCGGTGCACCGGGACTGATGAACGGGGTCCCTGCGGATGC
GCAGGGTATACCTTTTGAGGCGGGGAATGGCCCTCTGCCGACCGGAGCGG
AGGATGGGTTTGACCCCAACGTATTGTTGGATCCCAAAACAGGGAAAGTG
GTCTATAAATCACAGGACCAGAAGACCGCGACCAAGATGAAATCCACTGG
TCCACCGGGGATGCTGCGCATCTACACGGACGGTAGTTCTTTGAAAAATG
GCAAAGCGCTTGCCTCAGCGGGTGTCGGGGTTTACTTTGGACCTGGCGAC
TCACGATGAACGACACCACGACCACCCCTTCTCCCACTCCGGGTCCCGCC
ACGAAAGCATCTCCGACTTCGAAATCTCCCTCAGCCGTAGCCGGAACGAA
GCGCAAGCGCGCATCAGCGGCGAAATACTACGCCGTGAAGGCTGGCTATC
AGCCCGGTGTTTACTATGATTGGCATGATTGTCTGACCCAGGTCACCGGG
TACAAGGGAGCTGTCTAAATGTTTCAGAGCCCCTCAAAGGTAGTCGCCAG
ACCAATCAGCGTGCCGAGCTGACGGCCATCCTCCGGGCGCTTGACATAGC
TCCACGACACCGGGACGTGACCATATTTACAGATAGCCAATACGCGATCA
ACTGTGTGACGGTGTGGTTTACAAAGTGGCGGCGCAACAACTGGATGACC
GCTGGCAACAAGCCGGTGGACAACAAGGACTTGGTTGAATCCATTTTGTC
GAAGATCGAAGAACGCAATGAGCTGAAGGTGAAGACCTTGTTCGAATGGG
TCAAGGGACATAGCTCCCACCCTGGGAATGAGGCCGCCGATCGTCTGGCG
GTGAGTGGTGCTCGACGAGGAGTTTCGGAGAAGGCTGCAGCATTGGAAGC
AGTCAGAGACATTCCGGACGAGGCTTTTGAGGATGATGACGACGACTTCT
GATCCAGGCCTTCCCTTCTTACGAAGAAGCAAATGCCTTCCTTACCGGGA
CTCGTGTCCCCGCTGCGCGCGGCGGGACCCCCTTGGATTCCGAACCCACG
AGATTCTACGGTGTCCAGCGTGGTCGAATACCTGGTGTTTATACGGACTG
GGCAAAGGCGCAGGAGCAGATCAAAGGATTTCCCAAACCGCGTTACAAGA
AATTTTCGACAAGGGAGGAAGCAGAGGAGTTTGCAAGGGAAGGTCAAGGG
TCTGGCACTACGTTCGGAAAGACCCCGGAATCGCAGAAGCTCGCCGGTGC
ACCGGGACTGATGAACGGGGTCCCTGCGGATGCGCAGGGTATACCTTTTG
AGGCGGGGAATGGCCCTCTGCCGACCGGAGCGGAGGATGGGTTTGACCCC
AACGTATTGTTGGATCCCAAAACAGGGAAAGTGGTCTATAAATCACAGGA
CCAGAAGACCGCGACCAAGATGAAATCCACTGGTCCACCGGGGATGCTGC
GCATCTACACGGACGGTAGTTCTTTGAAAAATGGCAAAGCGCTTGCCTCA
GCGGGTGTCGGGGTTTACTTTGGACCTGGCGACTCACGATGAACGACACC
ACGACCACCCCTTCTCCCACTCCGGGTCCCGCCACGAAAGCATCTCCGAC
TTCGAAATCTCCCTCAGCCGTAGCCGGAACGAAGCGCAAGCGCGCATCAG
CGGCGAAATACTACGCCGTGAAGGCTGGCTATCAGCCCGGTGTTTACTAT
GATTGGCATGATTGTCTGACCCAGGTCACCGGGTACAAGGGAGCTGTCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004523RNA-DNA hybrid ribonuclease activity
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005312KJC3_005312Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005312-T1KJC3_005312-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005312-T1.cdsKJC3_005312-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005312-T1.utr3p1KJC3_005312-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005312-T1.exon3KJC3_005312-T1.exon3Aspergillus niger KJC3exon
KJC3_005312-T1.exon2KJC3_005312-T1.exon2Aspergillus niger KJC3exon
KJC3_005312-T1.exon1KJC3_005312-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005312-T1.utr5p1KJC3_005312-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR009027
DBxrefInterPro:IPR011320
DBxrefInterPro:IPR002156
DBxrefInterPro:IPR037056
DBxrefInterPro:IPR036397
DBxrefPFAM:PF00075
DBxrefPFAM:PF01693
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2284047..2286653 -
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