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KJC3_005335-T1, KJC3_005335-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005335-T1
Unique NameKJC3_005335-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2350486..2352229+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005335-T1 ID=KJC3_005335-T1|Name=KJC3_005335-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1744bp|location=Sequence derived from alignment at ch4:2350486..2352229+ (Aspergillus niger KJC3)
GATCAAGATCACTCTGCGGCCATCTACCAAAGTTCTCTGCTACGGATCTC
GCCTCACAATTAAGCTTGATCATTTTCCGATACAATTGCCTAGCTGATCT
TGCGCATGACGACGGAACAACCCAGGCGCAGAACCACCTCACGATAAACC
TATCCGACACAGATATAGAGTGCGGACCACGCGAGCTTCATTCCATCTAT
AACCATTACATTCATACATAACGATTCAATTGATCTGGGCGACCGCTTCC
CTGTCCCCTAAACATTAGCTCGCGCTAGCACTACCAACCACAATGCTCTC
CCTTCCACTCATCACACCTCGCGATGTACGTGCCATCGGCTTCTGCGAAT
TCTCCACAATACCACCCTTGATCTCCCATTGACGTGCATCCTTGGCTAAT
TCGCCTCTCTTATAGTCTCATGAACTCTGGTTCGGCTCCTCACAACCCTA
CCGAACCTCCTCCCAGCACCAGCCTTCCGCCGGAGAAACACAACCACATG
CCCGCCGCAATGGCTCTACTGCGCTAGGCGGACGTGCCTCAGCCGCTGCC
TCAGGAAATATGCTTTCATCCCTCCTCCTGGAAGAGCGTGCTCTACGTGC
GCGCAAGAACAATATTGCCTCGTTCGGATACTCGTGGATCAGGCCGGCCG
GGTGTCCCAAGACTATGCTGGGCATGAAAGAGGAGGAGGCGGAACGCGAA
GAGGCGCTGGCCGCCGCAGCGGCAGAGAGAGCAGCGGCAGCGGCAGCAGC
GGAGGTGGGCGTGGATGGATTAGACGAGCTCGGGAACCAGACACAGGGTA
CTTTTGATGGCGATGGCCAGGATGACACAGGCATGGAAAGAGATCTGGAC
GACGATATCCCCGACGCGGATGCAGATGGGCTGGTCGAGGAAGGCGAGGA
AGGGCTGGAAGAGGAGGATGTCGTGGATGAGGGAGAATACATGGAGCGTG
ATCTAGACGATGACATTCCGGAGGCATTCCCGGATGATGACGAGCTCGAA
GAGGAAGAAGACTTGGAGGAAGAAAATGACGACTTCGACAATCAGCCGGA
CCTGGATAACGATATCCCCAGCGCGGCCGAAGAAGACTATGATGACGAGG
GTATGAGCGAAGGGGAGGAAGATATGGGTCGGGACCTGGATGATGACATC
CCCGAGGCAGTCGAGGACCGGTCAGAGCAGGAAGAGGAATGGCAACACAC
CGACACCGATGTGGAATTTGACGATGAGGAGGATGTCAGCTTCTCGCAAG
ACCCCTTCTCGCAGAGCTTCCGCGCCAGTACAACTAGCAGTCGAGGCCTG
CCACCGCCTATTCGGCGGGAGAGAGAAACCGAAGCCCAACGACGGTTCTT
ACAGCGGTGGAGTGGAGGTGGTGATGCCTTTGACACTAGCAGCATGCTCG
TCGACGATGAGGACCTTCGCGCTTCTTTGACCAGTCAGAGCAGCCGACGG
AGTTTCTTTAGTCGGTTCCCTAGACGGCGCATGGGAGGCCCCAGAGACAG
TCTCGAGTGATGACAAGTTCACTTGTTATATGCATTAGTGTACTATAATT
CTCGGGGACAGGTTATGGAGTCCTCGGTTATCGTGAAAGGGTGGGATGGC
TGTGTTTATATAATTGCATGGAGCCGAGGACGGCGTTTTGGGCCCATACA
GGATTTTAAAGACTTACGTTTTAGTTCTACTACCACGCATGATACAATGG
CCTTGAAAGTAGCAGTCAAGAACAAATATCTCTCGTATCGCAAG
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Coding sequence (CDS) from alignment at ch4:2350486..2352229+

>KJC3_005335-T1 ID=KJC3_005335-T1|Name=KJC3_005335-T1|organism=Aspergillus niger KJC3|type=CDS|length=951bp|location=Sequence derived from alignment at ch4:2350486..2352229+ (Aspergillus niger KJC3)
ATGCTTTCATCCCTCCTCCTGGAAGAGCGTGCTCTACGTGCGCGCAAGAA
CAATATTGCCTCGTTCGGATACTCGTGGATCAGGCCGGCCGGGTGTCCCA
AGACTATGCTGGGCATGAAAGAGGAGGAGGCGGAACGCGAAGAGGCGCTG
GCCGCCGCAGCGGCAGAGAGAGCAGCGGCAGCGGCAGCAGCGGAGGTGGG
CGTGGATGGATTAGACGAGCTCGGGAACCAGACACAGGGTACTTTTGATG
GCGATGGCCAGGATGACACAGGCATGGAAAGAGATCTGGACGACGATATC
CCCGACGCGGATGCAGATGGGCTGGTCGAGGAAGGCGAGGAAGGGCTGGA
AGAGGAGGATGTCGTGGATGAGGGAGAATACATGGAGCGTGATCTAGACG
ATGACATTCCGGAGGCATTCCCGGATGATGACGAGCTCGAAGAGGAAGAA
GACTTGGAGGAAGAAAATGACGACTTCGACAATCAGCCGGACCTGGATAA
CGATATCCCCAGCGCGGCCGAAGAAGACTATGATGACGAGGGTATGAGCG
AAGGGGAGGAAGATATGGGTCGGGACCTGGATGATGACATCCCCGAGGCA
GTCGAGGACCGGTCAGAGCAGGAAGAGGAATGGCAACACACCGACACCGA
TGTGGAATTTGACGATGAGGAGGATGTCAGCTTCTCGCAAGACCCCTTCT
CGCAGAGCTTCCGCGCCAGTACAACTAGCAGTCGAGGCCTGCCACCGCCT
ATTCGGCGGGAGAGAGAAACCGAAGCCCAACGACGGTTCTTACAGCGGTG
GAGTGGAGGTGGTGATGCCTTTGACACTAGCAGCATGCTCGTCGACGATG
AGGACCTTCGCGCTTCTTTGACCAGTCAGAGCAGCCGACGGAGTTTCTTT
AGTCGGTTCCCTAGACGGCGCATGGGAGGCCCCAGAGACAGTCTCGAGTG
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005680anaphase-promoting complex
Vocabulary: Biological Process
TermDefinition
GO:0031145anaphase-promoting complex-dependent catabolic process
GO:0030071regulation of mitotic metaphase/anaphase transition
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005335KJC3_005335Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005335-T1.utr5p1KJC3_005335-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005335-T1.exon1KJC3_005335-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005335-T1.cdsKJC3_005335-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005335-T1.utr3p1KJC3_005335-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005335-T1KJC3_005335-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR008402
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2350486..2352229 +
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