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KJC3_005375-T1, KJC3_005375-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005375-T1
Unique NameKJC3_005375-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2546491..2548121+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005375-T1 ID=KJC3_005375-T1|Name=KJC3_005375-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1631bp|location=Sequence derived from alignment at ch4:2546491..2548121+ (Aspergillus niger KJC3)
GGCAAATCGAAGGCGCCCTTAATATTCTATCGAGACGCAGCTGATTTTCT
TTTTTTGCTTTCCCCTCCTTTCCTCTTTGTTACAAAAGATCGTACACATA
TATTCCACACCTAAAGTTGAGAAAGTTTAAGGCAACAACGAAGACAACAT
GGCCAAGCGTGAACTTCAAGATAAGGGTAGCACTGAGCATAGGGCGAAAA
AGAAGTCAAGAAACGAAAAGCACACAAAGAAGGCTGAGGACTCCCAAGCC
AGTGCGCAGTCCTCTGAGACGCAGTACACTGACCCGAAAGAACCTTCACC
AGCAGTTATAGAGAAGTTTCTCGAAGAAAACTCTGTCAAGATAACGGATA
CTTTAGAGGGTGCAACGAAGCTTCATCCCATTACCTCTTTCTCTCACCTA
CCTACCTGCAACAGTGCACTGTACCGTCCTCTTGAATCTTTCACTTCTCC
GACTGCCATCCAGTCAGCAACCTGGCCTTTCCTGTTTTCTGGCCGTGATG
TAATCGGCATTGCTGAAACTGGGAGTGGTAAGACGCTTGGCTTCGGCTTG
CCGTGCCTGAAAAACTTACAAGACTCGGCGAAGAAGGGAAAGCCTTATAA
GCCGACAGCGGTGATGATTTCCCCAACGAGAGAACTTGCAATGCAGATAC
ATGATCAGATCTCGAAATTTGCAGAATTAGTGGATATCAAGGTAGCTTGT
ATCTTCGGGGGTGTGAAGAAAGAGGAGCAGCGTGAGGCTTTGAAGACAGC
GGCTATTGTCGTGGCGACGCCAGGAAGACTGAAGGATCTTCAAAATGATG
GCTCGGTGGATCTAGGAAAAGTCAAGTATCTTGTTCTGGATGAAGCAGAT
CGCATGCTGGACAAAGGTTTCGAACAGGATATCAAGGATATCATCCGCCC
CATGCCGGTGTCAAAGCGCCAAACTGTAATGTTCACTGCGACCTGGCCCC
CAGTGGTTAGGGATCTTGCTGCAACGTTTATGACTTCTCCTGTGACGGTC
ACAATTGGTGGAGAGCCCTCGGCTGATCCGCGCGCAAATACTAGGATCAA
GCAAGTTGTTGAGGTGGTGAAGCCGCACGAAAAAGAACAGAGGCTTGTGC
AGCTATTGAATAAGTATCAGAAGGGCCCATCCAGCTCGGATAAGATTCTG
GTGTTCTGCTTGTATAAGAAGGAGGCTGTGCGTGTCGAGAGACTTCTTTG
GAATAAAGGCTTCAAGGTTGCCGGAATACACGGTGATTTAGGTCAACAGG
AACGATTCAAAAGTTTGGAATCCTTCAAAAAAGGCGTCTCAACCGTTCTT
GTCGCAACTGATGTGGCAGCTCGTGGTCTCGACATACCCTCAGTTAAGCT
TGTCATCAACGTTACGTTTCCCCTGACCGTTGAGGATTACGTACATCGAA
TTGGCCGGTTAGTGAAGTACCTCGTCCCTGTATGTTGAGTATCGCCTACT
GACTGGCCCAAAGGACCGGCCGTGCTGGAGCTGAGGGCCATGCCATCACT
CTATTTACTGAGGTTGACAAAGCTCAGTCTGGAGCGTAAGTAGTCATTGT
CTTGGAAGCATTCCGATCAAACTCAACCGAGACTGACATGTTATAGTTTA
ATAAACGTTCTAAAAGCGGCTAATCAGGATG
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Coding sequence (CDS) from alignment at ch4:2546491..2548121+

>KJC3_005375-T1 ID=KJC3_005375-T1|Name=KJC3_005375-T1|organism=Aspergillus niger KJC3|type=CDS|length=2670bp|location=Sequence derived from alignment at ch4:2546491..2548121+ (Aspergillus niger KJC3)
ATGGCCAAGCGTGAACTTCAAGATAAGGGTAGCACTGAGCATAGGGCGAA
AAAGAAGTCAAGAAACGAAAAGCACACAAAGAAGGCTGAGGACTCCCAAG
CCAGTGCGCAGTCCTCTGAGACGCAGTACACTGACCCGAAAGAACCTTCA
CCAGCAGTTATAGAGAAGTTTCTCGAAGAAAACTCTGTCAAGATAACGGA
TACTTTAGAGGGTGCAACGAAGCTTCATCCCATTACCTCTTTCTCTCACC
TACCTACCTGCAACAGTGCACTGTACCGTCCTCTTGAATCTTTCACTTCT
CCGACTGCCATCCAGTCAGCAACCTGGCCTTTCCTGTTTTCTGGCCGTGA
TGTAATCGGCATTGCTGAAACTGGGAGTGGTAAGACGCTTGGCTTCGGCT
TGCCGTGCCTGAAAAACTTACAAGACTCGGCGAAGAAGGGAAAGCCTTAT
AAGCCGACAGCGGTGATGATTTCCCCAACGAGAGAACTTGCAATGCAGAT
ACATGATCAGATCTCGAAATTTGCAGAATTAGTGGATATCAAGGTAGCTT
GTATCTTCGGGGGTGTGAAGAAAGAGGAGCAGCGTGAGGCTTTGAAGACA
GCGGCTATTGTCGTGGCGACGCCAGGAAGACTGAAGGATCTTCAAAATGA
TGGCTCGGTGGATCTAGGAAAAGTCAAGTATCTTGTTCTGGATGAAGCAG
ATCGCATGCTGGACAAAGGTTTCGAACAGGATATCAAGGATATCATCCGC
CCCATGCCGGTGTCAAAGCGCCAAACTGTAATGTTCACTGCGACCTGGCC
CCCAGTGGTTAGGGATCTTGCTGCAACGTTTATGACTTCTCCTGTGACGG
TCACAATTGGTGGAGAGCCCTCGGCTGATCCGCGCGCAAATACTAGGATC
AAGCAAGTTGTTGAGGTGGTGAAGCCGCACGAAAAAGAACAGAGGCTTGT
GCAGCTATTGAATAAGTATCAGAAGGGCCCATCCAGCTCGGATAAGATTC
TGGTGTTCTGCTTGTATAAGAAGGAGGCTGTGCGTGTCGAGAGACTTCTT
TGGAATAAAGGCTTCAAGGTTGCCGGAATACACGGTGATTTAGGTCAACA
GGAACGATTCAAAAGTTTGGAATCCTTCAAAAAAGGCGTCTCAACCGTTC
TTGTCGCAACTGATGTGGCAGCTCGTGGTCTCGACATACCCTCAGTTAAG
CTTGTCATCAACGTTACGTTTCCCCTGACCGTTGAGGATTACGTACATCG
AATTGGCCGGACCGGCCGTGCTGGAGCTGAGGGCCATGCCATCACTCTAT
TTACTGAGGTTGACAAAGCTCAGTCTGGAGCGTAAATGGCCAAGCGTGAA
CTTCAAGATAAGGGTAGCACTGAGCATAGGGCGAAAAAGAAGTCAAGAAA
CGAAAAGCACACAAAGAAGGCTGAGGACTCCCAAGCCAGTGCGCAGTCCT
CTGAGACGCAGTACACTGACCCGAAAGAACCTTCACCAGCAGTTATAGAG
AAGTTTCTCGAAGAAAACTCTGTCAAGATAACGGATACTTTAGAGGGTGC
AACGAAGCTTCATCCCATTACCTCTTTCTCTCACCTACCTACCTGCAACA
GTGCACTGTACCGTCCTCTTGAATCTTTCACTTCTCCGACTGCCATCCAG
TCAGCAACCTGGCCTTTCCTGTTTTCTGGCCGTGATGTAATCGGCATTGC
TGAAACTGGGAGTGGTAAGACGCTTGGCTTCGGCTTGCCGTGCCTGAAAA
ACTTACAAGACTCGGCGAAGAAGGGAAAGCCTTATAAGCCGACAGCGGTG
ATGATTTCCCCAACGAGAGAACTTGCAATGCAGATACATGATCAGATCTC
GAAATTTGCAGAATTAGTGGATATCAAGGTAGCTTGTATCTTCGGGGGTG
TGAAGAAAGAGGAGCAGCGTGAGGCTTTGAAGACAGCGGCTATTGTCGTG
GCGACGCCAGGAAGACTGAAGGATCTTCAAAATGATGGCTCGGTGGATCT
AGGAAAAGTCAAGTATCTTGTTCTGGATGAAGCAGATCGCATGCTGGACA
AAGGTTTCGAACAGGATATCAAGGATATCATCCGCCCCATGCCGGTGTCA
AAGCGCCAAACTGTAATGTTCACTGCGACCTGGCCCCCAGTGGTTAGGGA
TCTTGCTGCAACGTTTATGACTTCTCCTGTGACGGTCACAATTGGTGGAG
AGCCCTCGGCTGATCCGCGCGCAAATACTAGGATCAAGCAAGTTGTTGAG
GTGGTGAAGCCGCACGAAAAAGAACAGAGGCTTGTGCAGCTATTGAATAA
GTATCAGAAGGGCCCATCCAGCTCGGATAAGATTCTGGTGTTCTGCTTGT
ATAAGAAGGAGGCTGTGCGTGTCGAGAGACTTCTTTGGAATAAAGGCTTC
AAGGTTGCCGGAATACACGGTGATTTAGGTCAACAGGAACGATTCAAAAG
TTTGGAATCCTTCAAAAAAGGCGTCTCAACCGTTCTTGTCGCAACTGATG
TGGCAGCTCGTGGTCTCGACATACCCTCAGTTAAGCTTGTCATCAACGTT
ACGTTTCCCCTGACCGTTGAGGATTACGTACATCGAATTGGCCGGACCGG
CCGTGCTGGAGCTGAGGGCCATGCCATCACTCTATTTACTGAGGTTGACA
AAGCTCAGTCTGGAGCGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DBP3KJC3_005375Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005375-T1KJC3_005375-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005375-T1.utr5p1KJC3_005375-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005375-T1.exon1KJC3_005375-T1.exon1Aspergillus niger KJC3exon
KJC3_005375-T1.exon2KJC3_005375-T1.exon2Aspergillus niger KJC3exon
KJC3_005375-T1.exon3KJC3_005375-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005375-T1.cdsKJC3_005375-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005375-T1.utr3p1KJC3_005375-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR001650
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
ProductRNA-dependent ATPase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2546491..2548121 +
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