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KJC3_005406-T1, KJC3_005406-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005406-T1
Unique NameKJC3_005406-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2629323..2631857+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005406-T1 ID=KJC3_005406-T1|Name=KJC3_005406-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2535bp|location=Sequence derived from alignment at ch4:2629323..2631857+ (Aspergillus niger KJC3)
GCCCGCAACTCCGTCTCCTCCATTCCCATTCCCACCTCTCGATCCAAGGA
ATACACCTCGGTGCCATTGCGTCAATTGGCCTGACTCTGCTATCGGTCTC
TGCATCGCTTTACCTTGTGGATAGACCGTGCTTCATGGTATCTGGCAAAA
CATTTGCTTATACTTCCATACCTTTCTGCTGAAAAGGGAACCAAACAAGA
ATCAAGATACTCGACTTCCCTGCGCCAAACAGCTTCTCACATTGAAACGT
CTTGATCAATATGCAGTCCCACCTAACTAAAAGGGTCTTTCGGGCCATCT
TAAATAATGAGCCTCTTTCATCATCACGCTGTCACTATCGCTTCCTGCAT
ACTGCTCGTTGCCATCGATCCCGCAAACTAGGTCCTCTCTGTCCATACCA
TGTCCAGCGACGCGGGCTCTTCGCCTTTGCGGCCCCAACTGCCGAACCTC
AGCCTGCGATCTTGCCCTCTGAAACTGGATTGAAGCCAATGCGAGACTTG
CTGAGATCACTCAGTGACCAGAGCAGAGGCCCCGCCAACGGAATCCTGGC
AAAAGCTTTCCAGGACTTTGTCGTTGCCCGCGCGGAAACTCCTGGAATCA
TTACGAACTACCATGCGAAGTTGCTTGTTACCACCTGGAAGTATCTCAGA
GCCCGCGAGGGGGAACTGGAACGCATGGAATGGCAGAAGGTCTTTTCAAC
CGAGAACCTCGAGAATCTTCTCTACGTCTTATCGGAAGCAAAATGTTTGC
CAGAGGCGCACGAAACCGTGCGAAAGATGGCTCGGCTAGCCTTCTTGGAG
CTCTGTGCAGACCATGGATTTGGGAACAATCACATTAGCCGTCCTGCCCT
CCTATCTTACATCTATATCCAGGCTATGCTTGGTAACCCGGATGAAGCGC
GGCATGTGGTCGAGAACTTCTGGAACCGACTGAGCAAGACCAGCCCTTCC
CCTTGGCTCACAGTCATGAAAGGCTATGCCATCATCAACGACAGGAATCA
ACTCAGGCGTACCACGGAAAAGCTGAACGAGCACGGCATTGTGTTCGATC
GAACTGCCCATGAAGAGCTGGTCAACATCCTCGTTGAGCAGGATCTTCTA
GCGGCATTAAAAATGGTATATGAGAGTCTCTCGCCTTCCGGAGAAGAACC
TTCTGTCCTCGCCAAGGAAGCCGTCATTCGCTATGCGATCATGAAGGCCG
AGACAGCTTGGGCAACTTCTATCTTTGAGTCGCTTTCGCACGCGCCAGTT
GCGGAGACCATAGGTATCACGCTTCTCTGGGAAGCTGTCCAAACCAAGAG
TGCTGCTGCCGTCCAGGAGAAGGCCAGAATATTGACGGCCGGTAACCAAG
AAGTCAGCGAATCACTCACCATCACATGCGTGAACGATCTGATGGAATAC
GCCAATTCCATCAAGAATCCCGAATTGGCCACAGAGTTCGCATCTCTGGC
CTCCCAGTGGGGCCTGGAACCGGACCTGCAAACTTACCTACTGCGACTGG
AAGCGTACATTCTAGCAGGGGATGTGAAGACTGCATTGAGCTCCATGGAA
GACCTACACGACCCAGAGACCATCATGCTTGAGAACTTGCCATTGATGAA
CAAGCTGATCACCGTCCTCTGCTTTTCAAGTCAGGAGGATGCCGTGGTGG
AGAAAGTGGGCTCCCTCACTGATCCGTTGTTCGAAAATAACGTGCGGTTG
GAGGCAGACACTCTGGCAGCGTTGACGCACATGCTATTGTACCGTCGTGA
GTGGGAGGCTGTCTCCGAGCTCCTTCGTCCCCGTCTGGGGCTCTACGATT
CAGAAGAAAGAACCAAAGTCCGCAATACTCTCACCAACTTCATCACTGAC
CTGACCCAAGAAACCGATGACGCTTGGGAAATGTACAACCTACTTCAACT
CGCGTTTCCCGAATCCGGCGTCAGCCTGCGAACCGAGATCATGACCTCAT
TCTTCAAGCGAGACCGTAGCGACCTCGCCTTCCTAGTCTTCGGACACATG
CGACAAGCAGAAGATTTCGCACGACGACCCAAACCCGACACCTATGCGCG
ATGCTTCCAAGGCCTCGCGCGAACTCAGGACGCCAAGAACCTCGAACTCG
TCCACAACATGCTTAAGCTCGACGTGGAAGTGGACCTCAACACGCGTCTT
CTGAACGGCCTCATGCTCGCATACGCCGCCTGCGATATGCCCGAAAAAGC
GCTGGACGTATTCCGCGACATCCTGCAATCGGACGAAGGCCCCTCCCACA
AAACCATCACCATCTTCTTCAAGACGTGCGAAAAACACCACAACGGAATC
CAGGAGGCCATGCGAATGATGAGCAAGGTCAAGCGCCTCGAAATCACCGT
TGATCGCCAACTATACATGGCATACGTTGAGGCCCTGGCCGCACAGTGCG
AGTTTGACCTCGCCACTGAAGCGCTAGACAAGATGCAGGCTGAAACTGGA
TACCTACCGACCCGCAACTCGTACGTTCAATTCCTTTCACCTTTCAGGTC
TATAAACATGTACTAACGTATTACGCAACGACAGG
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Coding sequence (CDS) from alignment at ch4:2629323..2631857+

>KJC3_005406-T1 ID=KJC3_005406-T1|Name=KJC3_005406-T1|organism=Aspergillus niger KJC3|type=CDS|length=2256bp|location=Sequence derived from alignment at ch4:2629323..2631857+ (Aspergillus niger KJC3)
ATGCAGTCCCACCTAACTAAAAGGGTCTTTCGGGCCATCTTAAATAATGA
GCCTCTTTCATCATCACGCTGTCACTATCGCTTCCTGCATACTGCTCGTT
GCCATCGATCCCGCAAACTAGGTCCTCTCTGTCCATACCATGTCCAGCGA
CGCGGGCTCTTCGCCTTTGCGGCCCCAACTGCCGAACCTCAGCCTGCGAT
CTTGCCCTCTGAAACTGGATTGAAGCCAATGCGAGACTTGCTGAGATCAC
TCAGTGACCAGAGCAGAGGCCCCGCCAACGGAATCCTGGCAAAAGCTTTC
CAGGACTTTGTCGTTGCCCGCGCGGAAACTCCTGGAATCATTACGAACTA
CCATGCGAAGTTGCTTGTTACCACCTGGAAGTATCTCAGAGCCCGCGAGG
GGGAACTGGAACGCATGGAATGGCAGAAGGTCTTTTCAACCGAGAACCTC
GAGAATCTTCTCTACGTCTTATCGGAAGCAAAATGTTTGCCAGAGGCGCA
CGAAACCGTGCGAAAGATGGCTCGGCTAGCCTTCTTGGAGCTCTGTGCAG
ACCATGGATTTGGGAACAATCACATTAGCCGTCCTGCCCTCCTATCTTAC
ATCTATATCCAGGCTATGCTTGGTAACCCGGATGAAGCGCGGCATGTGGT
CGAGAACTTCTGGAACCGACTGAGCAAGACCAGCCCTTCCCCTTGGCTCA
CAGTCATGAAAGGCTATGCCATCATCAACGACAGGAATCAACTCAGGCGT
ACCACGGAAAAGCTGAACGAGCACGGCATTGTGTTCGATCGAACTGCCCA
TGAAGAGCTGGTCAACATCCTCGTTGAGCAGGATCTTCTAGCGGCATTAA
AAATGGTATATGAGAGTCTCTCGCCTTCCGGAGAAGAACCTTCTGTCCTC
GCCAAGGAAGCCGTCATTCGCTATGCGATCATGAAGGCCGAGACAGCTTG
GGCAACTTCTATCTTTGAGTCGCTTTCGCACGCGCCAGTTGCGGAGACCA
TAGGTATCACGCTTCTCTGGGAAGCTGTCCAAACCAAGAGTGCTGCTGCC
GTCCAGGAGAAGGCCAGAATATTGACGGCCGGTAACCAAGAAGTCAGCGA
ATCACTCACCATCACATGCGTGAACGATCTGATGGAATACGCCAATTCCA
TCAAGAATCCCGAATTGGCCACAGAGTTCGCATCTCTGGCCTCCCAGTGG
GGCCTGGAACCGGACCTGCAAACTTACCTACTGCGACTGGAAGCGTACAT
TCTAGCAGGGGATGTGAAGACTGCATTGAGCTCCATGGAAGACCTACACG
ACCCAGAGACCATCATGCTTGAGAACTTGCCATTGATGAACAAGCTGATC
ACCGTCCTCTGCTTTTCAAGTCAGGAGGATGCCGTGGTGGAGAAAGTGGG
CTCCCTCACTGATCCGTTGTTCGAAAATAACGTGCGGTTGGAGGCAGACA
CTCTGGCAGCGTTGACGCACATGCTATTGTACCGTCGTGAGTGGGAGGCT
GTCTCCGAGCTCCTTCGTCCCCGTCTGGGGCTCTACGATTCAGAAGAAAG
AACCAAAGTCCGCAATACTCTCACCAACTTCATCACTGACCTGACCCAAG
AAACCGATGACGCTTGGGAAATGTACAACCTACTTCAACTCGCGTTTCCC
GAATCCGGCGTCAGCCTGCGAACCGAGATCATGACCTCATTCTTCAAGCG
AGACCGTAGCGACCTCGCCTTCCTAGTCTTCGGACACATGCGACAAGCAG
AAGATTTCGCACGACGACCCAAACCCGACACCTATGCGCGATGCTTCCAA
GGCCTCGCGCGAACTCAGGACGCCAAGAACCTCGAACTCGTCCACAACAT
GCTTAAGCTCGACGTGGAAGTGGACCTCAACACGCGTCTTCTGAACGGCC
TCATGCTCGCATACGCCGCCTGCGATATGCCCGAAAAAGCGCTGGACGTA
TTCCGCGACATCCTGCAATCGGACGAAGGCCCCTCCCACAAAACCATCAC
CATCTTCTTCAAGACGTGCGAAAAACACCACAACGGAATCCAGGAGGCCA
TGCGAATGATGAGCAAGGTCAAGCGCCTCGAAATCACCGTTGATCGCCAA
CTATACATGGCATACGTTGAGGCCCTGGCCGCACAGTGCGAGTTTGACCT
CGCCACTGAAGCGCTAGACAAGATGCAGGCTGAAACTGGATACCTACCGA
CCCGCAACTCGTACGTTCAATTCCTTTCACCTTTCAGGTCTATAAACATG
TACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005406KJC3_005406Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005406-T1.utr5p1KJC3_005406-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005406-T1.exon1KJC3_005406-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005406-T1.cdsKJC3_005406-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005406-T1.utr3p1KJC3_005406-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005406-T1KJC3_005406-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011990
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2629323..2631857 +
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