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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2757114..2759811- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005444-T1 ID=KJC3_005444-T1|Name=KJC3_005444-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2698bp|location=Sequence derived from alignment at ch4:2757114..2759811- (Aspergillus niger KJC3)
GCCGCTGCGATCACCATCATTTCACTTCACCACACTTCTCGAGGTCCTTC
ATCCCCGCCGCTCTTTTGACAACACGGTCGAGGCCGCTTCACATTTCTAT
CGAAGCACAATGTCCCTGCCCCCAGAGCAAATTAATATCAAGCGTCGCAG
AGAAGAGGAACCGGTCGAGACTTTATGTAAGACTCCCTTGATTCGTTGCA
TGAGCGGCCCTTCTTTAGTGACGAGGCCCTCAACTGCACAATATCACGAG
CACATCCCCTTTGCTTATGGTCACTCTACCAAGATCCCAGCGCTAATACA
ATTTCCCAGACATTCAGTCAGAGCTGCATCAGACTAAGCGTCGATTCACG
GACTTTGTTTTTCAAAGGGTCCAGATCAGTGGCAATAGCCATGAAGACAG
CTCGTCTAGCCCGTCGTCTTTTTCAGCAGCGCGGAGAAAAGTGCTTACCC
CGCGGTCGGTGAGCAACACCGTCTATCCAACTACTGGGGGCGTGACCAAC
CGCGCTGCTGGTGCAGGAGCAACTGTCCCCTTGGTAAGAGCCACGTCTCC
TGGGGCAGAGTTCCGCGAGGAACGTCGCCTGGCGAACGCTCGGAAAGAGA
ATGAGGAGAAGTTGAGAAGAGCCTTGCTTTCAACGCCTACAGAGAGCCAG
CTGGGAACCCCATCTGCTGTTCCAGCTTCTATTGGATCTGATGCCGCCCG
AAAGGTAGCGTCTTCTGCATCCAGTGAGAGAGAAAGTCTGGCTTCTTCAC
CGGGACGGACGCAATCTCTACGTCGGTTCCAGATTTCTAGATCCACAACG
CCAATGAGCCCGCTCCGTAGCACAGGCGGTGGTGTTCAGAAACGCAAAGA
TGGCGCGGTCGCGGTGCTAGTAGAGAAATTGAGGCGCACGCCGCATTCGA
GACAAGCATCGATGGTCGCTGATGCTGCTGCTCAGGTGGATGAGCAGGCA
AGCATGACGGTTGCAGGCGCTCTGGCCTCGGAGAAACCAGAACGGCCGAG
GAAGCGGCCAGTAGTGAACCAGGCGGAAAAGAAATGGAGAGAGGAGCGTA
AGAGCGCGATCTCAGCTGCTAAACAGCATATCTCACAGGTGCTGGACAGA
GAAGCCGAGGCGGCCCATCAGAGTAATTGGGAGAATGAGTCGGAACGATT
GGCAAGGGAACTGGAGAAAGTGGCTCTGGAGCTGGATTCGGAAATGGATG
TGACGGCGACCGAAACAGACTACACGCAGCTTTCGAGACCGTCTCGGCCT
CCTTCGGTGATGCCCAAGCCTCCGTTGAAATACCAACCGCGCACGCCCAA
TAAGCATCGTGCGGGAGCCTCGGACGCACAAGTGATGCAAGGGCCAGTAG
AGAAACTTGAAGAGGCGGCGAACACTCTGCCTGGGGGGCCTGAGGAGGAG
GAAAGCGACGGGGAGTACGTCTACGACACGTACATACGGAAGCCACTCCC
AGGCACTGGACTGCTTACGGACCCATTAGTCGGTTTGGATACAGACCAGG
AGGCTTGGTTGCGGCAGCATGGCATCGATGCGAATCGCCAAGACATTGGA
GTTATCGTCATCACGCAGGAGGATGAGGAGTACTGGGAGAACTTTGTCGA
GGATGAAGAGGACGAGGACCGGTGGGATAGCGAGGACGCAGATTCGAACG
GTAAGCAGTCGATCGCAATTTTGGCAGAACCTCTGCAGAAAAGGCTAACA
GCACGGGCGTTCCCGGGCAGCTGAAAATAATCCCGCAAATGACTATCCAG
ATGAGGAATTGTCGTGGGACGATGAAGAGGACGATCCAACGGCTATCTAC
AACAAATACCGGACCTACGCTCGGTCTGATGACGAGGAGTTCGACTTTGA
CGACTCAGCCAGTGAGGGGCGCCATCGTAGTGGATTCGGGTTTCGGTCGC
ACGTGGATTCAGACGGCGAGAGCTGGTGATCGGAGGGATTACGGTGACAC
ACGCACACAGAGGGAGACACGCACAAGCCATCAATCGGGAAGCAAGTGAG
CAGGGAATGAGGGCATGGCTGACCGAACAATGAGGCAGCGAGACTAGCTC
GGGTGGCTGCGTCTGCAGAACTCACGCCTTGTTTGGGTTGAGGAATTCAT
CGTATGTATGGTACTTTTAAAGCCATGTTTATTGCTGGCCGTCGATGAGG
ACGACGAGCACCTCGATGAGGCTGGGCTCGAATCGACTCGACTCGACTGA
CCTCTTCGCCATCCTTGAAGTCATCGACGTAGGGCCCTGATTCACCGCAA
GATCAGCAGCCGTCATGCCTCTGCAGAAATAATCTGCATCCGCATCGCTG
CTGCAGGATGAGCTGGGCCGCGACGACAGGACTAGGCCGTAAGCCAAGTC
AACCGATGTCTCCGGCCAGTAAGGACCGTTTCAGAATTGCAGTGGTGTAT
TCTTCCTTCCTTCTTTCCTTTCCCTTTCCTTCCCTTCCTCCGGGGAGAAA
ATGATCGATCCTTCAGCATCTCGGTCTCCCTTTCCCCCCCTTCTCCGTCC
CAACGCAGTAAGAACCACGAGAGCAGCAGACTTGAGCTGATCTCACCACC
ACCACCACCAACCCCCTCCTCCTTCTTCTTATCCCTCCTCTTTCCCCCCA
CGACTCTTAACACACAGACTCCAAAATAAGATTCTAACGGACCGAAGTAA
TGCGGGGTCCAAATCCTTCAGAGAACTCTCAAGCCGATATCATTCGCC back to topCoding sequence (CDS) from alignment at ch4:2757114..2759811- >KJC3_005444-T1 ID=KJC3_005444-T1|Name=KJC3_005444-T1|organism=Aspergillus niger KJC3|type=CDS|length=4851bp|location=Sequence derived from alignment at ch4:2757114..2759811- (Aspergillus niger KJC3)
CTGAAAATAATCCCGCAAATGACTATCCAGATGAGGAATTGTCGTGGGAC
GATGAAGAGGACGATCCAACGGCTATCTACAACAAATACCGGACCTACGC
TCGGTCTGATGACGAGGAGTTCGACTTTGACGACTCAGCCAGTGAGGGGC
GCCATCGTAGTGGATTCGGGTTTCGGTCGCACGTGGATTCAGACGGCGAG
AGCTGGTGAACATTCAGTCAGAGCTGCATCAGACTAAGCGTCGATTCACG
GACTTTGTTTTTCAAAGGGTCCAGATCAGTGGCAATAGCCATGAAGACAG
CTCGTCTAGCCCGTCGTCTTTTTCAGCAGCGCGGAGAAAAGTGCTTACCC
CGCGGTCGGTGAGCAACACCGTCTATCCAACTACTGGGGGCGTGACCAAC
CGCGCTGCTGGTGCAGGAGCAACTGTCCCCTTGGTAAGAGCCACGTCTCC
TGGGGCAGAGTTCCGCGAGGAACGTCGCCTGGCGAACGCTCGGAAAGAGA
ATGAGGAGAAGTTGAGAAGAGCCTTGCTTTCAACGCCTACAGAGAGCCAG
CTGGGAACCCCATCTGCTGTTCCAGCTTCTATTGGATCTGATGCCGCCCG
AAAGGTAGCGTCTTCTGCATCCAGTGAGAGAGAAAGTCTGGCTTCTTCAC
CGGGACGGACGCAATCTCTACGTCGGTTCCAGATTTCTAGATCCACAACG
CCAATGAGCCCGCTCCGTAGCACAGGCGGTGGTGTTCAGAAACGCAAAGA
TGGCGCGGTCGCGGTGCTAGTAGAGAAATTGAGGCGCACGCCGCATTCGA
GACAAGCATCGATGGTCGCTGATGCTGCTGCTCAGGTGGATGAGCAGGCA
AGCATGACGGTTGCAGGCGCTCTGGCCTCGGAGAAACCAGAACGGCCGAG
GAAGCGGCCAGTAGTGAACCAGGCGGAAAAGAAATGGAGAGAGGAGCGTA
AGAGCGCGATCTCAGCTGCTAAACAGCATATCTCACAGGTGCTGGACAGA
GAAGCCGAGGCGGCCCATCAGAGTAATTGGGAGAATGAGTCGGAACGATT
GGCAAGGGAACTGGAGAAAGTGGCTCTGGAGCTGGATTCGGAAATGGATG
TGACGGCGACCGAAACAGACTACACGCAGCTTTCGAGACCGTCTCGGCCT
CCTTCGGTGATGCCCAAGCCTCCGTTGAAATACCAACCGCGCACGCCCAA
TAAGCATCGTGCGGGAGCCTCGGACGCACAAGTGATGCAAGGGCCAGTAG
AGAAACTTGAAGAGGCGGCGAACACTCTGCCTGGGGGGCCTGAGGAGGAG
GAAAGCGACGGGGAGTACGTCTACGACACGTACATACGGAAGCCACTCCC
AGGCACTGGACTGCTTACGGACCCATTAGTCGGTTTGGATACAGACCAGG
AGGCTTGGTTGCGGCAGCATGGCATCGATGCGAATCGCCAAGACATTGGA
GTTATCGTCATCACGCAGGAGGATGAGGAGTACTGGGAGAACTTTGTCGA
GGATGAAGAGGACGAGGACCGGTGGGATAGCGAGGACGCAGATTCGAACG
ATGTCCCTGCCCCCAGAGCAAATTAATATCAAGCGTCGCAGAGAAGAGGA
ACCGGTCGAGACTTTATCTGAAAATAATCCCGCAAATGACTATCCAGATG
AGGAATTGTCGTGGGACGATGAAGAGGACGATCCAACGGCTATCTACAAC
AAATACCGGACCTACGCTCGGTCTGATGACGAGGAGTTCGACTTTGACGA
CTCAGCCAGTGAGGGGCGCCATCGTAGTGGATTCGGGTTTCGGTCGCACG
TGGATTCAGACGGCGAGAGCTGGTGAACATTCAGTCAGAGCTGCATCAGA
CTAAGCGTCGATTCACGGACTTTGTTTTTCAAAGGGTCCAGATCAGTGGC
AATAGCCATGAAGACAGCTCGTCTAGCCCGTCGTCTTTTTCAGCAGCGCG
GAGAAAAGTGCTTACCCCGCGGTCGGTGAGCAACACCGTCTATCCAACTA
CTGGGGGCGTGACCAACCGCGCTGCTGGTGCAGGAGCAACTGTCCCCTTG
GTAAGAGCCACGTCTCCTGGGGCAGAGTTCCGCGAGGAACGTCGCCTGGC
GAACGCTCGGAAAGAGAATGAGGAGAAGTTGAGAAGAGCCTTGCTTTCAA
CGCCTACAGAGAGCCAGCTGGGAACCCCATCTGCTGTTCCAGCTTCTATT
GGATCTGATGCCGCCCGAAAGGTAGCGTCTTCTGCATCCAGTGAGAGAGA
AAGTCTGGCTTCTTCACCGGGACGGACGCAATCTCTACGTCGGTTCCAGA
TTTCTAGATCCACAACGCCAATGAGCCCGCTCCGTAGCACAGGCGGTGGT
GTTCAGAAACGCAAAGATGGCGCGGTCGCGGTGCTAGTAGAGAAATTGAG
GCGCACGCCGCATTCGAGACAAGCATCGATGGTCGCTGATGCTGCTGCTC
AGGTGGATGAGCAGGCAAGCATGACGGTTGCAGGCGCTCTGGCCTCGGAG
AAACCAGAACGGCCGAGGAAGCGGCCAGTAGTGAACCAGGCGGAAAAGAA
ATGGAGAGAGGAGCGTAAGAGCGCGATCTCAGCTGCTAAACAGCATATCT
CACAGGTGCTGGACAGAGAAGCCGAGGCGGCCCATCAGAGTAATTGGGAG
AATGAGTCGGAACGATTGGCAAGGGAACTGGAGAAAGTGGCTCTGGAGCT
GGATTCGGAAATGGATGTGACGGCGACCGAAACAGACTACACGCAGCTTT
CGAGACCGTCTCGGCCTCCTTCGGTGATGCCCAAGCCTCCGTTGAAATAC
CAACCGCGCACGCCCAATAAGCATCGTGCGGGAGCCTCGGACGCACAAGT
GATGCAAGGGCCAGTAGAGAAACTTGAAGAGGCGGCGAACACTCTGCCTG
GGGGGCCTGAGGAGGAGGAAAGCGACGGGGAGTACGTCTACGACACGTAC
ATACGGAAGCCACTCCCAGGCACTGGACTGCTTACGGACCCATTAGTCGG
TTTGGATACAGACCAGGAGGCTTGGTTGCGGCAGCATGGCATCGATGCGA
ATCGCCAAGACATTGGAGTTATCGTCATCACGCAGGAGGATGAGGAGTAC
TGGGAGAACTTTGTCGAGGATGAAGAGGACGAGGACCGGTGGGATAGCGA
GGACGCAGATTCGAACGATGTCCCTGCCCCCAGAGCAAATTAATATCAAG
CGTCGCAGAGAAGAGGAACCGGTCGAGACTTTATCTGAAAATAATCCCGC
AAATGACTATCCAGATGAGGAATTGTCGTGGGACGATGAAGAGGACGATC
CAACGGCTATCTACAACAAATACCGGACCTACGCTCGGTCTGATGACGAG
GAGTTCGACTTTGACGACTCAGCCAGTGAGGGGCGCCATCGTAGTGGATT
CGGGTTTCGGTCGCACGTGGATTCAGACGGCGAGAGCTGGTGAACATTCA
GTCAGAGCTGCATCAGACTAAGCGTCGATTCACGGACTTTGTTTTTCAAA
GGGTCCAGATCAGTGGCAATAGCCATGAAGACAGCTCGTCTAGCCCGTCG
TCTTTTTCAGCAGCGCGGAGAAAAGTGCTTACCCCGCGGTCGGTGAGCAA
CACCGTCTATCCAACTACTGGGGGCGTGACCAACCGCGCTGCTGGTGCAG
GAGCAACTGTCCCCTTGGTAAGAGCCACGTCTCCTGGGGCAGAGTTCCGC
GAGGAACGTCGCCTGGCGAACGCTCGGAAAGAGAATGAGGAGAAGTTGAG
AAGAGCCTTGCTTTCAACGCCTACAGAGAGCCAGCTGGGAACCCCATCTG
CTGTTCCAGCTTCTATTGGATCTGATGCCGCCCGAAAGGTAGCGTCTTCT
GCATCCAGTGAGAGAGAAAGTCTGGCTTCTTCACCGGGACGGACGCAATC
TCTACGTCGGTTCCAGATTTCTAGATCCACAACGCCAATGAGCCCGCTCC
GTAGCACAGGCGGTGGTGTTCAGAAACGCAAAGATGGCGCGGTCGCGGTG
CTAGTAGAGAAATTGAGGCGCACGCCGCATTCGAGACAAGCATCGATGGT
CGCTGATGCTGCTGCTCAGGTGGATGAGCAGGCAAGCATGACGGTTGCAG
GCGCTCTGGCCTCGGAGAAACCAGAACGGCCGAGGAAGCGGCCAGTAGTG
AACCAGGCGGAAAAGAAATGGAGAGAGGAGCGTAAGAGCGCGATCTCAGC
TGCTAAACAGCATATCTCACAGGTGCTGGACAGAGAAGCCGAGGCGGCCC
ATCAGAGTAATTGGGAGAATGAGTCGGAACGATTGGCAAGGGAACTGGAG
AAAGTGGCTCTGGAGCTGGATTCGGAAATGGATGTGACGGCGACCGAAAC
AGACTACACGCAGCTTTCGAGACCGTCTCGGCCTCCTTCGGTGATGCCCA
AGCCTCCGTTGAAATACCAACCGCGCACGCCCAATAAGCATCGTGCGGGA
GCCTCGGACGCACAAGTGATGCAAGGGCCAGTAGAGAAACTTGAAGAGGC
GGCGAACACTCTGCCTGGGGGGCCTGAGGAGGAGGAAAGCGACGGGGAGT
ACGTCTACGACACGTACATACGGAAGCCACTCCCAGGCACTGGACTGCTT
ACGGACCCATTAGTCGGTTTGGATACAGACCAGGAGGCTTGGTTGCGGCA
GCATGGCATCGATGCGAATCGCCAAGACATTGGAGTTATCGTCATCACGC
AGGAGGATGAGGAGTACTGGGAGAACTTTGTCGAGGATGAAGAGGACGAG
GACCGGTGGGATAGCGAGGACGCAGATTCGAACGATGTCCCTGCCCCCAG
AGCAAATTAATATCAAGCGTCGCAGAGAAGAGGAACCGGTCGAGACTTTA
T back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005444-T1.utr3p1 | KJC3_005444-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005444-T1.utr5p1 | KJC3_005444-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013883 |
| DBxref | PFAM:PF08574 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2757114..2759811 - |
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