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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2932218..2933358- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005507-T1 ID=KJC3_005507-T1|Name=KJC3_005507-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1141bp|location=Sequence derived from alignment at ch4:2932218..2933358- (Aspergillus niger KJC3)
ATGGACACCGACGACCTTGACTCCGAAATCTCCTCCATCCGCGCAGAAAG
TACGCCCCAACCCTCCCATCCCCATCCCCCCCCACAAACCAAAACACCAA
CACTAACCCACCCGCGCAGTCCGCACCCTCCAACATCGCCGTCGCATCCT
AACAAGCAGCCTCCTCTCCTCGCGCCCCCTCCAACGCCTTGCCAAATCCC
AACCACCAACTCTCCCTTCCCAACAGCAATGGACCGACATTTCCCCCCTA
ATCCAAAGCACCTCGACCCACGCGCAAACAAATCACCACCGCATCGCCTT
CTCCACAACCACCTTCCCATTCACGGACCCCTCCCCGACATCTGAATCCC
CCAACCTCCTAGGCATCAGGATAGATATTTGTGCGCGCGACGGAACATAC
ACCAAACCGTACTACATACTCCTCCGACGGACAGCACACAAGACACAAGA
TGGGAAGAGGGAAGTGCGCGTGCATAAGCATACCGTTCCGGCGGTGGTGG
ATATGAGGAAGTTGGAGAGGGTGTTTCTGCCGGCTTCATCCATGACTACT
TCTCAGGATGAGGAAGACGCGATGGAAGAGGAGCAGGAGCAGGAGCAACT
GAAACCATGGAAACACAAGGCGCGCAAACAGGATCTCAAGTCCTTTGTTC
GGGAGGTGCGCAAGCAGTTAGTTGTGTGGCATTTACGGTGCGATGCGGTG
CGCTATCTGCGAGAGAAACTGGGCGTCGTGACACGTGGAGTAAATGACGA
CGACGGTATTTATGAGGATGATGAGAGGCCCTGGGAGAGGGATATTCTTG
GCCCTAATGCTTCTACAACGGCTGCTACTGGAGGTTCCGGTGCTGGGGAG
GAGACGCGCATAGCGAAAAATGAACTTGGGATTGTGTCGTTGGCGCCGAC
GGCGTTGGAGGCGGTCTATGTGCGGGTGGAGTGGGAGGATGGGCGCGTGG
GGAGGTTCAAGATCTCTAATACGGGGGTCGTGGAACGGGCGGTGGTGCTT
GGGGATAGTGGTAGAGATAAGCAGACTGAGGGGGTTATTACGGGCGGGGA
CGGGAGGGTTGAGACTTTGCTGGAGCGGTTGGGGAAGCGTCGCGGGAATA
GTAAGGAGGTTGGGTCTGCTTCGCCGGCTTCTGATGTGTGA back to topCoding sequence (CDS) from alignment at ch4:2932218..2933358- >KJC3_005507-T1 ID=KJC3_005507-T1|Name=KJC3_005507-T1|organism=Aspergillus niger KJC3|type=CDS|length=2142bp|location=Sequence derived from alignment at ch4:2932218..2933358- (Aspergillus niger KJC3)
TCCGCACCCTCCAACATCGCCGTCGCATCCTAACAAGCAGCCTCCTCTCC
TCGCGCCCCCTCCAACGCCTTGCCAAATCCCAACCACCAACTCTCCCTTC
CCAACAGCAATGGACCGACATTTCCCCCCTAATCCAAAGCACCTCGACCC
ACGCGCAAACAAATCACCACCGCATCGCCTTCTCCACAACCACCTTCCCA
TTCACGGACCCCTCCCCGACATCTGAATCCCCCAACCTCCTAGGCATCAG
GATAGATATTTGTGCGCGCGACGGAACATACACCAAACCGTACTACATAC
TCCTCCGACGGACAGCACACAAGACACAAGATGGGAAGAGGGAAGTGCGC
GTGCATAAGCATACCGTTCCGGCGGTGGTGGATATGAGGAAGTTGGAGAG
GGTGTTTCTGCCGGCTTCATCCATGACTACTTCTCAGGATGAGGAAGACG
CGATGGAAGAGGAGCAGGAGCAGGAGCAACTGAAACCATGGAAACACAAG
GCGCGCAAACAGGATCTCAAGTCCTTTGTTCGGGAGGTGCGCAAGCAGTT
AGTTGTGTGGCATTTACGGTGCGATGCGGTGCGCTATCTGCGAGAGAAAC
TGGGCGTCGTGACACGTGGAGTAAATGACGACGACGGTATTTATGAGGAT
GATGAGAGGCCCTGGGAGAGGGATATTCTTGGCCCTAATGCTTCTACAAC
GGCTGCTACTGGAGGTTCCGGTGCTGGGGAGGAGACGCGCATAGCGAAAA
ATGAACTTGGGATTGTGTCGTTGGCGCCGACGGCGTTGGAGGCGGTCTAT
GTGCGGGTGGAGTGGGAGGATGGGCGCGTGGGGAGGTTCAAGATCTCTAA
TACGGGGGTCGTGGAACGGGCGGTGGTGCTTGGGGATAGTGGTAGAGATA
AGCAGACTGAGGGGGTTATTACGGGCGGGGACGGGAGGGTTGAGACTTTG
CTGGAGCGGTTGGGGAAGCGTCGCGGGAATAGTAAGGAGGTTGGGTCTGC
TTCGCCGGCTTCTGATGTGTGAATGGACACCGACGACCTTGACTCCGAAA
TCTCCTCCATCCGCGCAGAAATCCGCACCCTCCAACATCGCCGTCGCATC
CTAACAAGCAGCCTCCTCTCCTCGCGCCCCCTCCAACGCCTTGCCAAATC
CCAACCACCAACTCTCCCTTCCCAACAGCAATGGACCGACATTTCCCCCC
TAATCCAAAGCACCTCGACCCACGCGCAAACAAATCACCACCGCATCGCC
TTCTCCACAACCACCTTCCCATTCACGGACCCCTCCCCGACATCTGAATC
CCCCAACCTCCTAGGCATCAGGATAGATATTTGTGCGCGCGACGGAACAT
ACACCAAACCGTACTACATACTCCTCCGACGGACAGCACACAAGACACAA
GATGGGAAGAGGGAAGTGCGCGTGCATAAGCATACCGTTCCGGCGGTGGT
GGATATGAGGAAGTTGGAGAGGGTGTTTCTGCCGGCTTCATCCATGACTA
CTTCTCAGGATGAGGAAGACGCGATGGAAGAGGAGCAGGAGCAGGAGCAA
CTGAAACCATGGAAACACAAGGCGCGCAAACAGGATCTCAAGTCCTTTGT
TCGGGAGGTGCGCAAGCAGTTAGTTGTGTGGCATTTACGGTGCGATGCGG
TGCGCTATCTGCGAGAGAAACTGGGCGTCGTGACACGTGGAGTAAATGAC
GACGACGGTATTTATGAGGATGATGAGAGGCCCTGGGAGAGGGATATTCT
TGGCCCTAATGCTTCTACAACGGCTGCTACTGGAGGTTCCGGTGCTGGGG
AGGAGACGCGCATAGCGAAAAATGAACTTGGGATTGTGTCGTTGGCGCCG
ACGGCGTTGGAGGCGGTCTATGTGCGGGTGGAGTGGGAGGATGGGCGCGT
GGGGAGGTTCAAGATCTCTAATACGGGGGTCGTGGAACGGGCGGTGGTGC
TTGGGGATAGTGGTAGAGATAAGCAGACTGAGGGGGTTATTACGGGCGGG
GACGGGAGGGTTGAGACTTTGCTGGAGCGGTTGGGGAAGCGTCGCGGGAA
TAGTAAGGAGGTTGGGTCTGCTTCGCCGGCTTCTGATGTGTGAATGGACA
CCGACGACCTTGACTCCGAAATCTCCTCCATCCGCGCAGAAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000776 | kinetochore |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0034508 | centromere complex assembly |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018464 |
| DBxref | PFAM:PF09496 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2932218..2933358 - |
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