You are here

Home

KJC3_005553-T1, KJC3_005553-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005553-T1
Unique NameKJC3_005553-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3057970..3058802-

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005553-T1 ID=KJC3_005553-T1|Name=KJC3_005553-T1|organism=Aspergillus niger KJC3|type=mRNA|length=833bp|location=Sequence derived from alignment at ch4:3057970..3058802- (Aspergillus niger KJC3)
CGATCAGTCAGGGGAAAGAAACCTGGAGAGTGAGGAGAACCACTGCGCGG
TTTTGCTTTCTCCTCTTCTTGCTGGCTGGCGCTTCCCAATAACAACTCTT
TCTTTTCTTTTTTGTCCATGACGAAGCCTACGAGATAATTGATACTGGTT
CTTGTTTTTACGTGCAGCGCGCAGGACGCCATCGAATCTACCCACCACCA
CCACCACCACTACTCTTTACCCACACCCGCACACACACACCCACCATGCG
CATCCTCCCCCTCCTAATCACCTACCTCTTCCTCCCCATAATCACCGCCA
AATTCAGCCCCATCTGCATCCGTGTCCTCGGCGCACTGACCGGCCGCCCC
AATGATCTCTTTACCAAATTCCAGCGCGAAATCTGCGACCAAGGGTGCCA
ACCCACCGTACCACACTGGGACCTCTGGACGCGCAACAATACCTTCCTCC
CGGCGGTGCGCAGCCTCATGAAACACGTCGATAATCCGCGCCAGGAAGAG
GCGATGGTGCGGCTAGGCGACGATGTAGCGGACGTAATCAAGCGACAATG
CGGGCCATTGTTGCAAGGGCGGGATATCTGCTCGGATGATGAGACGTTGG
CGGCGTTTGGGACATGTTTCAAGAAAGGGTTTGTGCGGGCGGCATTAACT
AATTTGCCGACGTTGCTGCCGCTGGCGTCGGAGGAGGTGTGTCGCGAGCA
GTATGAGTGGTTGCAGAAGGATGAGTTGTGGGAGGTGATTATTCCGGGGA
AAATGCGGGAGTATGCGGGTGTTTGTCGGGGGTTGGGAGGGGAATTGGGT
GCGATGTTGGTGGAGGAGTTGTTGAGTGGGTAA
back to top

Coding sequence (CDS) from alignment at ch4:3057970..3058802-

>KJC3_005553-T1 ID=KJC3_005553-T1|Name=KJC3_005553-T1|organism=Aspergillus niger KJC3|type=CDS|length=588bp|location=Sequence derived from alignment at ch4:3057970..3058802- (Aspergillus niger KJC3)
ATGCGCATCCTCCCCCTCCTAATCACCTACCTCTTCCTCCCCATAATCAC
CGCCAAATTCAGCCCCATCTGCATCCGTGTCCTCGGCGCACTGACCGGCC
GCCCCAATGATCTCTTTACCAAATTCCAGCGCGAAATCTGCGACCAAGGG
TGCCAACCCACCGTACCACACTGGGACCTCTGGACGCGCAACAATACCTT
CCTCCCGGCGGTGCGCAGCCTCATGAAACACGTCGATAATCCGCGCCAGG
AAGAGGCGATGGTGCGGCTAGGCGACGATGTAGCGGACGTAATCAAGCGA
CAATGCGGGCCATTGTTGCAAGGGCGGGATATCTGCTCGGATGATGAGAC
GTTGGCGGCGTTTGGGACATGTTTCAAGAAAGGGTTTGTGCGGGCGGCAT
TAACTAATTTGCCGACGTTGCTGCCGCTGGCGTCGGAGGAGGTGTGTCGC
GAGCAGTATGAGTGGTTGCAGAAGGATGAGTTGTGGGAGGTGATTATTCC
GGGGAAAATGCGGGAGTATGCGGGTGTTTGTCGGGGGTTGGGAGGGGAAT
TGGGTGCGATGTTGGTGGAGGAGTTGTTGAGTGGGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005553KJC3_005553Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005553-T1.cdsKJC3_005553-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005553-T1.exon1KJC3_005553-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005553-T1.utr5p1KJC3_005553-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005553-T1KJC3_005553-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3057970..3058802 -
Powered by Drupal