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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3075229..3076956- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005562-T1 ID=KJC3_005562-T1|Name=KJC3_005562-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1728bp|location=Sequence derived from alignment at ch4:3075229..3076956- (Aspergillus niger KJC3)
GGATTCTCCAACAATAGATTCTAGTACTACACTTCCGACCTTGTGGCAAG
CAGACGACCTTCTCGATCGGTCTTAGAGCTAATAAGACCGCAACGATGGA
TGCATCGGATTCGCCCCATGGAAAACATTCGGGTCCGTTGTCTGGACGGG
GCGGAAATCCATCTCTTCGCGAGCTTCTCGGTTTGAGTTGGAAACTTTAC
CCACTGCGGGATGAGCAGAACAAAGAACGGGTTCAACATTCTGGACGGCG
TCGCCCACTGTGGCTGGCACTGACTAAGTTTGCCTTCAAATCTTCAAGGA
AACTCGATATTTCATCGCCGTCGGCACATGTCGGTGAACATCAGATCATT
ACTTCGTTCGTTTAGATCTCTGACACTCGTTTAAAATTACCCTGCCCAAC
TATTGGGTTTGATTTGCTGTTTTTCAAGCGATATCTGCAGTGCTCGCAGC
ATGGCCCGTCTCGCTGTCCGCCAGAATGGGTCTTGTCCGGCCGATGCGCA
GTGGTATGTCTGCGCTGCTGGTGGGTTCAAGGGCTGCTGTTCGGTCGATC
CGTGCACGACGGGGGTTTGTCCGGATGAGAGTGGCAGCAGTGGAAGCACT
AGAAGCAGTAGTAGTTCTTCTTCGGTGGATTCTGTCCCTGCTACGAAGGA
TGGGCCCGTGACTTTGACGACTTTGGTTCAAGAGCCTGCCACATCCATAT
TATCTACTTCCTCTGCATCATCATCATCATCATCATCTACTCCTATTTCT
TCGTCAGAAACCAGCACAGAGGCTCCATCATCTGTTAGGAGTACATCGAC
AGCCTCAAGAGCTTCTTCCACAACGATGGCCACAACCACATCCTCAACTC
CAAATCAAGATCCTACCACAACACTCTCTTCGACAACATCAACACACTCT
TCCCACTCCACCACTACCCAAGCCAGCCTCGCAACATCCCAAGGCTCAGG
CACATGGCACCCCACCGCAGCCCTAATAGGGGGAACAGTGGCCGGCGCAG
TAGGCCTCCTCCTATTCATCATCCTACTAGTATTCTGCGTCCAGCGTGCT
CGAAAGCGAAGACACCAGACATTTAGATTGCTACGATGGCGCAGTGGACA
TAACAGCGAACCCAAGTCACCAAACGGTATACATCCTCAAGCTCCACCCT
GACCATCACATTCGCCCATCTCATGATAGCAGACTAACCTATCCCCAGGA
ACCTCTCCCCGCCTACCACCAACAGCAAGAACCAGACCCAGACCTAGAAG
CAGATGCACCTCCCTCCTACCCAAGTACACTCATCACACTCACACCCACA
AGTACAAGCACAGTCACAGCCACGCACCATCCCTCCCCCCCTCACATTCC
CCGACTCAGCACCCTCCTACCCCTACAAAAAGAACCGAGCCGCTGAGCTC
AGCGACACGGGATTCTACCGACCTCGTGCTGAGCTCCCCGCTCAATCATC
TCGGGAATTGATCAATATACCCGCTGAGAGACGATGTCGATGGGACTGTG
ATGGTGGGGATGGGGCGTCGGATATGATTGTTACGGCTGATGGGGCGGTC
CTGAGGGCGACGATTAAGACGGTGGAGGCGGATAGCCCTTTTGCTATCTA
TGATGATGATGCTAGGACTACCACTAGGGATGAAGGTCCGCCACAGTATT
CTGGGGTTGAGTATGGGATGAGCGGAGGGTGTAGGGTTTGGGAGGATGAT
AAGAATAGGATATAATATCACTTGGTAG back to topCoding sequence (CDS) from alignment at ch4:3075229..3076956- >KJC3_005562-T1 ID=KJC3_005562-T1|Name=KJC3_005562-T1|organism=Aspergillus niger KJC3|type=CDS|length=1878bp|location=Sequence derived from alignment at ch4:3075229..3076956- (Aspergillus niger KJC3)
GAACCTCTCCCCGCCTACCACCAACAGCAAGAACCAGACCCAGACCTAGA
AGCAGATGCACCTCCCTCCTACCCAAGTACACTCATCACACTCACACCCA
CAAGTACAAGCACAGTCACAGCCACGCACCATCCCTCCCCCCCTCACATT
CCCCGACTCAGCACCCTCCTACCCCTACAAAAAGAACCGAGCCGCTGAGC
TCAGCGACACGGGATTCTACCGACCTCGTGCTGAGCTCCCCGCTCAATCA
TCTCGGGAATTGAATGGCCCGTCTCGCTGTCCGCCAGAATGGGTCTTGTC
CGGCCGATGCGCAGTGGTATGTCTGCGCTGCTGGTGGGTTCAAGGGCTGC
TGTTCGGTCGATCCGTGCACGACGGGGGTTTGTCCGGATGAGAGTGGCAG
CAGTGGAAGCACTAGAAGCAGTAGTAGTTCTTCTTCGGTGGATTCTGTCC
CTGCTACGAAGGATGGGCCCGTGACTTTGACGACTTTGGTTCAAGAGCCT
GCCACATCCATATTATCTACTTCCTCTGCATCATCATCATCATCATCATC
TACTCCTATTTCTTCGTCAGAAACCAGCACAGAGGCTCCATCATCTGTTA
GGAGTACATCGACAGCCTCAAGAGCTTCTTCCACAACGATGGCCACAACC
ACATCCTCAACTCCAAATCAAGATCCTACCACAACACTCTCTTCGACAAC
ATCAACACACTCTTCCCACTCCACCACTACCCAAGCCAGCCTCGCAACAT
CCCAAGGCTCAGGCACATGGCACCCCACCGCAGCCCTAATAGGGGGAACA
GTGGCCGGCGCAGTAGGCCTCCTCCTATTCATCATCCTACTAGTATTCTG
CGTCCAGCGTGCTCGAAAGCGAAGACACCAGACATTTAGATTGCTACGAT
GGCGCAGTGGACATAACAGCGAACCCAAGTCACCAAACGGAACCTCTCCC
CGCCTACCACCAACAGCAAGAACCAGACCCAGACCTAGAAGCAGATGCAC
CTCCCTCCTACCCAAGTACACTCATCACACTCACACCCACAAGTACAAGC
ACAGTCACAGCCACGCACCATCCCTCCCCCCCTCACATTCCCCGACTCAG
CACCCTCCTACCCCTACAAAAAGAACCGAGCCGCTGAGCTCAGCGACACG
GGATTCTACCGACCTCGTGCTGAGCTCCCCGCTCAATCATCTCGGGAATT
GAATGGCCCGTCTCGCTGTCCGCCAGAATGGGTCTTGTCCGGCCGATGCG
CAGTGGTATGTCTGCGCTGCTGGTGGGTTCAAGGGCTGCTGTTCGGTCGA
TCCGTGCACGACGGGGGTTTGTCCGGATGAGAGTGGCAGCAGTGGAAGCA
CTAGAAGCAGTAGTAGTTCTTCTTCGGTGGATTCTGTCCCTGCTACGAAG
GATGGGCCCGTGACTTTGACGACTTTGGTTCAAGAGCCTGCCACATCCAT
ATTATCTACTTCCTCTGCATCATCATCATCATCATCATCTACTCCTATTT
CTTCGTCAGAAACCAGCACAGAGGCTCCATCATCTGTTAGGAGTACATCG
ACAGCCTCAAGAGCTTCTTCCACAACGATGGCCACAACCACATCCTCAAC
TCCAAATCAAGATCCTACCACAACACTCTCTTCGACAACATCAACACACT
CTTCCCACTCCACCACTACCCAAGCCAGCCTCGCAACATCCCAAGGCTCA
GGCACATGGCACCCCACCGCAGCCCTAATAGGGGGAACAGTGGCCGGCGC
AGTAGGCCTCCTCCTATTCATCATCCTACTAGTATTCTGCGTCCAGCGTG
CTCGAAAGCGAAGACACCAGACATTTAGATTGCTACGATGGCGCAGTGGA
CATAACAGCGAACCCAAGTCACCAAACG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005562-T1.utr3p1 | KJC3_005562-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005562-T1.utr5p1 | KJC3_005562-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3075229..3076956 - |
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