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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3102664..3104382- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005570-T1 ID=KJC3_005570-T1|Name=KJC3_005570-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1719bp|location=Sequence derived from alignment at ch4:3102664..3104382- (Aspergillus niger KJC3)
ATGTCCAAGACCAAGTCCGTTACCAAGAAGGGCTCTGAGAAGCCGGTTGA
CAAGACCCTTAGCAAGGTCAAGTCTGCTGGTGTGACCAAGTCCTCCCAGT
CCCCCAAGGCCAAGAGCAAGCAGATTGCTCGTGAGGTTGCCTCCAAGGAG
AAGAAGGACAAGAAGAAGAAGAAGGAGCCTACTCCCAGCGAGTCTTCCGA
GTCCGAGTCCGACAGCGACGAGGAGATGGCCTCCGACTCCAGCTCCAGCA
GCGAGAGTGAGGACGAGAAGCCCGCCAAGAAGACTGAGAAGAAGGGCAAG
AAGGTTGAGTCCGAGTCCGAGTCTTCCGAGTCTGAGTCTGAGTCCGACTC
TGACAGCGATGAGGAGATGAACGACGCCTCTAGCAGCGAGAGCGAGGAGG
AGGAGAAGCCTGCCAAGAAGACCAAGGAGGAGCCCAAGAAGGCTGCCAAG
AAGGCTGAGTCCAGCGACTCTGAGTCTGAGTCTTCTGACTCTGACTCCGA
GTCCGAGGATGAGAAGCCTGCTAAGAAGGAGACCAAGAAGGCTGAGTCCG
AGTCTGAGTCTTCCGACTCTGACTCTGACTCCTCCTCTGAGGAGGAGGCC
CCCAAGAAGGCCGCCAAGAAGGAGTCCAGCGACAGCGACTCTGACTCCGA
CTCCGACTCTGACTCTGAGAGCGAGGAGGAGACCAAGGAGAAGAAGGCCG
AGAAGGTATGCTGATTCATTCCTTTCATTCAAGTCTTATGCTAACGACCA
CAGGAGTCTTCCGACTCTTCTGACTCCGACTCCTCCGACTCCGACTCTGA
CTCCGAGTCTGAGGAGAGCGAGAAGCCCTCCAAGAAGCGTAAGGCTGAGG
AGGAGACCTCCGCTACCCCCAAGAAGTCCAAGACTGAGGATCCTGCTCCT
GGTGCTTCTGCCAACCTGTTCGTCGGTAACCTGTCCTGGAACGTCGATGA
GGCTTGGCTCCAGTCCGAGTTCGAGAGCTTCGGTGAGCTCTCCGGTGTTC
GTATCATGACTGAGCGTGACACTGGCCGCTCTCGTGGGTGAGTACAGTCT
TTGTCCATAACTATCGAGCAACTGCTAACCCCTTCCAGTTTCGGTTACGT
TGAGTACACCAACGCTGTCGATGCCGCCAAGGCCTTCGAGGCCAAGAAGG
GTGCTGAGATCGACGGACGTGTGATCAACCTGGACTATGCCACTGGCCGT
CCCGCCAACAAGGACCAGCAGGGTGGTTTCAAGGACCGCGCCAACGCTCG
TGCCCGTTCCTTCGGTGACCAGGCCAGCCCCGAGAGTGACACCCTCTTCG
TCGGCAACCTTCCCTTCGATGCCAACGAGGACTCGGTCGGCGAGCTGTTC
GGTGAGAAGGGTAGCATCCTCGGCATCCGCCTGCCCACCGACCCCGACTC
TGGCCGCCCCAAGGGCTTCGGCTACGTCCAGTACTCCTCTGTCGACGAGG
CCCGCGCTGCCTTCAACGAGCTCCAGGGTGCTGACCTGCTCGGACGCCCG
GTGCGTCTGGACTTCAGCACTCCCCGTGCCAACAACGGCGGCGGCGGTGG
TGGTCGCGGTGGTGGCCGTGGCGGCTTCGGCGGTCGTGGCGGTGGTCGTG
GTGGCTTCGGTGATCGTGGTGGCCGTGGCCGTGGTGGCTTCGGTGGCCGC
GGTGGTGGTGCCCCCAACAAGGCTCGTGGTGGTATCCCCGAGTACAAGGG
CACCAAGGTCACTTTCTAA back to topCoding sequence (CDS) from alignment at ch4:3102664..3104382- >KJC3_005570-T1 ID=KJC3_005570-T1|Name=KJC3_005570-T1|organism=Aspergillus niger KJC3|type=CDS|length=4860bp|location=Sequence derived from alignment at ch4:3102664..3104382- (Aspergillus niger KJC3)
TTTCGGTTACGTTGAGTACACCAACGCTGTCGATGCCGCCAAGGCCTTCG
AGGCCAAGAAGGGTGCTGAGATCGACGGACGTGTGATCAACCTGGACTAT
GCCACTGGCCGTCCCGCCAACAAGGACCAGCAGGGTGGTTTCAAGGACCG
CGCCAACGCTCGTGCCCGTTCCTTCGGTGACCAGGCCAGCCCCGAGAGTG
ACACCCTCTTCGTCGGCAACCTTCCCTTCGATGCCAACGAGGACTCGGTC
GGCGAGCTGTTCGGTGAGAAGGGTAGCATCCTCGGCATCCGCCTGCCCAC
CGACCCCGACTCTGGCCGCCCCAAGGGCTTCGGCTACGTCCAGTACTCCT
CTGTCGACGAGGCCCGCGCTGCCTTCAACGAGCTCCAGGGTGCTGACCTG
CTCGGACGCCCGGTGCGTCTGGACTTCAGCACTCCCCGTGCCAACAACGG
CGGCGGCGGTGGTGGTCGCGGTGGTGGCCGTGGCGGCTTCGGCGGTCGTG
GCGGTGGTCGTGGTGGCTTCGGTGATCGTGGTGGCCGTGGCCGTGGTGGC
TTCGGTGGCCGCGGTGGTGGTGCCCCCAACAAGGCTCGTGGTGGTATCCC
CGAGTACAAGGGCACCAAGGTCACTTTCTAAGAGTCTTCCGACTCTTCTG
ACTCCGACTCCTCCGACTCCGACTCTGACTCCGAGTCTGAGGAGAGCGAG
AAGCCCTCCAAGAAGCGTAAGGCTGAGGAGGAGACCTCCGCTACCCCCAA
GAAGTCCAAGACTGAGGATCCTGCTCCTGGTGCTTCTGCCAACCTGTTCG
TCGGTAACCTGTCCTGGAACGTCGATGAGGCTTGGCTCCAGTCCGAGTTC
GAGAGCTTCGGTGAGCTCTCCGGTGTTCGTATCATGACTGAGCGTGACAC
TGGCCGCTCTCGTGGATGTCCAAGACCAAGTCCGTTACCAAGAAGGGCTC
TGAGAAGCCGGTTGACAAGACCCTTAGCAAGGTCAAGTCTGCTGGTGTGA
CCAAGTCCTCCCAGTCCCCCAAGGCCAAGAGCAAGCAGATTGCTCGTGAG
GTTGCCTCCAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGCCTACTCC
CAGCGAGTCTTCCGAGTCCGAGTCCGACAGCGACGAGGAGATGGCCTCCG
ACTCCAGCTCCAGCAGCGAGAGTGAGGACGAGAAGCCCGCCAAGAAGACT
GAGAAGAAGGGCAAGAAGGTTGAGTCCGAGTCCGAGTCTTCCGAGTCTGA
GTCTGAGTCCGACTCTGACAGCGATGAGGAGATGAACGACGCCTCTAGCA
GCGAGAGCGAGGAGGAGGAGAAGCCTGCCAAGAAGACCAAGGAGGAGCCC
AAGAAGGCTGCCAAGAAGGCTGAGTCCAGCGACTCTGAGTCTGAGTCTTC
TGACTCTGACTCCGAGTCCGAGGATGAGAAGCCTGCTAAGAAGGAGACCA
AGAAGGCTGAGTCCGAGTCTGAGTCTTCCGACTCTGACTCTGACTCCTCC
TCTGAGGAGGAGGCCCCCAAGAAGGCCGCCAAGAAGGAGTCCAGCGACAG
CGACTCTGACTCCGACTCCGACTCTGACTCTGAGAGCGAGGAGGAGACCA
AGGAGAAGAAGGCCGAGAAGTTTCGGTTACGTTGAGTACACCAACGCTGT
CGATGCCGCCAAGGCCTTCGAGGCCAAGAAGGGTGCTGAGATCGACGGAC
GTGTGATCAACCTGGACTATGCCACTGGCCGTCCCGCCAACAAGGACCAG
CAGGGTGGTTTCAAGGACCGCGCCAACGCTCGTGCCCGTTCCTTCGGTGA
CCAGGCCAGCCCCGAGAGTGACACCCTCTTCGTCGGCAACCTTCCCTTCG
ATGCCAACGAGGACTCGGTCGGCGAGCTGTTCGGTGAGAAGGGTAGCATC
CTCGGCATCCGCCTGCCCACCGACCCCGACTCTGGCCGCCCCAAGGGCTT
CGGCTACGTCCAGTACTCCTCTGTCGACGAGGCCCGCGCTGCCTTCAACG
AGCTCCAGGGTGCTGACCTGCTCGGACGCCCGGTGCGTCTGGACTTCAGC
ACTCCCCGTGCCAACAACGGCGGCGGCGGTGGTGGTCGCGGTGGTGGCCG
TGGCGGCTTCGGCGGTCGTGGCGGTGGTCGTGGTGGCTTCGGTGATCGTG
GTGGCCGTGGCCGTGGTGGCTTCGGTGGCCGCGGTGGTGGTGCCCCCAAC
AAGGCTCGTGGTGGTATCCCCGAGTACAAGGGCACCAAGGTCACTTTCTA
AGAGTCTTCCGACTCTTCTGACTCCGACTCCTCCGACTCCGACTCTGACT
CCGAGTCTGAGGAGAGCGAGAAGCCCTCCAAGAAGCGTAAGGCTGAGGAG
GAGACCTCCGCTACCCCCAAGAAGTCCAAGACTGAGGATCCTGCTCCTGG
TGCTTCTGCCAACCTGTTCGTCGGTAACCTGTCCTGGAACGTCGATGAGG
CTTGGCTCCAGTCCGAGTTCGAGAGCTTCGGTGAGCTCTCCGGTGTTCGT
ATCATGACTGAGCGTGACACTGGCCGCTCTCGTGGATGTCCAAGACCAAG
TCCGTTACCAAGAAGGGCTCTGAGAAGCCGGTTGACAAGACCCTTAGCAA
GGTCAAGTCTGCTGGTGTGACCAAGTCCTCCCAGTCCCCCAAGGCCAAGA
GCAAGCAGATTGCTCGTGAGGTTGCCTCCAAGGAGAAGAAGGACAAGAAG
AAGAAGAAGGAGCCTACTCCCAGCGAGTCTTCCGAGTCCGAGTCCGACAG
CGACGAGGAGATGGCCTCCGACTCCAGCTCCAGCAGCGAGAGTGAGGACG
AGAAGCCCGCCAAGAAGACTGAGAAGAAGGGCAAGAAGGTTGAGTCCGAG
TCCGAGTCTTCCGAGTCTGAGTCTGAGTCCGACTCTGACAGCGATGAGGA
GATGAACGACGCCTCTAGCAGCGAGAGCGAGGAGGAGGAGAAGCCTGCCA
AGAAGACCAAGGAGGAGCCCAAGAAGGCTGCCAAGAAGGCTGAGTCCAGC
GACTCTGAGTCTGAGTCTTCTGACTCTGACTCCGAGTCCGAGGATGAGAA
GCCTGCTAAGAAGGAGACCAAGAAGGCTGAGTCCGAGTCTGAGTCTTCCG
ACTCTGACTCTGACTCCTCCTCTGAGGAGGAGGCCCCCAAGAAGGCCGCC
AAGAAGGAGTCCAGCGACAGCGACTCTGACTCCGACTCCGACTCTGACTC
TGAGAGCGAGGAGGAGACCAAGGAGAAGAAGGCCGAGAAGTTTCGGTTAC
GTTGAGTACACCAACGCTGTCGATGCCGCCAAGGCCTTCGAGGCCAAGAA
GGGTGCTGAGATCGACGGACGTGTGATCAACCTGGACTATGCCACTGGCC
GTCCCGCCAACAAGGACCAGCAGGGTGGTTTCAAGGACCGCGCCAACGCT
CGTGCCCGTTCCTTCGGTGACCAGGCCAGCCCCGAGAGTGACACCCTCTT
CGTCGGCAACCTTCCCTTCGATGCCAACGAGGACTCGGTCGGCGAGCTGT
TCGGTGAGAAGGGTAGCATCCTCGGCATCCGCCTGCCCACCGACCCCGAC
TCTGGCCGCCCCAAGGGCTTCGGCTACGTCCAGTACTCCTCTGTCGACGA
GGCCCGCGCTGCCTTCAACGAGCTCCAGGGTGCTGACCTGCTCGGACGCC
CGGTGCGTCTGGACTTCAGCACTCCCCGTGCCAACAACGGCGGCGGCGGT
GGTGGTCGCGGTGGTGGCCGTGGCGGCTTCGGCGGTCGTGGCGGTGGTCG
TGGTGGCTTCGGTGATCGTGGTGGCCGTGGCCGTGGTGGCTTCGGTGGCC
GCGGTGGTGGTGCCCCCAACAAGGCTCGTGGTGGTATCCCCGAGTACAAG
GGCACCAAGGTCACTTTCTAAGAGTCTTCCGACTCTTCTGACTCCGACTC
CTCCGACTCCGACTCTGACTCCGAGTCTGAGGAGAGCGAGAAGCCCTCCA
AGAAGCGTAAGGCTGAGGAGGAGACCTCCGCTACCCCCAAGAAGTCCAAG
ACTGAGGATCCTGCTCCTGGTGCTTCTGCCAACCTGTTCGTCGGTAACCT
GTCCTGGAACGTCGATGAGGCTTGGCTCCAGTCCGAGTTCGAGAGCTTCG
GTGAGCTCTCCGGTGTTCGTATCATGACTGAGCGTGACACTGGCCGCTCT
CGTGGATGTCCAAGACCAAGTCCGTTACCAAGAAGGGCTCTGAGAAGCCG
GTTGACAAGACCCTTAGCAAGGTCAAGTCTGCTGGTGTGACCAAGTCCTC
CCAGTCCCCCAAGGCCAAGAGCAAGCAGATTGCTCGTGAGGTTGCCTCCA
AGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGCCTACTCCCAGCGAGTCT
TCCGAGTCCGAGTCCGACAGCGACGAGGAGATGGCCTCCGACTCCAGCTC
CAGCAGCGAGAGTGAGGACGAGAAGCCCGCCAAGAAGACTGAGAAGAAGG
GCAAGAAGGTTGAGTCCGAGTCCGAGTCTTCCGAGTCTGAGTCTGAGTCC
GACTCTGACAGCGATGAGGAGATGAACGACGCCTCTAGCAGCGAGAGCGA
GGAGGAGGAGAAGCCTGCCAAGAAGACCAAGGAGGAGCCCAAGAAGGCTG
CCAAGAAGGCTGAGTCCAGCGACTCTGAGTCTGAGTCTTCTGACTCTGAC
TCCGAGTCCGAGGATGAGAAGCCTGCTAAGAAGGAGACCAAGAAGGCTGA
GTCCGAGTCTGAGTCTTCCGACTCTGACTCTGACTCCTCCTCTGAGGAGG
AGGCCCCCAAGAAGGCCGCCAAGAAGGAGTCCAGCGACAGCGACTCTGAC
TCCGACTCCGACTCTGACTCTGAGAGCGAGGAGGAGACCAAGGAGAAGAA
GGCCGAGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR034276 |
| DBxref | InterPro:IPR034272 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3102664..3104382 - |
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