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KJC3_005589-T1, KJC3_005589-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005589-T1
Unique NameKJC3_005589-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3159739..3161690+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005589-T1 ID=KJC3_005589-T1|Name=KJC3_005589-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1952bp|location=Sequence derived from alignment at ch4:3159739..3161690+ (Aspergillus niger KJC3)
CCTGTATCCGGTATGGATCGTTTCATACAGAACAGGCTCGAACAGGAAAG
TCTTGGCGGGCAAGCCCGGACTGTGCGATGAAATTCAAACTAGTCTGACG
ACGCCGACAACGTGAGCCCGCCAGCACCCCGCAAGGATTTCCGCCTCATC
TCGCAAGTCTTAGTCGACTCCGGTTACAGAGGACATATACCTCTGATTCA
GCATCTTCTCTCCCTCCGTCGCCTTACCCAGATTCACAGCTTGATCGGCC
CAAAATGCGGCCTATTTTGCTCTCCGGCCATGTGCGTTTCGCCTATACCC
ACCCCCGAACGCGATGATGGTCGCCCAGGAGCTAGGAACATGATATGAAA
ATCGGGAAATAAAAGGGAATAAGGACGGGTCGCTGATTGATTTTTTGCTT
AATAGGAACGGTCTCTGAACCAAATCAAGTTCAACCGCGATGGCGATCTT
ATCTTCTCCGTGGCTAAGGATAAAATTGTGTGCGCCTGGTGGTCGGCCAA
CGGCGAGCGACTCGGTACCTACAATGGACACCAGGGTGCTATCTGGACGG
TCGATGTGAGCCCGAACACTCAGATTCTGGCAACCGGTTCGGCAGACAAC
ACCGTGCGACTATGGAACGTGAAGACCGGCGAGTGCATCAAGGTGTGGGA
CTTCCCTACGGCCGTCAAGCGGGTCGAGTTCACCCCCGATGGAAGCAGAC
TGTTGGCTGTGACGGAGAAGCGTATGGGTTTCTTGGGTACCATTGCGGTG
TTGGATATCAACTACGGCGAGAACTTGACGGAGCAGGCTGAGGAGCCTAG
CTTGCGCATCACCTGCACAGAGAGCAAGGCAACGGTTGCGGGCTGGAGTT
ACATGGGCAAGTACATCATTGCTGGTCACGAAGACGGCAGTGTCAGCCAG
TACGATGGAAAGGTGCGGAGAAATGCTTGTGTTTTGTTATGCATTTGGGG
CTAGATGCTAACTGGGTGATGACAGACCGGTGAGCAGCTGGAGAACGTCC
AGGCCCACGAGTTCGACCACCAGATCAACGACATCCAGTTCTCCGCCGAC
CGCACCTACTTCATCACTGCCTCCAAGGACAAGTCCGCCAAGGTACATAA
GCCTGCTACTATGCATGTCAAACGATTTTAAATGCTAACTCAACCCAGCT
CATGTCTACCCGTAACCTCGCCATCCTCAAAACCTATGTTGCCGACACTC
CCCTGAACAGCGCCACCATTACGCCCAAGAAGGACTACGTGATCCTGGGA
GGTGGTCAGGCCGCCATGGATGTCACCACGACCTCGGCCCGCCAGGGTAA
GTTCGAGGCTCGTTTCTACCACAAGGTCTTCGAGGACGAGATCGGTCGTG
TCCGTGGTCATTTCGGTCCCCTCAACACGGTTCACATCCACCCCGCCGGT
ACTGCCTACGCCTCTGGAGGTGAGGACGGTTACGTCCGTGTGCACCACTT
CGACAAGCCCTACTTCGACTTCATGTACGAGGTCGAGCGCGAGCAGCTGA
GGAAGTGAAGTGTGAAGCGAGTGTGACGAAAGTTTTGCAAGAGTTTTTCT
AGTTTTTTTCCTCCCCCTATCTTACCTACCTACCAGTTTTAAAACACGCA
TCGTGTGTGTATGTGTTCATGAGGCGAAGATGATATCATTTTTCTCCTTT
ACTTACTACAAAAGAAACCAAAAGTAGCAAGGACAGGCAGCACGGCGGTA
CGAGAAAGAGACCTCGGGGCGATTCAGGGCATGAGTTCTTTTTCATCATT
TCTTAACCATGATAAAGTCGGAGTTGGTACCATTTGCTTTTCTGGTCGCT
TTCTTGTGTCCTAATAAAAGAAACTACATTGCTTCATTTCCTCTTTCAAG
TTCACGCTATTATTAGTGGCTGGTTCTCATGAACATAAATGTACAGAGCC
ATCCGCAACCATATTCCACATTATATTATACATATAACGAGCTGGTTTCG
AC
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Coding sequence (CDS) from alignment at ch4:3159739..3161690+

>KJC3_005589-T1 ID=KJC3_005589-T1|Name=KJC3_005589-T1|organism=Aspergillus niger KJC3|type=CDS|length=4044bp|location=Sequence derived from alignment at ch4:3159739..3161690+ (Aspergillus niger KJC3)
ATGCGGCCTATTTTGCTCTCCGGCCATGAACGGTCTCTGAACCAAATCAA
GTTCAACCGCGATGGCGATCTTATCTTCTCCGTGGCTAAGGATAAAATTG
TGTGCGCCTGGTGGTCGGCCAACGGCGAGCGACTCGGTACCTACAATGGA
CACCAGGGTGCTATCTGGACGGTCGATGTGAGCCCGAACACTCAGATTCT
GGCAACCGGTTCGGCAGACAACACCGTGCGACTATGGAACGTGAAGACCG
GCGAGTGCATCAAGGTGTGGGACTTCCCTACGGCCGTCAAGCGGGTCGAG
TTCACCCCCGATGGAAGCAGACTGTTGGCTGTGACGGAGAAGCGTATGGG
TTTCTTGGGTACCATTGCGGTGTTGGATATCAACTACGGCGAGAACTTGA
CGGAGCAGGCTGAGGAGCCTAGCTTGCGCATCACCTGCACAGAGAGCAAG
GCAACGGTTGCGGGCTGGAGTTACATGGGCAAGTACATCATTGCTGGTCA
CGAAGACGGCAGTGTCAGCCAGTACGATGGAAAGACCGGTGAGCAGCTGG
AGAACGTCCAGGCCCACGAGTTCGACCACCAGATCAACGACATCCAGTTC
TCCGCCGACCGCACCTACTTCATCACTGCCTCCAAGGACAAGTCCGCCAA
GCTCATGTCTACCCGTAACCTCGCCATCCTCAAAACCTATGTTGCCGACA
CTCCCCTGAACAGCGCCACCATTACGCCCAAGAAGGACTACGTGATCCTG
GGAGGTGGTCAGGCCGCCATGGATGTCACCACGACCTCGGCCCGCCAGGG
TAAGTTCGAGGCTCGTTTCTACCACAAGGTCTTCGAGGACGAGATCGGTC
GTGTCCGTGGTCATTTCGGTCCCCTCAACACGGTTCACATCCACCCCGCC
GGTACTGCCTACGCCTCTGGAGGTGAGGACGGTTACGTCCGTGTGCACCA
CTTCGACAAGCCCTACTTCGACTTCATGTACGAGGTCGAGCGCGAGCAGC
TGAGGAAGTGAATGCGGCCTATTTTGCTCTCCGGCCATGAACGGTCTCTG
AACCAAATCAAGTTCAACCGCGATGGCGATCTTATCTTCTCCGTGGCTAA
GGATAAAATTGTGTGCGCCTGGTGGTCGGCCAACGGCGAGCGACTCGGTA
CCTACAATGGACACCAGGGTGCTATCTGGACGGTCGATGTGAGCCCGAAC
ACTCAGATTCTGGCAACCGGTTCGGCAGACAACACCGTGCGACTATGGAA
CGTGAAGACCGGCGAGTGCATCAAGGTGTGGGACTTCCCTACGGCCGTCA
AGCGGGTCGAGTTCACCCCCGATGGAAGCAGACTGTTGGCTGTGACGGAG
AAGCGTATGGGTTTCTTGGGTACCATTGCGGTGTTGGATATCAACTACGG
CGAGAACTTGACGGAGCAGGCTGAGGAGCCTAGCTTGCGCATCACCTGCA
CAGAGAGCAAGGCAACGGTTGCGGGCTGGAGTTACATGGGCAAGTACATC
ATTGCTGGTCACGAAGACGGCAGTGTCAGCCAGTACGATGGAAAGACCGG
TGAGCAGCTGGAGAACGTCCAGGCCCACGAGTTCGACCACCAGATCAACG
ACATCCAGTTCTCCGCCGACCGCACCTACTTCATCACTGCCTCCAAGGAC
AAGTCCGCCAAGCTCATGTCTACCCGTAACCTCGCCATCCTCAAAACCTA
TGTTGCCGACACTCCCCTGAACAGCGCCACCATTACGCCCAAGAAGGACT
ACGTGATCCTGGGAGGTGGTCAGGCCGCCATGGATGTCACCACGACCTCG
GCCCGCCAGGGTAAGTTCGAGGCTCGTTTCTACCACAAGGTCTTCGAGGA
CGAGATCGGTCGTGTCCGTGGTCATTTCGGTCCCCTCAACACGGTTCACA
TCCACCCCGCCGGTACTGCCTACGCCTCTGGAGGTGAGGACGGTTACGTC
CGTGTGCACCACTTCGACAAGCCCTACTTCGACTTCATGTACGAGGTCGA
GCGCGAGCAGCTGAGGAAGTGAATGCGGCCTATTTTGCTCTCCGGCCATG
AACGGTCTCTGAACCAAATCAAGTTCAACCGCGATGGCGATCTTATCTTC
TCCGTGGCTAAGGATAAAATTGTGTGCGCCTGGTGGTCGGCCAACGGCGA
GCGACTCGGTACCTACAATGGACACCAGGGTGCTATCTGGACGGTCGATG
TGAGCCCGAACACTCAGATTCTGGCAACCGGTTCGGCAGACAACACCGTG
CGACTATGGAACGTGAAGACCGGCGAGTGCATCAAGGTGTGGGACTTCCC
TACGGCCGTCAAGCGGGTCGAGTTCACCCCCGATGGAAGCAGACTGTTGG
CTGTGACGGAGAAGCGTATGGGTTTCTTGGGTACCATTGCGGTGTTGGAT
ATCAACTACGGCGAGAACTTGACGGAGCAGGCTGAGGAGCCTAGCTTGCG
CATCACCTGCACAGAGAGCAAGGCAACGGTTGCGGGCTGGAGTTACATGG
GCAAGTACATCATTGCTGGTCACGAAGACGGCAGTGTCAGCCAGTACGAT
GGAAAGACCGGTGAGCAGCTGGAGAACGTCCAGGCCCACGAGTTCGACCA
CCAGATCAACGACATCCAGTTCTCCGCCGACCGCACCTACTTCATCACTG
CCTCCAAGGACAAGTCCGCCAAGCTCATGTCTACCCGTAACCTCGCCATC
CTCAAAACCTATGTTGCCGACACTCCCCTGAACAGCGCCACCATTACGCC
CAAGAAGGACTACGTGATCCTGGGAGGTGGTCAGGCCGCCATGGATGTCA
CCACGACCTCGGCCCGCCAGGGTAAGTTCGAGGCTCGTTTCTACCACAAG
GTCTTCGAGGACGAGATCGGTCGTGTCCGTGGTCATTTCGGTCCCCTCAA
CACGGTTCACATCCACCCCGCCGGTACTGCCTACGCCTCTGGAGGTGAGG
ACGGTTACGTCCGTGTGCACCACTTCGACAAGCCCTACTTCGACTTCATG
TACGAGGTCGAGCGCGAGCAGCTGAGGAAGTGAATGCGGCCTATTTTGCT
CTCCGGCCATGAACGGTCTCTGAACCAAATCAAGTTCAACCGCGATGGCG
ATCTTATCTTCTCCGTGGCTAAGGATAAAATTGTGTGCGCCTGGTGGTCG
GCCAACGGCGAGCGACTCGGTACCTACAATGGACACCAGGGTGCTATCTG
GACGGTCGATGTGAGCCCGAACACTCAGATTCTGGCAACCGGTTCGGCAG
ACAACACCGTGCGACTATGGAACGTGAAGACCGGCGAGTGCATCAAGGTG
TGGGACTTCCCTACGGCCGTCAAGCGGGTCGAGTTCACCCCCGATGGAAG
CAGACTGTTGGCTGTGACGGAGAAGCGTATGGGTTTCTTGGGTACCATTG
CGGTGTTGGATATCAACTACGGCGAGAACTTGACGGAGCAGGCTGAGGAG
CCTAGCTTGCGCATCACCTGCACAGAGAGCAAGGCAACGGTTGCGGGCTG
GAGTTACATGGGCAAGTACATCATTGCTGGTCACGAAGACGGCAGTGTCA
GCCAGTACGATGGAAAGACCGGTGAGCAGCTGGAGAACGTCCAGGCCCAC
GAGTTCGACCACCAGATCAACGACATCCAGTTCTCCGCCGACCGCACCTA
CTTCATCACTGCCTCCAAGGACAAGTCCGCCAAGCTCATGTCTACCCGTA
ACCTCGCCATCCTCAAAACCTATGTTGCCGACACTCCCCTGAACAGCGCC
ACCATTACGCCCAAGAAGGACTACGTGATCCTGGGAGGTGGTCAGGCCGC
CATGGATGTCACCACGACCTCGGCCCGCCAGGGTAAGTTCGAGGCTCGTT
TCTACCACAAGGTCTTCGAGGACGAGATCGGTCGTGTCCGTGGTCATTTC
GGTCCCCTCAACACGGTTCACATCCACCCCGCCGGTACTGCCTACGCCTC
TGGAGGTGAGGACGGTTACGTCCGTGTGCACCACTTCGACAAGCCCTACT
TCGACTTCATGTACGAGGTCGAGCGCGAGCAGCTGAGGAAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIF34KJC3_005589Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005589-T1KJC3_005589-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005589-T1.utr5p1KJC3_005589-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005589-T1.exon1KJC3_005589-T1.exon1Aspergillus niger KJC3exon
KJC3_005589-T1.exon2KJC3_005589-T1.exon2Aspergillus niger KJC3exon
KJC3_005589-T1.exon3KJC3_005589-T1.exon3Aspergillus niger KJC3exon
KJC3_005589-T1.exon4KJC3_005589-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005589-T1.cdsKJC3_005589-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005589-T1.utr3p1KJC3_005589-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09262W7C
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR027525
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producttranslation initiation factor eIF3 subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3159739..3161690 +
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