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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3300505..3301710+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005640-T1 ID=KJC3_005640-T1|Name=KJC3_005640-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1206bp|location=Sequence derived from alignment at ch4:3300505..3301710+ (Aspergillus niger KJC3)
TCTCTGGCTCACCGATCTGGTCTGTTAGCTTCTTTATCTGGATAGCGGCT
TGTGATATATGCTACTCTGAAGCTCGCGACATATACTATACTTAGCTTCA
TCAACGACTATCTACCTTATTGGACTCGCTACAGCACTTCGAGATGGATC
ACTCCATGCATGGTATGATGGACATGGACCATGGTCATGACCATGGCGAT
ATGGATATGGGTGACGGACAGTGCAGCATGAATGTGGGTGCCTTCGTTGC
TAATATATCTTGTTTCAAGTGCAAGCAGTGCGTGAAGTGGAGCTCACCAT
AACTTGTTATAACGCACTATCCTCCTAGCTCGTTGTTTATCGGTCTGGCT
AACTGCGCTTGCTAGATGCTGTTCACCTGGTCTACGAAGAACCTCTGCAT
CGTCTTTCCCCAATGGCGCATTACCAGCACCTGGTCCCTTCTGGGTTCGC
TTATTGTCATCGTCCTTTTGACAGCCGGCTACGAGGGAATTCGACAGCTC
ACAAGGCGGTTCGAAGCAGCTCATGCTAGAAGGCTGAGTGCATATACTAC
GGTTGCTGTAGGAGGTACGTACATTTCGGTTCCTATTATGATTCCTGTAT
AATGCATGGCGGGGATATTGGAGTCATGGTTTCTTCCTCATCTTCGAGCG
CTGGTTATTGGTTTGGCCCAACCTTTGCTGAGATGAAGCACCTGACACCG
TGAAGGCAGCGAGGTCCACGACGATTCTGCCACGGCCAATGTCCCTTCTA
GCCAGACGCTGCCTGCCCCGAATACCGGCTCACCCCTAGTTGTAGGCAGG
GATAGCCGAAGGACCGTCGAGCAACGAGGCAAGATCACCATGGCGGCATT
GTATGCTGTGCAGGTCTTCTATAGCTTTTTCATCATGTAAGTCTTCTAAT
CTCTCACTATTGGCCTCCTCTTCGAGTTGGACGAGTTCTAAACTGTTCAG
GCTGCTCTTCATGACGTACAACGGATTTGTCATGCTCGCAGTTGCTGTTG
GTGCCTTTGTGGGATATTTGGCGTTTGGAGACAATACATCTGCCAGCAAA
ACAGTTGCTTGTCATTAGTGGGCCGCAAGCACGAAGGCTTGCCAGGAGTA
CTGGCGGAAACTCGGCATATTCTCAGTAATAGCTTCGTTGGATAGCTGTA
GTCGTCTTGTCGTTTGTAAACAGCAGCAGTTGCATACTCGTCCAATGAAC
ATTTAT back to topCoding sequence (CDS) from alignment at ch4:3300505..3301710+ >KJC3_005640-T1 ID=KJC3_005640-T1|Name=KJC3_005640-T1|organism=Aspergillus niger KJC3|type=CDS|length=2352bp|location=Sequence derived from alignment at ch4:3300505..3301710+ (Aspergillus niger KJC3)
ATGGATCACTCCATGCATGGTATGATGGACATGGACCATGGTCATGACCA
TGGCGATATGGATATGGGTGACGGACAGTGCAGCATGAATATGCTGTTCA
CCTGGTCTACGAAGAACCTCTGCATCGTCTTTCCCCAATGGCGCATTACC
AGCACCTGGTCCCTTCTGGGTTCGCTTATTGTCATCGTCCTTTTGACAGC
CGGCTACGAGGGAATTCGACAGCTCACAAGGCGGTTCGAAGCAGCTCATG
CTAGAAGGCTGAGTGCATATACTACGGTTGCTGTAGGAGGCAGCGAGGTC
CACGACGATTCTGCCACGGCCAATGTCCCTTCTAGCCAGACGCTGCCTGC
CCCGAATACCGGCTCACCCCTAGTTGTAGGCAGGGATAGCCGAAGGACCG
TCGAGCAACGAGGCAAGATCACCATGGCGGCATTGTATGCTGTGCAGGTC
TTCTATAGCTTTTTCATCATGCTGCTCTTCATGACGTACAACGGATTTGT
CATGCTCGCAGTTGCTGTTGGTGCCTTTGTGGGATATTTGGCGTTTGGAG
ACAATACATCTGCCAGCAAAACAGTTGCTTGTCATTAGATGGATCACTCC
ATGCATGGTATGATGGACATGGACCATGGTCATGACCATGGCGATATGGA
TATGGGTGACGGACAGTGCAGCATGAATATGCTGTTCACCTGGTCTACGA
AGAACCTCTGCATCGTCTTTCCCCAATGGCGCATTACCAGCACCTGGTCC
CTTCTGGGTTCGCTTATTGTCATCGTCCTTTTGACAGCCGGCTACGAGGG
AATTCGACAGCTCACAAGGCGGTTCGAAGCAGCTCATGCTAGAAGGCTGA
GTGCATATACTACGGTTGCTGTAGGAGGCAGCGAGGTCCACGACGATTCT
GCCACGGCCAATGTCCCTTCTAGCCAGACGCTGCCTGCCCCGAATACCGG
CTCACCCCTAGTTGTAGGCAGGGATAGCCGAAGGACCGTCGAGCAACGAG
GCAAGATCACCATGGCGGCATTGTATGCTGTGCAGGTCTTCTATAGCTTT
TTCATCATGCTGCTCTTCATGACGTACAACGGATTTGTCATGCTCGCAGT
TGCTGTTGGTGCCTTTGTGGGATATTTGGCGTTTGGAGACAATACATCTG
CCAGCAAAACAGTTGCTTGTCATTAGATGGATCACTCCATGCATGGTATG
ATGGACATGGACCATGGTCATGACCATGGCGATATGGATATGGGTGACGG
ACAGTGCAGCATGAATATGCTGTTCACCTGGTCTACGAAGAACCTCTGCA
TCGTCTTTCCCCAATGGCGCATTACCAGCACCTGGTCCCTTCTGGGTTCG
CTTATTGTCATCGTCCTTTTGACAGCCGGCTACGAGGGAATTCGACAGCT
CACAAGGCGGTTCGAAGCAGCTCATGCTAGAAGGCTGAGTGCATATACTA
CGGTTGCTGTAGGAGGCAGCGAGGTCCACGACGATTCTGCCACGGCCAAT
GTCCCTTCTAGCCAGACGCTGCCTGCCCCGAATACCGGCTCACCCCTAGT
TGTAGGCAGGGATAGCCGAAGGACCGTCGAGCAACGAGGCAAGATCACCA
TGGCGGCATTGTATGCTGTGCAGGTCTTCTATAGCTTTTTCATCATGCTG
CTCTTCATGACGTACAACGGATTTGTCATGCTCGCAGTTGCTGTTGGTGC
CTTTGTGGGATATTTGGCGTTTGGAGACAATACATCTGCCAGCAAAACAG
TTGCTTGTCATTAGATGGATCACTCCATGCATGGTATGATGGACATGGAC
CATGGTCATGACCATGGCGATATGGATATGGGTGACGGACAGTGCAGCAT
GAATATGCTGTTCACCTGGTCTACGAAGAACCTCTGCATCGTCTTTCCCC
AATGGCGCATTACCAGCACCTGGTCCCTTCTGGGTTCGCTTATTGTCATC
GTCCTTTTGACAGCCGGCTACGAGGGAATTCGACAGCTCACAAGGCGGTT
CGAAGCAGCTCATGCTAGAAGGCTGAGTGCATATACTACGGTTGCTGTAG
GAGGCAGCGAGGTCCACGACGATTCTGCCACGGCCAATGTCCCTTCTAGC
CAGACGCTGCCTGCCCCGAATACCGGCTCACCCCTAGTTGTAGGCAGGGA
TAGCCGAAGGACCGTCGAGCAACGAGGCAAGATCACCATGGCGGCATTGT
ATGCTGTGCAGGTCTTCTATAGCTTTTTCATCATGCTGCTCTTCATGACG
TACAACGGATTTGTCATGCTCGCAGTTGCTGTTGGTGCCTTTGTGGGATA
TTTGGCGTTTGGAGACAATACATCTGCCAGCAAAACAGTTGCTTGTCATT
AG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005375 | copper ion transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0035434 | copper ion transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005640-T1.utr5p1 | KJC3_005640-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005640-T1.utr3p1 | KJC3_005640-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007274 |
| DBxref | PFAM:PF04145 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3300505..3301710 + |
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