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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3513762..3515147+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005717-T1 ID=KJC3_005717-T1|Name=KJC3_005717-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1386bp|location=Sequence derived from alignment at ch4:3513762..3515147+ (Aspergillus niger KJC3)
CCACGTGATGTAGCTTACTAACACCGATCATCGGCATGCGGTGATCTGGG
GAATCGCCGCGTTCCTCCCTCAGTATCCAGGCGTTCTGGGTTTGACAATT
AGCGAGCCATTGGCAGTATGTTTCGTCAAAGTATCCGCCGGTTTGGCACA
ACGGCCCTCCGCGCTGCGGAGGCGTCAACAACTTCCTACAATGTCCGGGT
GTCCAAAGCCCAAGGCTTCACCAACGGCCTTACGGAAGGTATGCACCCAT
ACTTGTCTACCCACCGGCAAATCAATCGCATAACTAACCCCCTCACCAGC
AATCGGCAACACCCCCCTCATCCGTCTGAAGAAGCTCTCCGAAGAAACCG
GCTGCAACATCCTCGGCAAAGCCGAGTTCCAGAACCCCGGAGGTAGCGTC
AAGGACCGCGCAGCTCTCTTCGTCGTTGAGGATGCGGAGAGAAAGGGACT
CCTGAAGCCCGGCGGTACGGTGGTGGAAGGCACGGCAGGAAACACCGGAA
TCGGACTCGCCCACGTCTGCCGCTCCAAGGGCTACAAGCTGGTCATCTAC
ATGCCGAACACCCAATCGCAGGGCAAGATCGACTTGTTGCGTCTCCTCGG
TGCCGAAGTCTACCCCGTCCCCGCCGTCGCATTCGACAACCCGCAGAACT
ACAACCACCAGGCTCGTCGGCACGCCGAGTCCCTGGACAATGCCGTCTGG
ACGAACCAGTTCGACAACACCGCCAACCGCCAGGCGCATATCGAGACGAC
TGGGCCGGAGATCTGGGCGCAGACGAACGGTCAGATTGACGCTTTCACTT
GTGCTACGGGTACCGGTGGTACTTTGGCTGGTATCACGCGCTACTTGAAG
ACTGTCAGTGATGGAAAGGTTAAGAGTTTCCTTGCCGATCCTCCGGGCAG
TGTGCTGCACAGCTATATCCAGAGTGGCGGGAACTTGGTTGAGCGCACCG
GTAGCAGTATCACTGAGGGTATTGGCCAGGGCCGTGTCACGGATAACCTG
CAGCCGGATATTGGTCTGCTGGACGGATCGCTTAACATCCCTGACGAGAA
GTCGATCGAGATGGTCTACCGCTGCTTGGATGAGGAGGGTCTGTACCTCG
GTGCTAGCTCCGCTTTGAATGTGGTGGCCGCGCAGGAAGTGGCGAAGAAG
CTGGGCAGGGGTAACACGGTCGTTACTATCTTGTGTGATGGTGCCTACCG
CTATGCGGACCGGCTGTTCTCCAACACGTGGCTGCAGAGTAAGGGACTGC
GTGGCGCGGTTCCGAAGCACTTGGAGCGCTATGTTGTGCTTCCTTAGATG
TAAATCAGATATCAACTTGTGAATAGATACGATGTATGCTAGAACTAGTT
CTCAGCCTGGTAGTAATAGTACTACTTCAATGGGAC back to topCoding sequence (CDS) from alignment at ch4:3513762..3515147+ >KJC3_005717-T1 ID=KJC3_005717-T1|Name=KJC3_005717-T1|organism=Aspergillus niger KJC3|type=CDS|length=2238bp|location=Sequence derived from alignment at ch4:3513762..3515147+ (Aspergillus niger KJC3)
ATGTTTCGTCAAAGTATCCGCCGGTTTGGCACAACGGCCCTCCGCGCTGC
GGAGGCGTCAACAACTTCCTACAATGTCCGGGTGTCCAAAGCCCAAGGCT
TCACCAACGGCCTTACGGAAGCAATCGGCAACACCCCCCTCATCCGTCTG
AAGAAGCTCTCCGAAGAAACCGGCTGCAACATCCTCGGCAAAGCCGAGTT
CCAGAACCCCGGAGGTAGCGTCAAGGACCGCGCAGCTCTCTTCGTCGTTG
AGGATGCGGAGAGAAAGGGACTCCTGAAGCCCGGCGGTACGGTGGTGGAA
GGCACGGCAGGAAACACCGGAATCGGACTCGCCCACGTCTGCCGCTCCAA
GGGCTACAAGCTGGTCATCTACATGCCGAACACCCAATCGCAGGGCAAGA
TCGACTTGTTGCGTCTCCTCGGTGCCGAAGTCTACCCCGTCCCCGCCGTC
GCATTCGACAACCCGCAGAACTACAACCACCAGGCTCGTCGGCACGCCGA
GTCCCTGGACAATGCCGTCTGGACGAACCAGTTCGACAACACCGCCAACC
GCCAGGCGCATATCGAGACGACTGGGCCGGAGATCTGGGCGCAGACGAAC
GGTCAGATTGACGCTTTCACTTGTGCTACGGGTACCGGTGGTACTTTGGC
TGGTATCACGCGCTACTTGAAGACTGTCAGTGATGGAAAGGTTAAGAGTT
TCCTTGCCGATCCTCCGGGCAGTGTGCTGCACAGCTATATCCAGAGTGGC
GGGAACTTGGTTGAGCGCACCGGTAGCAGTATCACTGAGGGTATTGGCCA
GGGCCGTGTCACGGATAACCTGCAGCCGGATATTGGTCTGCTGGACGGAT
CGCTTAACATCCCTGACGAGAAGTCGATCGAGATGGTCTACCGCTGCTTG
GATGAGGAGGGTCTGTACCTCGGTGCTAGCTCCGCTTTGAATGTGGTGGC
CGCGCAGGAAGTGGCGAAGAAGCTGGGCAGGGGTAACACGGTCGTTACTA
TCTTGTGTGATGGTGCCTACCGCTATGCGGACCGGCTGTTCTCCAACACG
TGGCTGCAGAGTAAGGGACTGCGTGGCGCGGTTCCGAAGCACTTGGAGCG
CTATGTTGTGCTTCCTTAGATGTTTCGTCAAAGTATCCGCCGGTTTGGCA
CAACGGCCCTCCGCGCTGCGGAGGCGTCAACAACTTCCTACAATGTCCGG
GTGTCCAAAGCCCAAGGCTTCACCAACGGCCTTACGGAAGCAATCGGCAA
CACCCCCCTCATCCGTCTGAAGAAGCTCTCCGAAGAAACCGGCTGCAACA
TCCTCGGCAAAGCCGAGTTCCAGAACCCCGGAGGTAGCGTCAAGGACCGC
GCAGCTCTCTTCGTCGTTGAGGATGCGGAGAGAAAGGGACTCCTGAAGCC
CGGCGGTACGGTGGTGGAAGGCACGGCAGGAAACACCGGAATCGGACTCG
CCCACGTCTGCCGCTCCAAGGGCTACAAGCTGGTCATCTACATGCCGAAC
ACCCAATCGCAGGGCAAGATCGACTTGTTGCGTCTCCTCGGTGCCGAAGT
CTACCCCGTCCCCGCCGTCGCATTCGACAACCCGCAGAACTACAACCACC
AGGCTCGTCGGCACGCCGAGTCCCTGGACAATGCCGTCTGGACGAACCAG
TTCGACAACACCGCCAACCGCCAGGCGCATATCGAGACGACTGGGCCGGA
GATCTGGGCGCAGACGAACGGTCAGATTGACGCTTTCACTTGTGCTACGG
GTACCGGTGGTACTTTGGCTGGTATCACGCGCTACTTGAAGACTGTCAGT
GATGGAAAGGTTAAGAGTTTCCTTGCCGATCCTCCGGGCAGTGTGCTGCA
CAGCTATATCCAGAGTGGCGGGAACTTGGTTGAGCGCACCGGTAGCAGTA
TCACTGAGGGTATTGGCCAGGGCCGTGTCACGGATAACCTGCAGCCGGAT
ATTGGTCTGCTGGACGGATCGCTTAACATCCCTGACGAGAAGTCGATCGA
GATGGTCTACCGCTGCTTGGATGAGGAGGGTCTGTACCTCGGTGCTAGCT
CCGCTTTGAATGTGGTGGCCGCGCAGGAAGTGGCGAAGAAGCTGGGCAGG
GGTAACACGGTCGTTACTATCTTGTGTGATGGTGCCTACCGCTATGCGGA
CCGGCTGTTCTCCAACACGTGGCTGCAGAGTAAGGGACTGCGTGGCGCGG
TTCCGAAGCACTTGGAGCGCTATGTTGTGCTTCCTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006535 | cysteine biosynthetic process from serine |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005717-T1.utr5p1 | KJC3_005717-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005717-T1.utr3p1 | KJC3_005717-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001216 |
| DBxref | InterPro:IPR036052 |
| DBxref | InterPro:IPR001926 |
| DBxref | PFAM:PF00291 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3513762..3515147 + |
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