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KJC3_005733-T1, KJC3_005733-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005733-T1
Unique NameKJC3_005733-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3555143..3556496-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005733-T1 ID=KJC3_005733-T1|Name=KJC3_005733-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1354bp|location=Sequence derived from alignment at ch4:3555143..3556496- (Aspergillus niger KJC3)
CCCCTCTGGAGGATACCCCCTTATCCGCTATGCTTTCGTTTGTCTTGCTT
CTTTGTGTAGCGTTGGTCAACGCCTACTCAGACCCGGGTGCATGCTCGGG
AACCTGCTGGGCACACGACCCCAATGTCATTCGCCGTGTGTCGGATGGAA
CCTACTTTCGTTTCTCGACAGGTGGTGGTGTCCATATCTCCTCTGCCAGC
GCCATCACTGGTCCCTGGACTGATCTCGGGTATGCACTGCCTAACGGATC
CATCGTTACAGTGGGAAATGCCTCCAACCTTTGGGTAAGACAGACTGACA
ACCCTGGACATCACCCTTGCCATCTGCAGTTCTGAAATTCCCGCAGGCTC
CGGACGTACACTACGTAGATGGCACATACTACATGTACTATGCTAGCTCT
ACCCTGGGCAGCCGGGATTCCACCATTGGAGTTGCAACCTCCACCACCCT
GGAAGCCGACTCCTGGACCGACCACGGCGAGATTGGTGTCACCTCGTCTT
CGTCCACCCCTTACAACGCCATTGACCCCAACTGGATCACCATTGGCAGC
ACCCCCTATCTCCAATTCGGCTCCTACTGGCAAGGTCTCTACCAGGTGGA
AATGACCGACTCCCTGAGCGCCAGCAGCAGCACGCCCACTAACTTGGCCT
ACAACGCATCGGGGAACCATGCTATCGAGGCTTCTTACCTGTACGAGTAC
GGAGGCTACTACTACCTCACCTTCTCGTCCGGCAAGGCTCAGGGGTACAC
GACCTCCCTGCCTGCCCAGGGCGATGAGTACCGCATTGTCGTTTGCCGGT
CCAAGACTGGAACGGGTAACTTTGTAAGTGCTATATGCCAATCATCAACA
TTCAAGGAATAGGGGGGGGAATGCTAATTTCGCCTGCAGGTCGACAAGGA
TGGTGTTTCATGCCTGAACAGCGGCGGAACCACCGTTCTGGCCAGCCACG
ACTATGTCTACGGCCCTGGTGGACAGTAAGTTTGCCCCTGTCTTCTTTTG
TGGCTTGACGCACATCAAACGGGGAAGCATGCTAACAATGATCAATTGCA
GGGGTATCATCAACACCACCAGCCACGGTATTGTCGTCTACTACCACTAT
GCCAACAAGAACATTGGCCTGGCTGTCGATGACTACCAGTTCGGCTGGAA
CACGCTCACCTGGACTGATGGGTGGCCTGTTGTGGCGTGATTTCATTCTT
CTTCTTCTTCTATACATACATACATTTTACCGGCGGCCCAGAAATGGGCT
CGGTAATATTTGCATGATGATACCTGCGTTCGATTGTATTTAGCTAATTA
CGTTAATTCGTAATGTTTTATATTGCGATTTAATATATACATATTGAGAC
ATAA
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Coding sequence (CDS) from alignment at ch4:3555143..3556496-

>KJC3_005733-T1 ID=KJC3_005733-T1|Name=KJC3_005733-T1|organism=Aspergillus niger KJC3|type=CDS|length=3828bp|location=Sequence derived from alignment at ch4:3555143..3556496- (Aspergillus niger KJC3)
GGGTATCATCAACACCACCAGCCACGGTATTGTCGTCTACTACCACTATG
CCAACAAGAACATTGGCCTGGCTGTCGATGACTACCAGTTCGGCTGGAAC
ACGCTCACCTGGACTGATGGGTGGCCTGTTGTGGCGTGAGTCGACAAGGA
TGGTGTTTCATGCCTGAACAGCGGCGGAACCACCGTTCTGGCCAGCCACG
ACTATGTCTACGGCCCTGGTGGACAGCTCCGGACGTACACTACGTAGATG
GCACATACTACATGTACTATGCTAGCTCTACCCTGGGCAGCCGGGATTCC
ACCATTGGAGTTGCAACCTCCACCACCCTGGAAGCCGACTCCTGGACCGA
CCACGGCGAGATTGGTGTCACCTCGTCTTCGTCCACCCCTTACAACGCCA
TTGACCCCAACTGGATCACCATTGGCAGCACCCCCTATCTCCAATTCGGC
TCCTACTGGCAAGGTCTCTACCAGGTGGAAATGACCGACTCCCTGAGCGC
CAGCAGCAGCACGCCCACTAACTTGGCCTACAACGCATCGGGGAACCATG
CTATCGAGGCTTCTTACCTGTACGAGTACGGAGGCTACTACTACCTCACC
TTCTCGTCCGGCAAGGCTCAGGGGTACACGACCTCCCTGCCTGCCCAGGG
CGATGAGTACCGCATTGTCGTTTGCCGGTCCAAGACTGGAACGGGTAACT
TTATGCTTTCGTTTGTCTTGCTTCTTTGTGTAGCGTTGGTCAACGCCTAC
TCAGACCCGGGTGCATGCTCGGGAACCTGCTGGGCACACGACCCCAATGT
CATTCGCCGTGTGTCGGATGGAACCTACTTTCGTTTCTCGACAGGTGGTG
GTGTCCATATCTCCTCTGCCAGCGCCATCACTGGTCCCTGGACTGATCTC
GGGTATGCACTGCCTAACGGATCCATCGTTACAGTGGGAAATGCCTCCAA
CCTTTGGGGGTATCATCAACACCACCAGCCACGGTATTGTCGTCTACTAC
CACTATGCCAACAAGAACATTGGCCTGGCTGTCGATGACTACCAGTTCGG
CTGGAACACGCTCACCTGGACTGATGGGTGGCCTGTTGTGGCGTGAGTCG
ACAAGGATGGTGTTTCATGCCTGAACAGCGGCGGAACCACCGTTCTGGCC
AGCCACGACTATGTCTACGGCCCTGGTGGACAGCTCCGGACGTACACTAC
GTAGATGGCACATACTACATGTACTATGCTAGCTCTACCCTGGGCAGCCG
GGATTCCACCATTGGAGTTGCAACCTCCACCACCCTGGAAGCCGACTCCT
GGACCGACCACGGCGAGATTGGTGTCACCTCGTCTTCGTCCACCCCTTAC
AACGCCATTGACCCCAACTGGATCACCATTGGCAGCACCCCCTATCTCCA
ATTCGGCTCCTACTGGCAAGGTCTCTACCAGGTGGAAATGACCGACTCCC
TGAGCGCCAGCAGCAGCACGCCCACTAACTTGGCCTACAACGCATCGGGG
AACCATGCTATCGAGGCTTCTTACCTGTACGAGTACGGAGGCTACTACTA
CCTCACCTTCTCGTCCGGCAAGGCTCAGGGGTACACGACCTCCCTGCCTG
CCCAGGGCGATGAGTACCGCATTGTCGTTTGCCGGTCCAAGACTGGAACG
GGTAACTTTATGCTTTCGTTTGTCTTGCTTCTTTGTGTAGCGTTGGTCAA
CGCCTACTCAGACCCGGGTGCATGCTCGGGAACCTGCTGGGCACACGACC
CCAATGTCATTCGCCGTGTGTCGGATGGAACCTACTTTCGTTTCTCGACA
GGTGGTGGTGTCCATATCTCCTCTGCCAGCGCCATCACTGGTCCCTGGAC
TGATCTCGGGTATGCACTGCCTAACGGATCCATCGTTACAGTGGGAAATG
CCTCCAACCTTTGGGGGTATCATCAACACCACCAGCCACGGTATTGTCGT
CTACTACCACTATGCCAACAAGAACATTGGCCTGGCTGTCGATGACTACC
AGTTCGGCTGGAACACGCTCACCTGGACTGATGGGTGGCCTGTTGTGGCG
TGAGTCGACAAGGATGGTGTTTCATGCCTGAACAGCGGCGGAACCACCGT
TCTGGCCAGCCACGACTATGTCTACGGCCCTGGTGGACAGCTCCGGACGT
ACACTACGTAGATGGCACATACTACATGTACTATGCTAGCTCTACCCTGG
GCAGCCGGGATTCCACCATTGGAGTTGCAACCTCCACCACCCTGGAAGCC
GACTCCTGGACCGACCACGGCGAGATTGGTGTCACCTCGTCTTCGTCCAC
CCCTTACAACGCCATTGACCCCAACTGGATCACCATTGGCAGCACCCCCT
ATCTCCAATTCGGCTCCTACTGGCAAGGTCTCTACCAGGTGGAAATGACC
GACTCCCTGAGCGCCAGCAGCAGCACGCCCACTAACTTGGCCTACAACGC
ATCGGGGAACCATGCTATCGAGGCTTCTTACCTGTACGAGTACGGAGGCT
ACTACTACCTCACCTTCTCGTCCGGCAAGGCTCAGGGGTACACGACCTCC
CTGCCTGCCCAGGGCGATGAGTACCGCATTGTCGTTTGCCGGTCCAAGAC
TGGAACGGGTAACTTTATGCTTTCGTTTGTCTTGCTTCTTTGTGTAGCGT
TGGTCAACGCCTACTCAGACCCGGGTGCATGCTCGGGAACCTGCTGGGCA
CACGACCCCAATGTCATTCGCCGTGTGTCGGATGGAACCTACTTTCGTTT
CTCGACAGGTGGTGGTGTCCATATCTCCTCTGCCAGCGCCATCACTGGTC
CCTGGACTGATCTCGGGTATGCACTGCCTAACGGATCCATCGTTACAGTG
GGAAATGCCTCCAACCTTTGGGGGTATCATCAACACCACCAGCCACGGTA
TTGTCGTCTACTACCACTATGCCAACAAGAACATTGGCCTGGCTGTCGAT
GACTACCAGTTCGGCTGGAACACGCTCACCTGGACTGATGGGTGGCCTGT
TGTGGCGTGAGTCGACAAGGATGGTGTTTCATGCCTGAACAGCGGCGGAA
CCACCGTTCTGGCCAGCCACGACTATGTCTACGGCCCTGGTGGACAGCTC
CGGACGTACACTACGTAGATGGCACATACTACATGTACTATGCTAGCTCT
ACCCTGGGCAGCCGGGATTCCACCATTGGAGTTGCAACCTCCACCACCCT
GGAAGCCGACTCCTGGACCGACCACGGCGAGATTGGTGTCACCTCGTCTT
CGTCCACCCCTTACAACGCCATTGACCCCAACTGGATCACCATTGGCAGC
ACCCCCTATCTCCAATTCGGCTCCTACTGGCAAGGTCTCTACCAGGTGGA
AATGACCGACTCCCTGAGCGCCAGCAGCAGCACGCCCACTAACTTGGCCT
ACAACGCATCGGGGAACCATGCTATCGAGGCTTCTTACCTGTACGAGTAC
GGAGGCTACTACTACCTCACCTTCTCGTCCGGCAAGGCTCAGGGGTACAC
GACCTCCCTGCCTGCCCAGGGCGATGAGTACCGCATTGTCGTTTGCCGGT
CCAAGACTGGAACGGGTAACTTTATGCTTTCGTTTGTCTTGCTTCTTTGT
GTAGCGTTGGTCAACGCCTACTCAGACCCGGGTGCATGCTCGGGAACCTG
CTGGGCACACGACCCCAATGTCATTCGCCGTGTGTCGGATGGAACCTACT
TTCGTTTCTCGACAGGTGGTGGTGTCCATATCTCCTCTGCCAGCGCCATC
ACTGGTCCCTGGACTGATCTCGGGTATGCACTGCCTAACGGATCCATCGT
TACAGTGGGAAATGCCTCCAACCTTTGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0046558arabinan endo-1,5-alpha-L-arabinosidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005733KJC3_005733Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005733-T1KJC3_005733-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005733-T1.cdsKJC3_005733-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005733-T1.utr3p1KJC3_005733-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005733-T1.exon4KJC3_005733-T1.exon4Aspergillus niger KJC3exon
KJC3_005733-T1.exon3KJC3_005733-T1.exon3Aspergillus niger KJC3exon
KJC3_005733-T1.exon2KJC3_005733-T1.exon2Aspergillus niger KJC3exon
KJC3_005733-T1.exon1KJC3_005733-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005733-T1.utr5p1KJC3_005733-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-15)
NoteCAZy:GH43_7
NoteCAZy:GH43_30
NoteCAZy:GH43_4
NoteCAZy:GH43_3
NoteCAZy:GH43
NoteCAZy:GH43_5
NoteCAZy:GH43_6
DBxrefInterPro:IPR023296
DBxrefInterPro:IPR006710
DBxrefInterPro:IPR016840
DBxrefPFAM:PF04616
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3555143..3556496 -
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