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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3576945..3579052+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005741-T1 ID=KJC3_005741-T1|Name=KJC3_005741-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2108bp|location=Sequence derived from alignment at ch4:3576945..3579052+ (Aspergillus niger KJC3)
ATCCACCTCTCTACTAAGTTTGGTGGGAAGCCCATTGTAACAGTTTTTGG
AGACATTTCAGTGGTTGTAGGACTTTGTTGAACCAACAAGAGGATGCTTC
CCACCCAGAATAGCTTCTGACAATGGGGATCATCAAACCCATCCCTAAAA
CGCTACACCAAACGCCCAAGTTGCCCATCCCAAGGCCTTGCTACGCTCTG
GAAGTGAGCTCCCCGTATGATCATGCTCCTTTATCAATGTTCAACTACTC
CGCATACTGCCCCTCGCGAATTCCAAGCCTCTTACGTTGTCTGCTTGCCT
GACGGGCCCTTGACAGGTTTCCGTATTGATCCCATGGAAACTTCGCCCTA
TGGACCAGCTCATTCGCCCGGGAACCATTTCATCAAAAGACCGAAGATTT
CGTCGTCTGGTCAAGGAACCCCCTGATACAAGTAGAAGACAAGTGACGTG
ATGGCCACTCCGCCAGATGTAGATAAAAGATTCAAAGGCACGCATGCTCA
ACCATCCAACTTTTCTTGGGGCCCATTTGTTGGCCCTTTTATGAAGGTAC
ATGTATAAATATCATCAGAAATGGACTCATCAAAAATTTACAGCTATTGG
GACCATACTTTTGCATGGACGCCCCTTCACCAGACGAGGGAACAGTTACG
ATCGAAGAGGCTCACCTATGACAGGCTTGGGGATGAATGTATCAAACAGC
TCAATGCTATCGGCCGTCATTTAGTTACACAAGACAGGGTAAACGATCCA
GACAGGAAGTTACCGGACCCGGACGTGTACATCCTGCTGAAGGAACACGC
AAGAGATGATCCGAAGCTTGGTGAACTCTGGGCACAAGTCAACACAGTGC
CGGATTGGGTCGATTGGCAGCAAATTAAACGGGGACAAGAGGTGTTCTTC
CGTTACGGTCTTCCCATTCTGAACGTGGTAAGTCCAGCAAACAAGAACTC
CAGGTATGAGCACTGAGAAATGCCAGCTGAACTTCGAAAGCCTCTTGGGC
GGCATGTTAGTCTCTCTGCAAAAGGTCCTCCCCCAGCTTCAGCTTATTCC
TACTTAGGGGCTCACCAAGTGTCGTTACGGCCTTGGCCAGATGTGGAGGC
TTCAACAATATATACGTTGTGCGGAAGCGACTATTGGAGACCCTACAGTT
TATCCTCCAGATCTCTGAATCTGTTGACGCAATGAAGCCAGGTGGGGTTG
GTAATATCTCATCCATCCGCGTTCGGCTGCTGCATGCATATCTTCGTACC
TTAATTTGTACTCGGGAAAGATATGACACTGGGAGATACGGAGTCCCTAT
AAACGACCTTGACAGTGCTGCAACGATTAGCAGTTTCTCATCCATCATCA
TCTGGCTCGGCCTCCCCCGGCAAGGTATCTGGCTCCGCAAGCAGGAGATA
GACGATTACTTAGCTCTCTGGAGACTGGTAGCCTACTACTTGGGAGTTCC
AGACGAGCCTTTTGCTAGCCAGCAAACCGCGCGAGCGCTGATGGAGTCTC
TCCTTGTATCGGAACTAGATCCTACCAACACTGGTAGATTCCTAGCTCGT
AACATACTCAACGGCTTGGAGAACAGAGCCCCAGCGCATGCTTCAATGGG
GTTTATGGAGGCTATGGTTCGACAACTAAATGGGAAACAACTCTCTGACG
GCCTTCATATTCCTCAGCCCAAACTGTACTATCGGGTTCTGATATACGGG
TACTGCTTCTTTGTCATGGCTTTAGCGTATGGCACCCGGTGGTTTCCGAA
GCTCGATCAAAGGTTTATCGCGGTACGTCTGTATTCTCGTGGTGTGATCC
TTAGCGCCTTGTGCACTGACTTAGACCAGTATCGTCGTCGATACTATTAC
ACCATGATAACCGACCGAGAGAAAGGGCTTGGGGGCGAGTCATTTTTTGA
CTTCGTATACAAGCCATCTTATGCAGGGCCGCTCTATAAAGCAGTGACGG
TCAAGGAGGAAGAAACAATCCCGAAAACATCGCGACGCGGCATTGAAGCA
CTAGCCCGGCTGGGTCTTGTGGCTGCATTTATTACTGCTGTGACTCTGCT
CAGTGGGAGTATTTATGTGTTTCGTATGGTCATGCGAGTATTCTTTTCAC
AAATATGA back to topCoding sequence (CDS) from alignment at ch4:3576945..3579052+ >KJC3_005741-T1 ID=KJC3_005741-T1|Name=KJC3_005741-T1|organism=Aspergillus niger KJC3|type=CDS|length=4311bp|location=Sequence derived from alignment at ch4:3576945..3579052+ (Aspergillus niger KJC3)
ATGGACTCATCAAAAATTTACAGCTATTGGGACCATACTTTTGCATGGAC
GCCCCTTCACCAGACGAGGGAACAGTTACGATCGAAGAGGCTCACCTATG
ACAGGCTTGGGGATGAATGTATCAAACAGCTCAATGCTATCGGCCGTCAT
TTAGTTACACAAGACAGGGTAAACGATCCAGACAGGAAGTTACCGGACCC
GGACGTGTACATCCTGCTGAAGGAACACGCAAGAGATGATCCGAAGCTTG
GTGAACTCTGGGCACAAGTCAACACAGTGCCGGATTGGGTCGATTGGCAG
CAAATTAAACGGGGACAAGAGGTGTTCTTCCGTTACGGTCTTCCCATTCT
GAACGTGCTGAACTTCGAAAGCCTCTTGGGCGGCATGGGCTCACCAAGTG
TCGTTACGGCCTTGGCCAGATGTGGAGGCTTCAACAATATATACGTTGTG
CGGAAGCGACTATTGGAGACCCTACAGTTTATCCTCCAGATCTCTGAATC
TGTTGACGCAATGAAGCCAGGTGGGGTTGGTAATATCTCATCCATCCGCG
TTCGGCTGCTGCATGCATATCTTCGTACCTTAATTTGTACTCGGGAAAGA
TATGACACTGGGAGATACGGAGTCCCTATAAACGACCTTGACAGTGCTGC
AACGATTAGCAGTTTCTCATCCATCATCATCTGGCTCGGCCTCCCCCGGC
AAGGTATCTGGCTCCGCAAGCAGGAGATAGACGATTACTTAGCTCTCTGG
AGACTGGTAGCCTACTACTTGGGAGTTCCAGACGAGCCTTTTGCTAGCCA
GCAAACCGCGCGAGCGCTGATGGAGTCTCTCCTTGTATCGGAACTAGATC
CTACCAACACTGGTAGATTCCTAGCTCGTAACATACTCAACGGCTTGGAG
AACAGAGCCCCAGCGCATGCTTCAATGGGGTTTATGGAGGCTATGGTTCG
ACAACTAAATGGGAAACAACTCTCTGACGGCCTTCATATTCCTCAGCCCA
AACTGTACTATCGGGTTCTGATATACGGGTACTGCTTCTTTGTCATGGCT
TTAGCGTATGGCACCCGGTGGTTTCCGAAGCTCGATCAAAGGTTTATCGC
GGTACGTCTGTATTCTCGTGGTGTGATCCTTAGCGCCTTGTGCACTGACT
TAGACCAGTATCGTCGTCGATACTATTACACCATGATAACCGACCGAGAG
AAAGGGCTTGGGGGCGAGTCATTTTTTGACTTCGTATACAAGCCATCTTA
TGCAGGGCCGCTCTATAAAGCAGTGACGGTCAAGGAGGAAGAAACAATCC
CGAAAACATCGCGACGCGGCATTGAAGCACTAGCCCGGCTGGGTCTTGTG
GCTGCATTTATTACTGCTGTGACTCTGCTCAGTGGGAGTATTTATGTGTT
TCGTATGGTCATGCGAGTATTCTTTTCACAAATATGAATGGACTCATCAA
AAATTTACAGCTATTGGGACCATACTTTTGCATGGACGCCCCTTCACCAG
ACGAGGGAACAGTTACGATCGAAGAGGCTCACCTATGACAGGCTTGGGGA
TGAATGTATCAAACAGCTCAATGCTATCGGCCGTCATTTAGTTACACAAG
ACAGGGTAAACGATCCAGACAGGAAGTTACCGGACCCGGACGTGTACATC
CTGCTGAAGGAACACGCAAGAGATGATCCGAAGCTTGGTGAACTCTGGGC
ACAAGTCAACACAGTGCCGGATTGGGTCGATTGGCAGCAAATTAAACGGG
GACAAGAGGTGTTCTTCCGTTACGGTCTTCCCATTCTGAACGTGCTGAAC
TTCGAAAGCCTCTTGGGCGGCATGGGCTCACCAAGTGTCGTTACGGCCTT
GGCCAGATGTGGAGGCTTCAACAATATATACGTTGTGCGGAAGCGACTAT
TGGAGACCCTACAGTTTATCCTCCAGATCTCTGAATCTGTTGACGCAATG
AAGCCAGGTGGGGTTGGTAATATCTCATCCATCCGCGTTCGGCTGCTGCA
TGCATATCTTCGTACCTTAATTTGTACTCGGGAAAGATATGACACTGGGA
GATACGGAGTCCCTATAAACGACCTTGACAGTGCTGCAACGATTAGCAGT
TTCTCATCCATCATCATCTGGCTCGGCCTCCCCCGGCAAGGTATCTGGCT
CCGCAAGCAGGAGATAGACGATTACTTAGCTCTCTGGAGACTGGTAGCCT
ACTACTTGGGAGTTCCAGACGAGCCTTTTGCTAGCCAGCAAACCGCGCGA
GCGCTGATGGAGTCTCTCCTTGTATCGGAACTAGATCCTACCAACACTGG
TAGATTCCTAGCTCGTAACATACTCAACGGCTTGGAGAACAGAGCCCCAG
CGCATGCTTCAATGGGGTTTATGGAGGCTATGGTTCGACAACTAAATGGG
AAACAACTCTCTGACGGCCTTCATATTCCTCAGCCCAAACTGTACTATCG
GGTTCTGATATACGGGTACTGCTTCTTTGTCATGGCTTTAGCGTATGGCA
CCCGGTGGTTTCCGAAGCTCGATCAAAGGTTTATCGCGGTACGTCTGTAT
TCTCGTGGTGTGATCCTTAGCGCCTTGTGCACTGACTTAGACCAGTATCG
TCGTCGATACTATTACACCATGATAACCGACCGAGAGAAAGGGCTTGGGG
GCGAGTCATTTTTTGACTTCGTATACAAGCCATCTTATGCAGGGCCGCTC
TATAAAGCAGTGACGGTCAAGGAGGAAGAAACAATCCCGAAAACATCGCG
ACGCGGCATTGAAGCACTAGCCCGGCTGGGTCTTGTGGCTGCATTTATTA
CTGCTGTGACTCTGCTCAGTGGGAGTATTTATGTGTTTCGTATGGTCATG
CGAGTATTCTTTTCACAAATATGAATGGACTCATCAAAAATTTACAGCTA
TTGGGACCATACTTTTGCATGGACGCCCCTTCACCAGACGAGGGAACAGT
TACGATCGAAGAGGCTCACCTATGACAGGCTTGGGGATGAATGTATCAAA
CAGCTCAATGCTATCGGCCGTCATTTAGTTACACAAGACAGGGTAAACGA
TCCAGACAGGAAGTTACCGGACCCGGACGTGTACATCCTGCTGAAGGAAC
ACGCAAGAGATGATCCGAAGCTTGGTGAACTCTGGGCACAAGTCAACACA
GTGCCGGATTGGGTCGATTGGCAGCAAATTAAACGGGGACAAGAGGTGTT
CTTCCGTTACGGTCTTCCCATTCTGAACGTGCTGAACTTCGAAAGCCTCT
TGGGCGGCATGGGCTCACCAAGTGTCGTTACGGCCTTGGCCAGATGTGGA
GGCTTCAACAATATATACGTTGTGCGGAAGCGACTATTGGAGACCCTACA
GTTTATCCTCCAGATCTCTGAATCTGTTGACGCAATGAAGCCAGGTGGGG
TTGGTAATATCTCATCCATCCGCGTTCGGCTGCTGCATGCATATCTTCGT
ACCTTAATTTGTACTCGGGAAAGATATGACACTGGGAGATACGGAGTCCC
TATAAACGACCTTGACAGTGCTGCAACGATTAGCAGTTTCTCATCCATCA
TCATCTGGCTCGGCCTCCCCCGGCAAGGTATCTGGCTCCGCAAGCAGGAG
ATAGACGATTACTTAGCTCTCTGGAGACTGGTAGCCTACTACTTGGGAGT
TCCAGACGAGCCTTTTGCTAGCCAGCAAACCGCGCGAGCGCTGATGGAGT
CTCTCCTTGTATCGGAACTAGATCCTACCAACACTGGTAGATTCCTAGCT
CGTAACATACTCAACGGCTTGGAGAACAGAGCCCCAGCGCATGCTTCAAT
GGGGTTTATGGAGGCTATGGTTCGACAACTAAATGGGAAACAACTCTCTG
ACGGCCTTCATATTCCTCAGCCCAAACTGTACTATCGGGTTCTGATATAC
GGGTACTGCTTCTTTGTCATGGCTTTAGCGTATGGCACCCGGTGGTTTCC
GAAGCTCGATCAAAGGTTTATCGCGGTACGTCTGTATTCTCGTGGTGTGA
TCCTTAGCGCCTTGTGCACTGACTTAGACCAGTATCGTCGTCGATACTAT
TACACCATGATAACCGACCGAGAGAAAGGGCTTGGGGGCGAGTCATTTTT
TGACTTCGTATACAAGCCATCTTATGCAGGGCCGCTCTATAAAGCAGTGA
CGGTCAAGGAGGAAGAAACAATCCCGAAAACATCGCGACGCGGCATTGAA
GCACTAGCCCGGCTGGGTCTTGTGGCTGCATTTATTACTGCTGTGACTCT
GCTCAGTGGGAGTATTTATGTGTTTCGTATGGTCATGCGAGTATTCTTTT
CACAAATATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005741-T1.utr5p1 | KJC3_005741-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018713 |
| DBxref | PFAM:PF09995 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3576945..3579052 + |
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