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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3684647..3686111+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005774-T1 ID=KJC3_005774-T1|Name=KJC3_005774-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1465bp|location=Sequence derived from alignment at ch4:3684647..3686111+ (Aspergillus niger KJC3)
ATGGCGCTCTCCGGTTGCTCTCGCTGGCGCCTACGACAAAGCTATCATCT
TTGCCTCTTCTATATCACAGGCTTTCTGAGTTTCTTGTGCATCATCGTCA
TCTGGTATTGCGTCAATACCGACCGCGACTATATTCACCCACTGTTGACC
CAGCTGATCCCTGCCGGACACTGCGCCTGTCAAACTTCCACCACTTTCCA
GTGCGCCAGCTGCCTGGCATGTTCGCATCCGGGCCTGGTGCAACAGCTCT
CTCCAGCTCCGGCGTGGGAATTTCAGCCTGCTCGAGACGGCAGCAATGAA
GGTCTTGATCGGGCCCAATGTACGAATGCATTCCCTGGTCTCTTCGAAGA
TGTTGTTCGCGCCACGGCCTTTTGGAAGTCTCAGGGCGCGCTGGCTATAG
AGGACTTGGACGAGATTCCTTTAGCATATGGCATGGCGCGGGCGTTCATC
CACGCTGGTGAGCTTTATGTGGTTGCTGCGCGGTCCAAAGGTGAAGACCA
TCGACGCAAGATCGTCGCCGTGTTGAGTTCAATCCACCGGGCGTTAGTCG
CCGATGCCAACCGTACCTCGCGACGAGATATCGAGTTTGTGTTCTCTGTG
GAGGATAAAGTGGAAGATGTGACCAACTCCGATCATCCTGTCTGGACTCT
GGCACGATCTGCCACGGAGGAGGCCGTCTGGCTAATGCCTGATTTCGGAT
TCTGGGCCTGGGAGAATATTCAGAACTCAATTGGGCCATACGATCAAGTT
GTTAACCGTATCAAACGCGCGGATATTCCTTGGTCGGAGAAGAAACCACA
GCTGGTCTGGCGAGGAAAGCCTAGCTTCGCCCCCAAATTGCGCCGCGCCT
TGATGGAAGCCGCGCGAGATCAGCCGTGGGGGGATGTGAAGCAGGTTGAC
TGGGACCAGAGGACGAACATAATACCCATGGAGGATCATTGTCAGTATAT
GTTCATCGCGCATGTCGAAGGTAAGCTTTTCCTCTTAAAGCTAGCGATGC
CCGACCGCATCTGTACTGACTGGGATGCGTAATGCAGGTCGCTCGTATTC
CGCGTCTTTGAAATACCGGCAAGCATGCAACTCGGTCATTGTGGCGCATA
AGCTGCAGTATATCCAGCACCACCACTACCTTCTCGTACCAGACGGGCCA
CAGCAGAATTATGTCGAAGTTGAACGGGATTTCAGCGACTTGTCGGACAA
GCTGGAGCCTCTATTGGCCGACCCCAGTCTTGCGGAGCGGATTGCCAACA
ACAGCGTGCGAACTTTCCGCGATCGGTATTTGACCAAAGCAGCAGAGGCC
TGCTACTGGCGCACGCTTTTCGAGGGGTATGGCAGCGTTTGGAACAGCAG
CGTCCCCGTGTGGTCAGAAGCGTACCAGCGCGAACGTGGCCTCCGATACG
AGTCGTTCCTCCTGATGGACAGCCAGCTGATGTTTGAGTTCGACGCGCTG
CGGTTGACTTATTGA back to topCoding sequence (CDS) from alignment at ch4:3684647..3686111+ >KJC3_005774-T1 ID=KJC3_005774-T1|Name=KJC3_005774-T1|organism=Aspergillus niger KJC3|type=CDS|length=2796bp|location=Sequence derived from alignment at ch4:3684647..3686111+ (Aspergillus niger KJC3)
ATGGCGCTCTCCGGTTGCTCTCGCTGGCGCCTACGACAAAGCTATCATCT
TTGCCTCTTCTATATCACAGGCTTTCTGAGTTTCTTGTGCATCATCGTCA
TCTGGTATTGCGTCAATACCGACCGCGACTATATTCACCCACTGTTGACC
CAGCTGATCCCTGCCGGACACTGCGCCTGTCAAACTTCCACCACTTTCCA
GTGCGCCAGCTGCCTGGCATGTTCGCATCCGGGCCTGGTGCAACAGCTCT
CTCCAGCTCCGGCGTGGGAATTTCAGCCTGCTCGAGACGGCAGCAATGAA
GGTCTTGATCGGGCCCAATGTACGAATGCATTCCCTGGTCTCTTCGAAGA
TGTTGTTCGCGCCACGGCCTTTTGGAAGTCTCAGGGCGCGCTGGCTATAG
AGGACTTGGACGAGATTCCTTTAGCATATGGCATGGCGCGGGCGTTCATC
CACGCTGGTGAGCTTTATGTGGTTGCTGCGCGGTCCAAAGGTGAAGACCA
TCGACGCAAGATCGTCGCCGTGTTGAGTTCAATCCACCGGGCGTTAGTCG
CCGATGCCAACCGTACCTCGCGACGAGATATCGAGTTTGTGTTCTCTGTG
GAGGATAAAGTGGAAGATGTGACCAACTCCGATCATCCTGTCTGGACTCT
GGCACGATCTGCCACGGAGGAGGCCGTCTGGCTAATGCCTGATTTCGGAT
TCTGGGCCTGGGAGAATATTCAGAACTCAATTGGGCCATACGATCAAGTT
GTTAACCGTATCAAACGCGCGGATATTCCTTGGTCGGAGAAGAAACCACA
GCTGGTCTGGCGAGGAAAGCCTAGCTTCGCCCCCAAATTGCGCCGCGCCT
TGATGGAAGCCGCGCGAGATCAGCCGTGGGGGGATGTGAAGCAGGTTGAC
TGGGACCAGAGGACGAACATAATACCCATGGAGGATCATTGTCAGTATAT
GTTCATCGCGCATGTCGAAGGTCGCTCGTATTCCGCGTCTTTGAAATACC
GGCAAGCATGCAACTCGGTCATTGTGGCGCATAAGCTGCAGTATATCCAG
CACCACCACTACCTTCTCGTACCAGACGGGCCACAGCAGAATTATGTCGA
AGTTGAACGGGATTTCAGCGACTTGTCGGACAAGCTGGAGCCTCTATTGG
CCGACCCCAGTCTTGCGGAGCGGATTGCCAACAACAGCGTGCGAACTTTC
CGCGATCGGTATTTGACCAAAGCAGCAGAGGCCTGCTACTGGCGCACGCT
TTTCGAGGGGTATGGCAGCGTTTGGAACAGCAGCGTCCCCGTGTGGTCAG
AAGCGTACCAGCGCGAACGTGGCCTCCGATACGAGTCGTTCCTCCTGATG
GACAGCCAGCTGATGTTTGAGTTCGACGCGCTGCGGTTGACTTATTGAAT
GGCGCTCTCCGGTTGCTCTCGCTGGCGCCTACGACAAAGCTATCATCTTT
GCCTCTTCTATATCACAGGCTTTCTGAGTTTCTTGTGCATCATCGTCATC
TGGTATTGCGTCAATACCGACCGCGACTATATTCACCCACTGTTGACCCA
GCTGATCCCTGCCGGACACTGCGCCTGTCAAACTTCCACCACTTTCCAGT
GCGCCAGCTGCCTGGCATGTTCGCATCCGGGCCTGGTGCAACAGCTCTCT
CCAGCTCCGGCGTGGGAATTTCAGCCTGCTCGAGACGGCAGCAATGAAGG
TCTTGATCGGGCCCAATGTACGAATGCATTCCCTGGTCTCTTCGAAGATG
TTGTTCGCGCCACGGCCTTTTGGAAGTCTCAGGGCGCGCTGGCTATAGAG
GACTTGGACGAGATTCCTTTAGCATATGGCATGGCGCGGGCGTTCATCCA
CGCTGGTGAGCTTTATGTGGTTGCTGCGCGGTCCAAAGGTGAAGACCATC
GACGCAAGATCGTCGCCGTGTTGAGTTCAATCCACCGGGCGTTAGTCGCC
GATGCCAACCGTACCTCGCGACGAGATATCGAGTTTGTGTTCTCTGTGGA
GGATAAAGTGGAAGATGTGACCAACTCCGATCATCCTGTCTGGACTCTGG
CACGATCTGCCACGGAGGAGGCCGTCTGGCTAATGCCTGATTTCGGATTC
TGGGCCTGGGAGAATATTCAGAACTCAATTGGGCCATACGATCAAGTTGT
TAACCGTATCAAACGCGCGGATATTCCTTGGTCGGAGAAGAAACCACAGC
TGGTCTGGCGAGGAAAGCCTAGCTTCGCCCCCAAATTGCGCCGCGCCTTG
ATGGAAGCCGCGCGAGATCAGCCGTGGGGGGATGTGAAGCAGGTTGACTG
GGACCAGAGGACGAACATAATACCCATGGAGGATCATTGTCAGTATATGT
TCATCGCGCATGTCGAAGGTCGCTCGTATTCCGCGTCTTTGAAATACCGG
CAAGCATGCAACTCGGTCATTGTGGCGCATAAGCTGCAGTATATCCAGCA
CCACCACTACCTTCTCGTACCAGACGGGCCACAGCAGAATTATGTCGAAG
TTGAACGGGATTTCAGCGACTTGTCGGACAAGCTGGAGCCTCTATTGGCC
GACCCCAGTCTTGCGGAGCGGATTGCCAACAACAGCGTGCGAACTTTCCG
CGATCGGTATTTGACCAAAGCAGCAGAGGCCTGCTACTGGCGCACGCTTT
TCGAGGGGTATGGCAGCGTTTGGAACAGCAGCGTCCCCGTGTGGTCAGAA
GCGTACCAGCGCGAACGTGGCCTCCGATACGAGTCGTTCCTCCTGATGGA
CAGCCAGCTGATGTTTGAGTTCGACGCGCTGCGGTTGACTTATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GT90 |
| DBxref | InterPro:IPR006598 |
| DBxref | PFAM:PF05686 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3684647..3686111 + |
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