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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3961651..3965816- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005861-T2 ID=KJC3_005861-T2|Name=KJC3_005861-T2|organism=Aspergillus niger KJC3|type=mRNA|length=4166bp|location=Sequence derived from alignment at ch4:3961651..3965816- (Aspergillus niger KJC3)
CTCAGATGTATACAACTTGGGGAAGTGAGGAGTAGCCTGCTGGCTCGCCA
AACTTAGTCATAAGGAGACTATATCGCTCCGAGGTCTTGAAAACTACATT
CAAGTGGTTGTTAGCCTCTCGGATGGTCTAATATTGTACAAAGTTGAAGT
AATCATGAATCAATCGGCCTCTGCATCAGGCCGTGGCACATGACAGGCAC
TGGCTGTGCTTTTTCCTACTGTTATCATCCTCCGGGATCTCCCACCTCCC
CCTCAGATGTCCTTTTTCTTTCCTCTGGCCAATATCGTGTGCTCCAGTTG
ATACTCACCGTATATTTGTCTGTATGAGTGCGTGCCTTCAAAGCTCGCCT
AGTGCTGCGTGTTTTCCCATCATATCTCACTCCCTACTTCTTACCCCGCC
AACATGGATACGAGTGGCGTCCCCAACGCCCCGAATACGGGGACCTCACG
TACTTTCAAGGTGAGCAATGACCCGGTGTGAGCTGTGCCGACATCATTAT
CAGCCTGGACATCCTAATGATTACTAGTTTGATCTCGATGACACTTGTTG
CTTGAAATCAAATCCATCTTTAACAGGTATTGTTGTAGTATGGCTCCCGT
TGATAGCATTAGTGAATCTCGCTTCGCTAACATACACGGCTAGAGAACAT
ATCTTGATGTACGTTTTCCTACGACCGATAAATCCAAGAACGATGACTCA
AATAGACTGACATGGCAATCCCAGGTGAATCCATCTGGGCCGCCAGAAGA
TTACTTGGTGGTATCCTATACCTCGGTGCCACAAGACGTTCTGACCGATT
TCTTACAAACCGGTGTGGTAAGTGATCAGGTCCCATTAGCCAGAAATAAT
GTTCACTAAACTCCCTTTCTCCTGTATAGCCGCGCAAAGGATATGTTTTT
GTTGAGTTTGACTGGTTTTCGCAAGGATATTCTCTCATTCATGAGGACGA
CCTTGAACTACTTGACAGGTACATCGACTTCGGTAGTCATGTCAAAAGGA
ATTCGGACGACACATTATATGGCACGGTCATCAATGCATCTGCTACATGC
ACCCTCGAGCCAATTGCGTATCGTAACTATGACGACTCTTTAGGCGAATA
TGGCTCCGTCGAGTTCAACGAACGGCTCATGCCTCGCAGCCGCACAAGAC
CCGAGGCCGGATCCTCTCGTCCTCTGCCACTGCATAATGTACCTTTATCT
GAGCTCATGCACCACCAGCAGTTCAGAGAAGATGACTTGATTATTTATCG
CCAGAAACTGGGAGTCATCCGGCAAGTTGATCGTGATGCTATTCTGCGCG
TTTCCAACGTGCCGGTCTCGCTTGTCGATCCCAATGCTCTGGAGGTTCCT
TGCATCTTCGATGACAAAGAACTTATATGGATGCCTACGGGCCAGCCGTG
TAGAATTGTCGATGCCAATTTACAATACCTGGAGCATGACTTCGTGATTC
CGGGTCAGTATGTGTGTACGAAATACAAAAATATGCGCGGGATAAACGGG
GGCGTAGTCCCAAAGGAAGATATCTGTTCTTTTGGCCATGGCCAGGTCCT
GTCCACGCCAGCTACGGAGTATAAAGTTGAATGGCTCTGTACGAATGTGT
TCGGCCTTGGAACACTTGAGATCTCGGATAAAATAGAAACTCTCAGAGCA
CCTGTCTTGGAACGCGATGCCGTGAAATGCGATTTTGGAAACCTCCCAAC
TGAGGGAACAGTAAAATCTGATGTTTGTCTTCACATCGGTGAGATGGTAC
GTTTTCGAGATCCGAAAAGTGCTTTTCAGAAATATCTTTACCAACATATT
CCTCTCGGAGAGACCTTTGGTTACGATATGAACATCTTCCAAATTACGTC
AAAAAAGACGGCACTGACTGTCAAGTGGTCGGACGGGAGTGTCACAACCG
AAGATATTAAGTCTCTTTGTGTGAGTACCGGAATTGATGAAAACATTTGG
CCTGGGAGTATTGTCGTCCTAAAGGATGGGATTGAGATCATCGATCTGCC
CGCATCAGAACGCATACCTGCATATATCAAACAGCTGCCTAAGCATAGGA
GACACGGGGGATCAACAATCCGAGCGAGAATTGTGGGTATCGTCCAGGCT
GTTGACATCCGGGAGCAAATAGCTACCGTTCAGTGGTATAAAGATCCCGA
TGTCGTACTTTTGCATGGTGGGCAAATCCTAGCCTACCCCTACTCCTCTC
TGGGCGAGCTGAGTGATACAGTCAGCCAAGTATCTCTATATGAGCTTGAC
GTGTTTCCTTGTCTGGAGAGATTACATGGTGACATCGTTCTTCTCGCCCC
AGACACCATCCATGAATCGGCTTTGATGAAAGGAAAATTAAATACATATA
ATGTCGCCGGTCCTTGCACCTATAGCTACACGTCGTCGTTGTCACTTTCG
CAGGTACATGCATACCTCGACGCTATGAGTATTTCGATGTTGGACGCGGA
ATGGTTCAAAAGTACGACTACAATTGACACTACCCCTCTTCCTCCAAGAC
ATAGTTACCACTACCAGCGTAAGCTCAATAAAAAGCCCACTGCAGATTTC
GTCGGACAGATTATTGCGATTGAGACCAATGGAGATATCACTGTTCGGTT
GGCTGCTACGGGTGCTTGTCGCGACATCCGCGTCCCATTTGAAAAGATTA
TGATGGTCATTAACGTAGGATTTTCCAGCTCAGCCGGGATCCCAGCTCCA
GGTGATTTATCGACCATGTCAATGAACACGACATATGAGGATGAAGAAGG
GAGTTCAATTGGCGACGAGGATGAGTGGGAGACAGACGAGCCTGACGAAA
TCCCAGACACTAATACTGCAAATGACTATATTGTTCCCGAATCTACAGAG
GCCGATTGTTTCACGGAGGCAGACATTGACACGGGGAATGGTGACTCTCG
CCTTGAAATGAGAGAGAATTCGGATGATGTAGCTGAGCAGAGCGAGGAAA
TGACTTTACCTCCAGAGTTCCTCATATTGGAAGGCATCCCTCCCTCCGAT
CACCATTTCATCTCGAAACACGAGGCCAGGGGCTCGGTCTTACGCACCAG
GTGTATTCAGAAGGAACTTGACATACTCAGTGAATCTCTTCCTCCCGGAA
TCTTTGTGCGAGCATGGGAATCAAGGATGGACCTTCTCAGGGTTTTGTTC
ATTGGGCCAGAGGGGACCCCGTACGAATATGCACCGATTGTGCTAGACCT
GCACTTGCCTGGGGACTTTCCTAAAAAGCCTCCCGAAGCATTCTTTCACT
CGTGGATTAGTGGTCAAGGAAGGATCAATCCGAACCTCTATGAAGATGGT
AAAATCTGCCTGAGCATTTTAGGGACATGGCCCACTCAAAATCCGGAGGA
AACATGGTCAGCAACCAAGTCCACTGTTCTACAGGTCTTAGTCTCGATTA
TGGGGCTGGTCTTGGTGAAAGCCCCTTTCTATAGTAAGTCAGCATTATGG
GCAATGTGTATAACTCCGGTATCAAAGGCTGACTGTTTACCAGATGAGGC
CGGTTATGAAGCCCTTGCCGCGGAGGGCGACCGGCAAGTCGAGTCAAACA
AGTACACCGAAAGGACGTTCTTGACTACACGCAGATATATCAAATATGCC
CTCGATCACCCAGTGAGCGGCATGGAGGACATTGTGACCTGGAATTATCT
GCCCAGTCGCGTAAGGTCAATTGATTGCGACAGGCCCCTACTGCTCCGTC
GCGCTATCGATGCGGCATTGGCGATGATAGATCATTACGATAATTCTAGC
ACTGGAGAGGAGCGCAGGGCCTCAGCCTTTGTCTCGCGTCTTAGCCTTGG
GGCCGTGGTTATGCTACGAAAGTATATCACGGAGCTTGAGGTTTTGGAAG
TAGCCGCGACTGTCTAACAATAACCTTGATGTTGGATGGATCTGTTGCAA
ATAATTATCAGACCCTGATCTTGTTATTGATTGATCATAAGAGACCATCC
ACTTTTGTTAATGATATCTACGATGCATTGGCTTATCTTGCGGAATGGAA
TTTTGGGCAGTGGATGAGTGAGAGACGTTGTAATAGTTGGGTGAGAGTCA
CTCGGATCTATGCTACAAATATGCACTGCTTTATAATTGTTTGAAGTTTT
GATAATGAGTAGTATCTCTGAATGGTTGCTGATGCAGTAGAACAGTATCC
TGGACTGGAACTCCGC back to topCoding sequence (CDS) from alignment at ch4:3961651..3965816- >KJC3_005861-T2 ID=KJC3_005861-T2|Name=KJC3_005861-T2|organism=Aspergillus niger KJC3|type=CDS|length=5358bp|location=Sequence derived from alignment at ch4:3961651..3965816- (Aspergillus niger KJC3)
ATGAGGCCGGTTATGAAGCCCTTGCCGCGGAGGGCGACCGGCAAGTCGAG
TCAAACAAGTACACCGAAAGGACGTTCTTGACTACACGCAGATATATCAA
ATATGCCCTCGATCACCCAGTGAGCGGCATGGAGGACATTGTGACCTGGA
ATTATCTGCCCAGTCGCGTAAGGTCAATTGATTGCGACAGGCCCCTACTG
CTCCGTCGCGCTATCGATGCGGCATTGGCGATGATAGATCATTACGATAA
TTCTAGCACTGGAGAGGAGCGCAGGGCCTCAGCCTTTGTCTCGCGTCTTA
GCCTTGGGGCCGTGGTTATGCTACGAAAGTATATCACGGAGCTTGAGGTT
TTGGAAGTAGCCGCGACTGTCTAAATGCCTCGCAGCCGCACAAGACCCGA
GGCCGGATCCTCTCGTCCTCTGCCACTGCATAATGTACCTTTATCTGAGC
TCATGCACCACCAGCAGTTCAGAGAAGATGACTTGATTATTTATCGCCAG
AAACTGGGAGTCATCCGGCAAGTTGATCGTGATGCTATTCTGCGCGTTTC
CAACGTGCCGGTCTCGCTTGTCGATCCCAATGCTCTGGAGGTTCCTTGCA
TCTTCGATGACAAAGAACTTATATGGATGCCTACGGGCCAGCCGTGTAGA
ATTGTCGATGCCAATTTACAATACCTGGAGCATGACTTCGTGATTCCGGG
TCAGTATGTGTGTACGAAATACAAAAATATGCGCGGGATAAACGGGGGCG
TAGTCCCAAAGGAAGATATCTGTTCTTTTGGCCATGGCCAGGTCCTGTCC
ACGCCAGCTACGGAGTATAAAGTTGAATGGCTCTGTACGAATGTGTTCGG
CCTTGGAACACTTGAGATCTCGGATAAAATAGAAACTCTCAGAGCACCTG
TCTTGGAACGCGATGCCGTGAAATGCGATTTTGGAAACCTCCCAACTGAG
GGAACAGTAAAATCTGATGTTTGTCTTCACATCGGTGAGATGGTACGTTT
TCGAGATCCGAAAAGTGCTTTTCAGAAATATCTTTACCAACATATTCCTC
TCGGAGAGACCTTTGGTTACGATATGAACATCTTCCAAATTACGTCAAAA
AAGACGGCACTGACTGTCAAGTGGTCGGACGGGAGTGTCACAACCGAAGA
TATTAAGTCTCTTTGTGTGAGTACCGGAATTGATGAAAACATTTGGCCTG
GGAGTATTGTCGTCCTAAAGGATGGGATTGAGATCATCGATCTGCCCGCA
TCAGAACGCATACCTGCATATATCAAACAGCTGCCTAAGCATAGGAGACA
CGGGGGATCAACAATCCGAGCGAGAATTGTGGGTATCGTCCAGGCTGTTG
ACATCCGGGAGCAAATAGCTACCGTTCAGTGGTATAAAGATCCCGATGTC
GTACTTTTGCATGGTGGGCAAATCCTAGCCTACCCCTACTCCTCTCTGGG
CGAGCTGAGTGATACAGTCAGCCAAGTATCTCTATATGAGCTTGACGTGT
TTCCTTGTCTGGAGAGATTACATGGTGACATCGTTCTTCTCGCCCCAGAC
ACCATCCATGAATCGGCTTTGATGAAAGGAAAATTAAATACATATAATGT
CGCCGGTCCTTGCACCTATAGCTACACGTCGTCGTTGTCACTTTCGCAGG
TACATGCATACCTCGACGCTATGAGTATTTCGATGTTGGACGCGGAATGG
TTCAAAAGTACGACTACAATTGACACTACCCCTCTTCCTCCAAGACATAG
TTACCACTACCAGCGTAAGCTCAATAAAAAGCCCACTGCAGATTTCGTCG
GACAGATTATTGCGATTGAGACCAATGGAGATATCACTGTTCGGTTGGCT
GCTACGGGTGCTTGTCGCGACATCCGCGTCCCATTTGAAAAGATTATGAT
GGTCATTAACGTAGGATTTTCCAGCTCAGCCGGGATCCCAGCTCCAGGTG
ATTTATCGACCATGTCAATGAACACGACATATGAGGATGAAGAAGGGAGT
TCAATTGGCGACGAGGATGAGTGGGAGACAGACGAGCCTGACGAAATCCC
AGACACTAATACTGCAAATGACTATATTGTTCCCGAATCTACAGAGGCCG
ATTGTTTCACGGAGGCAGACATTGACACGGGGAATGGTGACTCTCGCCTT
GAAATGAGAGAGAATTCGGATGATGTAGCTGAGCAGAGCGAGGAAATGAC
TTTACCTCCAGAGTTCCTCATATTGGAAGGCATCCCTCCCTCCGATCACC
ATTTCATCTCGAAACACGAGGCCAGGGGCTCGGTCTTACGCACCAGGTGT
ATTCAGAAGGAACTTGACATACTCAGTGAATCTCTTCCTCCCGGAATCTT
TGTGCGAGCATGGGAATCAAGGATGGACCTTCTCAGGGTTTTGTTCATTG
GGCCAGAGGGGACCCCGTACGAATATGCACCGATTGTGCTAGACCTGCAC
TTGCCTGGGGACTTTCCTAAAAAGCCTCCCGAAGCATTCTTTCACTCGTG
GATTAGTGGTCAAGGAAGGATCAATCCGAACCTCTATGAAGATGGTAAAA
TCTGCCTGAGCATTTTAGGGACATGGCCCACTCAAAATCCGGAGGAAACA
TGGTCAGCAACCAAGTCCACTGTTCTACAGGTCTTAGTCTCGATTATGGG
GCTGGTCTTGGTGAAAGCCCCTTTCTATAATGAGGCCGGTTATGAAGCCC
TTGCCGCGGAGGGCGACCGGCAAGTCGAGTCAAACAAGTACACCGAAAGG
ACGTTCTTGACTACACGCAGATATATCAAATATGCCCTCGATCACCCAGT
GAGCGGCATGGAGGACATTGTGACCTGGAATTATCTGCCCAGTCGCGTAA
GGTCAATTGATTGCGACAGGCCCCTACTGCTCCGTCGCGCTATCGATGCG
GCATTGGCGATGATAGATCATTACGATAATTCTAGCACTGGAGAGGAGCG
CAGGGCCTCAGCCTTTGTCTCGCGTCTTAGCCTTGGGGCCGTGGTTATGC
TACGAAAGTATATCACGGAGCTTGAGGTTTTGGAAGTAGCCGCGACTGTC
TAAATGCCTCGCAGCCGCACAAGACCCGAGGCCGGATCCTCTCGTCCTCT
GCCACTGCATAATGTACCTTTATCTGAGCTCATGCACCACCAGCAGTTCA
GAGAAGATGACTTGATTATTTATCGCCAGAAACTGGGAGTCATCCGGCAA
GTTGATCGTGATGCTATTCTGCGCGTTTCCAACGTGCCGGTCTCGCTTGT
CGATCCCAATGCTCTGGAGGTTCCTTGCATCTTCGATGACAAAGAACTTA
TATGGATGCCTACGGGCCAGCCGTGTAGAATTGTCGATGCCAATTTACAA
TACCTGGAGCATGACTTCGTGATTCCGGGTCAGTATGTGTGTACGAAATA
CAAAAATATGCGCGGGATAAACGGGGGCGTAGTCCCAAAGGAAGATATCT
GTTCTTTTGGCCATGGCCAGGTCCTGTCCACGCCAGCTACGGAGTATAAA
GTTGAATGGCTCTGTACGAATGTGTTCGGCCTTGGAACACTTGAGATCTC
GGATAAAATAGAAACTCTCAGAGCACCTGTCTTGGAACGCGATGCCGTGA
AATGCGATTTTGGAAACCTCCCAACTGAGGGAACAGTAAAATCTGATGTT
TGTCTTCACATCGGTGAGATGGTACGTTTTCGAGATCCGAAAAGTGCTTT
TCAGAAATATCTTTACCAACATATTCCTCTCGGAGAGACCTTTGGTTACG
ATATGAACATCTTCCAAATTACGTCAAAAAAGACGGCACTGACTGTCAAG
TGGTCGGACGGGAGTGTCACAACCGAAGATATTAAGTCTCTTTGTGTGAG
TACCGGAATTGATGAAAACATTTGGCCTGGGAGTATTGTCGTCCTAAAGG
ATGGGATTGAGATCATCGATCTGCCCGCATCAGAACGCATACCTGCATAT
ATCAAACAGCTGCCTAAGCATAGGAGACACGGGGGATCAACAATCCGAGC
GAGAATTGTGGGTATCGTCCAGGCTGTTGACATCCGGGAGCAAATAGCTA
CCGTTCAGTGGTATAAAGATCCCGATGTCGTACTTTTGCATGGTGGGCAA
ATCCTAGCCTACCCCTACTCCTCTCTGGGCGAGCTGAGTGATACAGTCAG
CCAAGTATCTCTATATGAGCTTGACGTGTTTCCTTGTCTGGAGAGATTAC
ATGGTGACATCGTTCTTCTCGCCCCAGACACCATCCATGAATCGGCTTTG
ATGAAAGGAAAATTAAATACATATAATGTCGCCGGTCCTTGCACCTATAG
CTACACGTCGTCGTTGTCACTTTCGCAGGTACATGCATACCTCGACGCTA
TGAGTATTTCGATGTTGGACGCGGAATGGTTCAAAAGTACGACTACAATT
GACACTACCCCTCTTCCTCCAAGACATAGTTACCACTACCAGCGTAAGCT
CAATAAAAAGCCCACTGCAGATTTCGTCGGACAGATTATTGCGATTGAGA
CCAATGGAGATATCACTGTTCGGTTGGCTGCTACGGGTGCTTGTCGCGAC
ATCCGCGTCCCATTTGAAAAGATTATGATGGTCATTAACGTAGGATTTTC
CAGCTCAGCCGGGATCCCAGCTCCAGGTGATTTATCGACCATGTCAATGA
ACACGACATATGAGGATGAAGAAGGGAGTTCAATTGGCGACGAGGATGAG
TGGGAGACAGACGAGCCTGACGAAATCCCAGACACTAATACTGCAAATGA
CTATATTGTTCCCGAATCTACAGAGGCCGATTGTTTCACGGAGGCAGACA
TTGACACGGGGAATGGTGACTCTCGCCTTGAAATGAGAGAGAATTCGGAT
GATGTAGCTGAGCAGAGCGAGGAAATGACTTTACCTCCAGAGTTCCTCAT
ATTGGAAGGCATCCCTCCCTCCGATCACCATTTCATCTCGAAACACGAGG
CCAGGGGCTCGGTCTTACGCACCAGGTGTATTCAGAAGGAACTTGACATA
CTCAGTGAATCTCTTCCTCCCGGAATCTTTGTGCGAGCATGGGAATCAAG
GATGGACCTTCTCAGGGTTTTGTTCATTGGGCCAGAGGGGACCCCGTACG
AATATGCACCGATTGTGCTAGACCTGCACTTGCCTGGGGACTTTCCTAAA
AAGCCTCCCGAAGCATTCTTTCACTCGTGGATTAGTGGTCAAGGAAGGAT
CAATCCGAACCTCTATGAAGATGGTAAAATCTGCCTGAGCATTTTAGGGA
CATGGCCCACTCAAAATCCGGAGGAAACATGGTCAGCAACCAAGTCCACT
GTTCTACAGGTCTTAGTCTCGATTATGGGGCTGGTCTTGGTGAAAGCCCC
TTTCTATA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005861-T2.utr3p1 | KJC3_005861-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016135 |
| DBxref | InterPro:IPR000608 |
| DBxref | PFAM:PF00179 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3961651..3965816 - |
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