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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4008899..4011430- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005879-T2 ID=KJC3_005879-T2|Name=KJC3_005879-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2532bp|location=Sequence derived from alignment at ch4:4008899..4011430- (Aspergillus niger KJC3)
CCCTCGCGCTATTGTTCCGTCAACAAGCACCCTCTTAAAATGCACAACAT
TTGGCAAAGGTCCTCCTCCACAAGAAGGAGACGATCCAGAGATCGACAAG
GCCTCTTTAACCGCTTTTCCTGGGATGAACGAGCGATTCATGGAAGGGCG
CACGACGCCCTCGTTGTTCCTGAAAAGAATGTCCATTCATCCCGTGCGGA
GCCTGTACACTCTGGAGAAGCAATTGTCGTTCGTAATACTGCAGCTCATA
ACAACGACACTAAGATTTCTTCACTAGGCACACTCTCCAGAATACTGTCG
GTATCACAGGATGGGCCACGAAACGATGGGTCTACCATCTGGACTCCCTC
ATCGACAAAAGATAAGACCATTCATTATGAGATGGACATCGTGGAGGATG
TGGGAAGCCTGTTGGAGGAATTCTCGCGACTCAAGAGACTAGGCCATTTC
CAGGAAGCGGAACAATACTTTCAAGATTCCTTGAGTGCGTTTATGGAACT
ATCACCAGTTACAATTGAGTTCGCAGACATGCTAGTCGAACAAGGTTCGT
ACGAGCGTTTGCATCGCGTTCTGTCGCAGCACCAACAGCAGGAGCTAGAT
ACATTTGACAGTATCTCAAGCCTGCCGGAGAACAACCGTGCCAGATTTCT
ATATCAAGCGAACTTGCACCTCATACAGCAATTCGCGGCCATGCAGTCCC
ACGGGTCGCTGGACGAGGCATATGTAACAGTCCGATCCTTGGAGCGCCAA
ATGCGTGTCCTAAGGCGACGTTGGAGGAGGGACTCGACTCTTGATCTGGA
CTCGGCTGAAGTAAGTCCGATTTAATGGGATACTCAAGCGACTGGCAAAG
ACTAATAGTACAGGCAGGTGCAAGTGATCCGTTATGCGCTATTGATTCTA
TCGCAGGTTGAGCGTGAAACAAATTTGATTGCAGAGCATGAGTTCAATTT
CTGGTCTAACTGGCACTATCTGTACAGCGCTCTCGTGACTGAAGGGCGAG
TATGGGATGCGCGAGATCTAATACTCGCTTCCATTCAGACGGAAGGTCCA
GCAAATTCGTGGAACTTGATCTTCGAAGTAGAACTTGATTCTCCCAAGGA
TGCGTTTCGCAAACTCATTGGCGACTGGGGCTTGCATCGGTACGATGAGT
CAACATATCTCGCCATTCTAGATATTCTAGTGTGTCTGAGCCGCGGTTTG
TCCTCATGGTCTATCTCGTTACCAGAGAGACAGGACTTGCTCACTGCTCA
ACGATGCCTCCAGTATGGGCAAGCCCTTGCAACCTGCCTCAAGGAGAACA
ACCCGCAGCTGGTAAAATCTCGTCCTTACCTACAGTGGGTTATTGCTGAA
GCGGAACTGGAGAGGAAGCTTCAACCCAACACCTCAGGTTTAGATCTGCG
AGACCACCTTAGCAAATTTCCAGGCCTGACCATCTGGAGGGGCGCTGTTC
CTATTTATCTTCCTATCAAAATGGAGAACCCGAAGTGGACGGTGCCTAGA
GACGGTGGACGGAGCTATGATCTTCTTGAAACCGTCCTTCAAGCGGCACA
AGACCTGAAGGACTACAGGACAGAGGCCTTATGCTTGGGTGAGCTAATCT
ATCGTTCAGTAAACACGAGCGAAAGATTGACTCGGTTATCCCATCTCCAG
AAGTCCATTCAGGGGGATATTGTCGGCTATCGACAGACGTCCCTGTCGTG
GTTCCTTCTTGCTGACACTGAACAAGACTACAAGCTTCTTCTAGACAGCT
TGAAAAACATACAGGAACCGAAACGATCCCTAGGATTTCTCTATTCTCTG
AGTGACTGGTGTGCAATTGTTATCGAACGAGCTATTTCACACTGCCTGGC
GGAGGATGTATCGTCTTCTGAAGAAGCTTTCCAAAACACCAAGGAGGGCT
TCTCTATCTACCTCCCGCAATACATAAAAGACCAGTTAGAGGCGCTCGGT
CTGAATAAGGTATACTTCGCAGTCTCAAGGGTCGGAAAGCCCCAGGCACC
TGACATACGACATCGCAATATCACAGACGTTCCGACAATGGAACAGTATA
CTCGACCCCACGATTCTTTTGAGAGTTTGGGTGACGAGAGACATGGGCAG
TCTGAGCCACTGCTCTCCTTTCAGAGACGACCAGAGCGCACGTACACAGA
AACTGTGAAAATCAATGATAGTGATGATGATGACGATTATGATGATGATG
ATGATTCCGATGATGACGTTGGCGAGTATACCACCGACAGCAGCTTCGAC
ACAGCTAGATCAGATGATGGTTGGGTGAATGGTGAGAGGGCTCATTTGAC
ATCGCTCGTTCGTAGTACTTCACGATTTGGTCCAAGTGAGTCAAGGGCCT
GAATTATTTTGCAGCCAATCGTTGCTTACCTTTACGTCTTCTAGATTCGA
GAAGCGCGACCGTTGAAGATGTCAGTAGTAGCATATATGAGGGATAATCG
TGCGACTATGCGTTGTGAAATTCCAAGTGAAGTAGTTTCGACGGCTAGAA
TCTATAATACATAGAACTAAAGTACCTCGACT back to topCoding sequence (CDS) from alignment at ch4:4008899..4011430- >KJC3_005879-T2 ID=KJC3_005879-T2|Name=KJC3_005879-T2|organism=Aspergillus niger KJC3|type=CDS|length=4512bp|location=Sequence derived from alignment at ch4:4008899..4011430- (Aspergillus niger KJC3)
GTGCAAGTGATCCGTTATGCGCTATTGATTCTATCGCAGGTTGAGCGTGA
AACAAATTTGATTGCAGAGCATGAGTTCAATTTCTGGTCTAACTGGCACT
ATCTGTACAGCGCTCTCGTGACTGAAGGGCGAGTATGGGATGCGCGAGAT
CTAATACTCGCTTCCATTCAGACGGAAGGTCCAGCAAATTCGTGGAACTT
GATCTTCGAAGTAGAACTTGATTCTCCCAAGGATGCGTTTCGCAAACTCA
TTGGCGACTGGGGCTTGCATCGGTACGATGAGTCAACATATCTCGCCATT
CTAGATATTCTAGTGTGTCTGAGCCGCGGTTTGTCCTCATGGTCTATCTC
GTTACCAGAGAGACAGGACTTGCTCACTGCTCAACGATGCCTCCAGTATG
GGCAAGCCCTTGCAACCTGCCTCAAGGAGAACAACCCGCAGCTGGTAAAA
TCTCGTCCTTACCTACAGTGGGTTATTGCTGAAGCGGAACTGGAGAGGAA
GCTTCAACCCAACACCTCAGGTTTAGATCTGCGAGACCACCTTAGCAAAT
TTCCAGGCCTGACCATCTGGAGGGGCGCTGTTCCTATTTATCTTCCTATC
AAAATGGAGAACCCGAAGTGGACGGTGCCTAGAGACGGTGGACGGAGCTA
TGATCTTCTTGAAACCGTCCTTCAAGCGGCACAAGACCTGAAGGACTACA
GGACAGAGGCCTTATGCTTGGGTGAGCTAATCTATCGTTCAGTAAACACG
AGCGAAAGATTGACTCGGTTATCCCATCTCCAGAAGTCCATTCAGGGGGA
TATTGTCGGCTATCGACAGACGTCCCTGTCGTGGTTCCTTCTTGCTGACA
CTGAACAAGACTACAAGCTTCTTCTAGACAGCTTGAAAAACATACAGGAA
CCGAAACGATCCCTAGGATTTCTCTATTCTCTGAGTGACTGGTGTGCAAT
TGTTATCGAACGAGCTATTTCACACTGCCTGGCGGAGGATGTATCGTCTT
CTGAAGAAGCTTTCCAAAACACCAAGGAGGGCTTCTCTATCTACCTCCCG
CAATACATAAAAGACCAGTTAGAGGCGCTCGGTCTGAATAAGGTATACTT
CGCAGTCTCAAGGGTCGGAAAGCCCCAGGCACCTGACATACGACATCGCA
ATATCACAGACGTTCCGACAATGGAACAGTATACTCGACCCCACGATTCT
TTTGAGAGTTTGGGTGACGAGAGACATGGGCAGTCTGAGCCACTGCTCTC
CTTTCAGAGACGACCAGAGCGCACGTACACAGAAACTGTGAAAATCAATG
ATAGTGATGATGATGACGATTATGATGATGATGATGATTCCGATGATGAC
GTTGGCGAGTATACCACCGACAGCAGCTTCGACACAGCTAGATCAGATGA
TGGTTGGGTGAATGGTGAGAGGGCTCATTTGACATCGCTCGTTCGTAGTA
CTTCACGATTTGGTCCAAGTGAGTCAAGGGCCTGAATGCACAACATTTGG
CAAAGGTCCTCCTCCACAAGAAGGAGACGATCCAGAGATCGACAAGGCCT
CTTTAACCGCTTTTCCTGGGATGAACGAGCGATTCATGGAAGGGCGCACG
ACGCCCTCGTTGTTCCTGAAAAGAATGTCCATTCATCCCGTGCGGAGCCT
GTACACTCTGGAGAAGCAATTGTCGTTCGTAATACTGCAGCTCATAACAA
CGACACTAAGATTTCTTCACTAGGCACACTCTCCAGAATACTGTCGGTAT
CACAGGATGGGCCACGAAACGATGGGTCTACCATCTGGACTCCCTCATCG
ACAAAAGATAAGACCATTCATTATGAGATGGACATCGTGGAGGATGTGGG
AAGCCTGTTGGAGGAATTCTCGCGACTCAAGAGACTAGGCCATTTCCAGG
AAGCGGAACAATACTTTCAAGATTCCTTGAGTGCGTTTATGGAACTATCA
CCAGTTACAATTGAGTTCGCAGACATGCTAGTCGAACAAGGTTCGTACGA
GCGTTTGCATCGCGTTCTGTCGCAGCACCAACAGCAGGAGCTAGATACAT
TTGACAGTATCTCAAGCCTGCCGGAGAACAACCGTGCCAGATTTCTATAT
CAAGCGAACTTGCACCTCATACAGCAATTCGCGGCCATGCAGTCCCACGG
GTCGCTGGACGAGGCATATGTAACAGTCCGATCCTTGGAGCGCCAAATGC
GTGTCCTAAGGCGACGTTGGAGGAGGGACTCGACTCTTGATCTGGACTCG
GCTGAAGTGCAAGTGATCCGTTATGCGCTATTGATTCTATCGCAGGTTGA
GCGTGAAACAAATTTGATTGCAGAGCATGAGTTCAATTTCTGGTCTAACT
GGCACTATCTGTACAGCGCTCTCGTGACTGAAGGGCGAGTATGGGATGCG
CGAGATCTAATACTCGCTTCCATTCAGACGGAAGGTCCAGCAAATTCGTG
GAACTTGATCTTCGAAGTAGAACTTGATTCTCCCAAGGATGCGTTTCGCA
AACTCATTGGCGACTGGGGCTTGCATCGGTACGATGAGTCAACATATCTC
GCCATTCTAGATATTCTAGTGTGTCTGAGCCGCGGTTTGTCCTCATGGTC
TATCTCGTTACCAGAGAGACAGGACTTGCTCACTGCTCAACGATGCCTCC
AGTATGGGCAAGCCCTTGCAACCTGCCTCAAGGAGAACAACCCGCAGCTG
GTAAAATCTCGTCCTTACCTACAGTGGGTTATTGCTGAAGCGGAACTGGA
GAGGAAGCTTCAACCCAACACCTCAGGTTTAGATCTGCGAGACCACCTTA
GCAAATTTCCAGGCCTGACCATCTGGAGGGGCGCTGTTCCTATTTATCTT
CCTATCAAAATGGAGAACCCGAAGTGGACGGTGCCTAGAGACGGTGGACG
GAGCTATGATCTTCTTGAAACCGTCCTTCAAGCGGCACAAGACCTGAAGG
ACTACAGGACAGAGGCCTTATGCTTGGGTGAGCTAATCTATCGTTCAGTA
AACACGAGCGAAAGATTGACTCGGTTATCCCATCTCCAGAAGTCCATTCA
GGGGGATATTGTCGGCTATCGACAGACGTCCCTGTCGTGGTTCCTTCTTG
CTGACACTGAACAAGACTACAAGCTTCTTCTAGACAGCTTGAAAAACATA
CAGGAACCGAAACGATCCCTAGGATTTCTCTATTCTCTGAGTGACTGGTG
TGCAATTGTTATCGAACGAGCTATTTCACACTGCCTGGCGGAGGATGTAT
CGTCTTCTGAAGAAGCTTTCCAAAACACCAAGGAGGGCTTCTCTATCTAC
CTCCCGCAATACATAAAAGACCAGTTAGAGGCGCTCGGTCTGAATAAGGT
ATACTTCGCAGTCTCAAGGGTCGGAAAGCCCCAGGCACCTGACATACGAC
ATCGCAATATCACAGACGTTCCGACAATGGAACAGTATACTCGACCCCAC
GATTCTTTTGAGAGTTTGGGTGACGAGAGACATGGGCAGTCTGAGCCACT
GCTCTCCTTTCAGAGACGACCAGAGCGCACGTACACAGAAACTGTGAAAA
TCAATGATAGTGATGATGATGACGATTATGATGATGATGATGATTCCGAT
GATGACGTTGGCGAGTATACCACCGACAGCAGCTTCGACACAGCTAGATC
AGATGATGGTTGGGTGAATGGTGAGAGGGCTCATTTGACATCGCTCGTTC
GTAGTACTTCACGATTTGGTCCAAGTGAGTCAAGGGCCTGAATGCACAAC
ATTTGGCAAAGGTCCTCCTCCACAAGAAGGAGACGATCCAGAGATCGACA
AGGCCTCTTTAACCGCTTTTCCTGGGATGAACGAGCGATTCATGGAAGGG
CGCACGACGCCCTCGTTGTTCCTGAAAAGAATGTCCATTCATCCCGTGCG
GAGCCTGTACACTCTGGAGAAGCAATTGTCGTTCGTAATACTGCAGCTCA
TAACAACGACACTAAGATTTCTTCACTAGGCACACTCTCCAGAATACTGT
CGGTATCACAGGATGGGCCACGAAACGATGGGTCTACCATCTGGACTCCC
TCATCGACAAAAGATAAGACCATTCATTATGAGATGGACATCGTGGAGGA
TGTGGGAAGCCTGTTGGAGGAATTCTCGCGACTCAAGAGACTAGGCCATT
TCCAGGAAGCGGAACAATACTTTCAAGATTCCTTGAGTGCGTTTATGGAA
CTATCACCAGTTACAATTGAGTTCGCAGACATGCTAGTCGAACAAGGTTC
GTACGAGCGTTTGCATCGCGTTCTGTCGCAGCACCAACAGCAGGAGCTAG
ATACATTTGACAGTATCTCAAGCCTGCCGGAGAACAACCGTGCCAGATTT
CTATATCAAGCGAACTTGCACCTCATACAGCAATTCGCGGCCATGCAGTC
CCACGGGTCGCTGGACGAGGCATATGTAACAGTCCGATCCTTGGAGCGCC
AAATGCGTGTCCTAAGGCGACGTTGGAGGAGGGACTCGACTCTTGATCTG
GACTCGGCTGAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005879-T2.utr3p1 | KJC3_005879-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005879-T2.utr5p1 | KJC3_005879-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4008899..4011430 - |
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