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KJC3_005883-T1, KJC3_005883-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005883-T1
Unique NameKJC3_005883-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4017532..4019023+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005883-T1 ID=KJC3_005883-T1|Name=KJC3_005883-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1492bp|location=Sequence derived from alignment at ch4:4017532..4019023+ (Aspergillus niger KJC3)
TGCCCCCGACCGTCAGGGTCACACCTGTCTCTGTTGTGCACAATGGCAGG
GTCAGCAGGGAGATCTTACTCTCTCTCTCTCTCTCTCTATATTTTCTATC
ATTTGAGGATCCTTATGTCTTCTATTTGCAGAATGCAATAATCCATCCTA
ATCAGCTCCACTCACCACTTACCCCGCGCCCAATTTTCCATCACAAGCAA
GCACCAGGCACCTGAAGGGGCCAAATTAATTTACCCACTCTCTAGAATTC
TGTTTTGGCATAATCAAATTTCAAAAGAAGCTGCGGATCCTCTGAGAATG
AGCTTAACAGTTCCTGGGCGAAAACGTCATGGACTGGATTTTGCGCCGGG
AAAAGTCCGGCTGCGGAGCACAAGCTATATTCGACCCTCGGAGTTAATGC
GAGACCATCCCACAATGACGACTGCTAGCTGAGCATATTACTGACAATGT
TGTCTGCTTCATAGAGCCTTAACAAATAATCAATTCTCACACCTACCTCC
CACCATAACCGTTAACTTCCTCAATTGACCCTCCAAAGATGCAAATCCTC
ATCACAGGAGCAGCGGGCTTCATCGGCCAACTCCTCGCAAAGGAGCTCCT
CAACGACCCATCATACATCGTCACACTAACCGATATAAACGAGCCCCCAA
TTCCCACAGGCGTCGCATACCCTCAGAATGCACGATCGGTGACAACAGAC
CTCCTGAAAGGCGCAGACGCAGTCGTGGACAAATCTCTCGATGCCGTCTA
CGCTTTCCACGGAATCATGTCGTCCGGATCTGAAGCCAATTTCGACTTGG
GCATGAGCGTCAACGTAGATGCTACCCGGAACTTGCTTGAGGCGCTCCGC
AGAACCTGCCCCGGCGTGCGGGTAATCTATTCCTCGAGTCAGGCTGTCTA
TGGCCAGCCACTACCCGAAGTAGTAAACGACAGTGTCATCCCGACGCCGC
AGTCGTCCTACGGCGCCGAGAAGATCATCTGTGAGACTCTTATCAATGAG
TACACTCGCCGTGGCTTCATCACGGGATTCACTCTTCGGTTCCCCACTAT
TTCTGTCCGTCCTGGTCGTCCAACAGCTGCCGCTTCGTCTTTTCTTTCTG
GGATGATCCGCGAGCCGCTCGACGGCAAGGAGTGTGTCATTCCGCTGGAG
GATAGGTCATTCAAGTCTTGGCTATGCTCGCCGAAAACTCTTGTTCATAA
CCTCGTCCATACATTGTCGTTGCCCAAGGATGCGTTGCCTCCTCATATCC
GACAGATTAATGTGCCTGGTATTTGTGTCACCATTCAGGACATGATGGAT
GCTTTGGAGAAGGTTGCAGGGAAGGATAAGCTCGGTCTGTTAAAGGAGAC
GGAGGATCCGACCCTCAGACCGATTTTGGAGTCCTGGCCTACACGCTTCG
ACAATTCCCAGGCTATTTCACTGGGCTTTAAGCGGGACTCTTCGTTTGAG
CAAGCAGTAAGAGATTACCAGTTGGAGATAGGACAGCAATAA
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Coding sequence (CDS) from alignment at ch4:4017532..4019023+

>KJC3_005883-T1 ID=KJC3_005883-T1|Name=KJC3_005883-T1|organism=Aspergillus niger KJC3|type=CDS|length=954bp|location=Sequence derived from alignment at ch4:4017532..4019023+ (Aspergillus niger KJC3)
ATGCAAATCCTCATCACAGGAGCAGCGGGCTTCATCGGCCAACTCCTCGC
AAAGGAGCTCCTCAACGACCCATCATACATCGTCACACTAACCGATATAA
ACGAGCCCCCAATTCCCACAGGCGTCGCATACCCTCAGAATGCACGATCG
GTGACAACAGACCTCCTGAAAGGCGCAGACGCAGTCGTGGACAAATCTCT
CGATGCCGTCTACGCTTTCCACGGAATCATGTCGTCCGGATCTGAAGCCA
ATTTCGACTTGGGCATGAGCGTCAACGTAGATGCTACCCGGAACTTGCTT
GAGGCGCTCCGCAGAACCTGCCCCGGCGTGCGGGTAATCTATTCCTCGAG
TCAGGCTGTCTATGGCCAGCCACTACCCGAAGTAGTAAACGACAGTGTCA
TCCCGACGCCGCAGTCGTCCTACGGCGCCGAGAAGATCATCTGTGAGACT
CTTATCAATGAGTACACTCGCCGTGGCTTCATCACGGGATTCACTCTTCG
GTTCCCCACTATTTCTGTCCGTCCTGGTCGTCCAACAGCTGCCGCTTCGT
CTTTTCTTTCTGGGATGATCCGCGAGCCGCTCGACGGCAAGGAGTGTGTC
ATTCCGCTGGAGGATAGGTCATTCAAGTCTTGGCTATGCTCGCCGAAAAC
TCTTGTTCATAACCTCGTCCATACATTGTCGTTGCCCAAGGATGCGTTGC
CTCCTCATATCCGACAGATTAATGTGCCTGGTATTTGTGTCACCATTCAG
GACATGATGGATGCTTTGGAGAAGGTTGCAGGGAAGGATAAGCTCGGTCT
GTTAAAGGAGACGGAGGATCCGACCCTCAGACCGATTTTGGAGTCCTGGC
CTACACGCTTCGACAATTCCCAGGCTATTTCACTGGGCTTTAAGCGGGAC
TCTTCGTTTGAGCAAGCAGTAAGAGATTACCAGTTGGAGATAGGACAGCA
ATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005883KJC3_005883Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005883-T1.utr5p1KJC3_005883-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_005883-T1.utr5p2KJC3_005883-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005883-T1.exon1KJC3_005883-T1.exon1Aspergillus niger KJC3exon
KJC3_005883-T1.exon2KJC3_005883-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005883-T1.cdsKJC3_005883-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005883-T1KJC3_005883-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR001509
DBxrefPFAM:PF04321
DBxrefPFAM:PF01370
DBxrefPFAM:PF01073
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4017532..4019023 +
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