You are here

Home

KJC3_005896-T1, KJC3_005896-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005896-T1
Unique NameKJC3_005896-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4062415..4064645+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005896-T1 ID=KJC3_005896-T1|Name=KJC3_005896-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2231bp|location=Sequence derived from alignment at ch4:4062415..4064645+ (Aspergillus niger KJC3)
ATGTCCACCAAGTTTCCCACTACTACCGTCACTCCCATCGAAATGGTGTC
TCAAGCTCAGGTCCTCGATCGCTCCGTCCCGCCGCAAAGCGCTGCCTCCT
CCGTGTCGCGCCATTCTCATTCCAGCCGGCGACACCGTTCCAGTCGTTCT
CATCATGGAGGACTCACCCATCAAATGCAAAACGACTTTCCTATTTTCAC
GCACACCGGCGATGTCGAGATTGTTGTGCGCGCAGGGGATCAGGAGCGAC
GATACCTCCTGCATCGATTGATATTGGCGCAATGCTCGGGCTTCTTCGAG
GCAAGTACCCGGGAGGAGTGGTCGCGACAATCCATTCCGAGGCCTCCAAA
CCTGGACACGGGCGTGCTGTCGAGGATTAGTGAAGATGCCTCTTCGCTAT
CAAACGGATCAACCTTGGCCCAATCGGAAAGTGGAGGATCCGCTTGGTCG
GTCGAAAAGAGGCGCTGGAGGTATGAACTGGACTGGGTAAACAAGGAGGA
GGATGAGGAGCCAATTCTGGTACAGAAGGTGAGCTGATCTGAAGCCTCGT
GAATCTGCCACTAGCAATGCTCATCGTTGAATCTCTATAGCCTCCAAGCT
TTTCCAGCGCATTTGGTTGCGACGCGGGACAATATCCTCCATCTGTGACC
AAACCGTCCAGCTCTCAAACGGGCTTTGTCCGGTCGATGGCCAACCTGGC
CGGGATGCAGTCGGTGGTCAACCTCCCTCATCGATCTGGGACGGCAAATC
CCCCTACAAACCCCATCGTTCGCGATTACGACAATCTGTTCCGCCTGTTC
TACAATTACCCGCCGCTGCTCAACAGCGTCAACATCGCAACCGCCTACGC
CGAGTGCCGGGCCCTGCTCAACCTGGCCGACATGTACGATGCGCTACCTG
TGACTGGACCTCGCGTCGACCACCATTTACTGGGCTTTGGCTCGCGCCTC
TTCAAGCAGATCGCCAAGTATCCCCCGAGCTACCTGAAGCTGGGCTACCT
GGCGCGCAGCCGCGTCATCTTCTCCGAGGCCCTCATCCACGTCGTGGGAC
AATGGCCGGCCGGCCTGCCTCATCTGCGCAACGGACCATATTCGCCGCTC
CCCAATTCCGTCCTCGACATCATCGAGGATAAGGTCGAGGACCTGGAAGA
CCTGAAAGCGCGCATCGACTCCAAGCTCCTGCGGCTCACGCTGACCACCT
CCCGCGGCGAGCGCGTCAGTCCCACCAACGCCTACCTGGACTGGCTGGCC
GTCTCGCTCTTCCGACAATGGCTCGTCGACAGCACCACTCCCCCGCCGAC
TCCCATCCTCAAGAACTCTTCAGCGAATGCACACGCCAGCACCAGCACCC
ACGGCATTCGCAGTTCACAATCGACCAGCCACCGCCCAACAGAATCGACT
TCCAAGCCCACAACCACCGCACCACCCTGGTCCGCTGCACGAGTCTACCG
GCTCATCGGCTCCCCCAGCAGCCAAGCCTACCTATCACACGAGGACCTGA
AACGATTCCTCAAAGTGCACCCAACTCCTTCCTCGGAATCACTGTATACG
CGCGAAGTCCTGAAACGGTTCGAGCGCAAAATGGACGAGATCAAGCGGCT
GGCCCGCGAGATAGTCAAGCCGCTCATGCGCAATTTCCTCGAATTGGATC
TGAAGGGAAGCGAATACAGCGAGGGTGGGTTGCCGTATTTAACGTGCACT
AAAGTCGACGACGAAGATATCCCGTGGGAGTGATCAGCCTATTCCACACA
ACACATATCCCTTATTACGCAATTACGTCCAATAACGATACCCTGGAAGT
TTACGGAAACAAAGTCAGTCACGATTTTTATCTCAGATACCTTATGTTGT
TTTATGTTTGATGGTCTACGCTTCTTGCTGCTTCTATAATTTTACCCTCC
CCCCCGCGCCCCCCAATTGCATGTCCTTAGTGATGTTTATGCATACCATG
TCATGTCTAATTTGTTTTCATTTCATTTCTTGTCTTTTTTTTGCCATGCC
ATATGTTCTGGGTTTCCATAGTAACGAGACGACCTGAATGTGTCCACGAT
GTCATGATTCTTCTTTTTCTCCCCTTCCTCTTTCTGTTCTTGTTTGTTTC
TCATGCACGATTACGCACGCCATGTCAAAGAGTAACCTACACCTACTAGC
TAGTGATGAAGTTTTTTTTCTTTTTCAATATAGATAGGTGGCCGGATATA
CAATGCAGGGTCTTACCTTCTATCTCAATAT
back to top

Coding sequence (CDS) from alignment at ch4:4062415..4064645+

>KJC3_005896-T1 ID=KJC3_005896-T1|Name=KJC3_005896-T1|organism=Aspergillus niger KJC3|type=CDS|length=3342bp|location=Sequence derived from alignment at ch4:4062415..4064645+ (Aspergillus niger KJC3)
ATGTCCACCAAGTTTCCCACTACTACCGTCACTCCCATCGAAATGGTGTC
TCAAGCTCAGGTCCTCGATCGCTCCGTCCCGCCGCAAAGCGCTGCCTCCT
CCGTGTCGCGCCATTCTCATTCCAGCCGGCGACACCGTTCCAGTCGTTCT
CATCATGGAGGACTCACCCATCAAATGCAAAACGACTTTCCTATTTTCAC
GCACACCGGCGATGTCGAGATTGTTGTGCGCGCAGGGGATCAGGAGCGAC
GATACCTCCTGCATCGATTGATATTGGCGCAATGCTCGGGCTTCTTCGAG
GCAAGTACCCGGGAGGAGTGGTCGCGACAATCCATTCCGAGGCCTCCAAA
CCTGGACACGGGCGTGCTGTCGAGGATTAGTGAAGATGCCTCTTCGCTAT
CAAACGGATCAACCTTGGCCCAATCGGAAAGTGGAGGATCCGCTTGGTCG
GTCGAAAAGAGGCGCTGGAGGTATGAACTGGACTGGGTAAACAAGGAGGA
GGATGAGGAGCCAATTCTGGTACAGAAGCCTCCAAGCTTTTCCAGCGCAT
TTGGTTGCGACGCGGGACAATATCCTCCATCTGTGACCAAACCGTCCAGC
TCTCAAACGGGCTTTGTCCGGTCGATGGCCAACCTGGCCGGGATGCAGTC
GGTGGTCAACCTCCCTCATCGATCTGGGACGGCAAATCCCCCTACAAACC
CCATCGTTCGCGATTACGACAATCTGTTCCGCCTGTTCTACAATTACCCG
CCGCTGCTCAACAGCGTCAACATCGCAACCGCCTACGCCGAGTGCCGGGC
CCTGCTCAACCTGGCCGACATGTACGATGCGCTACCTGTGACTGGACCTC
GCGTCGACCACCATTTACTGGGCTTTGGCTCGCGCCTCTTCAAGCAGATC
GCCAAGTATCCCCCGAGCTACCTGAAGCTGGGCTACCTGGCGCGCAGCCG
CGTCATCTTCTCCGAGGCCCTCATCCACGTCGTGGGACAATGGCCGGCCG
GCCTGCCTCATCTGCGCAACGGACCATATTCGCCGCTCCCCAATTCCGTC
CTCGACATCATCGAGGATAAGGTCGAGGACCTGGAAGACCTGAAAGCGCG
CATCGACTCCAAGCTCCTGCGGCTCACGCTGACCACCTCCCGCGGCGAGC
GCGTCAGTCCCACCAACGCCTACCTGGACTGGCTGGCCGTCTCGCTCTTC
CGACAATGGCTCGTCGACAGCACCACTCCCCCGCCGACTCCCATCCTCAA
GAACTCTTCAGCGAATGCACACGCCAGCACCAGCACCCACGGCATTCGCA
GTTCACAATCGACCAGCCACCGCCCAACAGAATCGACTTCCAAGCCCACA
ACCACCGCACCACCCTGGTCCGCTGCACGAGTCTACCGGCTCATCGGCTC
CCCCAGCAGCCAAGCCTACCTATCACACGAGGACCTGAAACGATTCCTCA
AAGTGCACCCAACTCCTTCCTCGGAATCACTGTATACGCGCGAAGTCCTG
AAACGGTTCGAGCGCAAAATGGACGAGATCAAGCGGCTGGCCCGCGAGAT
AGTCAAGCCGCTCATGCGCAATTTCCTCGAATTGGATCTGAAGGGAAGCG
AATACAGCGAGGGTGGGTTGCCGTATTTAACGTGCACTAAAGTCGACGAC
GAAGATATCCCGTGGGAGTGAATGTCCACCAAGTTTCCCACTACTACCGT
CACTCCCATCGAAATGGTGTCTCAAGCTCAGGTCCTCGATCGCTCCGTCC
CGCCGCAAAGCGCTGCCTCCTCCGTGTCGCGCCATTCTCATTCCAGCCGG
CGACACCGTTCCAGTCGTTCTCATCATGGAGGACTCACCCATCAAATGCA
AAACGACTTTCCTATTTTCACGCACACCGGCGATGTCGAGATTGTTGTGC
GCGCAGGGGATCAGGAGCGACGATACCTCCTGCATCGATTGATATTGGCG
CAATGCTCGGGCTTCTTCGAGGCAAGTACCCGGGAGGAGTGGTCGCGACA
ATCCATTCCGAGGCCTCCAAACCTGGACACGGGCGTGCTGTCGAGGATTA
GTGAAGATGCCTCTTCGCTATCAAACGGATCAACCTTGGCCCAATCGGAA
AGTGGAGGATCCGCTTGGTCGGTCGAAAAGAGGCGCTGGAGGTATGAACT
GGACTGGGTAAACAAGGAGGAGGATGAGGAGCCAATTCTGGTACAGAAGC
CTCCAAGCTTTTCCAGCGCATTTGGTTGCGACGCGGGACAATATCCTCCA
TCTGTGACCAAACCGTCCAGCTCTCAAACGGGCTTTGTCCGGTCGATGGC
CAACCTGGCCGGGATGCAGTCGGTGGTCAACCTCCCTCATCGATCTGGGA
CGGCAAATCCCCCTACAAACCCCATCGTTCGCGATTACGACAATCTGTTC
CGCCTGTTCTACAATTACCCGCCGCTGCTCAACAGCGTCAACATCGCAAC
CGCCTACGCCGAGTGCCGGGCCCTGCTCAACCTGGCCGACATGTACGATG
CGCTACCTGTGACTGGACCTCGCGTCGACCACCATTTACTGGGCTTTGGC
TCGCGCCTCTTCAAGCAGATCGCCAAGTATCCCCCGAGCTACCTGAAGCT
GGGCTACCTGGCGCGCAGCCGCGTCATCTTCTCCGAGGCCCTCATCCACG
TCGTGGGACAATGGCCGGCCGGCCTGCCTCATCTGCGCAACGGACCATAT
TCGCCGCTCCCCAATTCCGTCCTCGACATCATCGAGGATAAGGTCGAGGA
CCTGGAAGACCTGAAAGCGCGCATCGACTCCAAGCTCCTGCGGCTCACGC
TGACCACCTCCCGCGGCGAGCGCGTCAGTCCCACCAACGCCTACCTGGAC
TGGCTGGCCGTCTCGCTCTTCCGACAATGGCTCGTCGACAGCACCACTCC
CCCGCCGACTCCCATCCTCAAGAACTCTTCAGCGAATGCACACGCCAGCA
CCAGCACCCACGGCATTCGCAGTTCACAATCGACCAGCCACCGCCCAACA
GAATCGACTTCCAAGCCCACAACCACCGCACCACCCTGGTCCGCTGCACG
AGTCTACCGGCTCATCGGCTCCCCCAGCAGCCAAGCCTACCTATCACACG
AGGACCTGAAACGATTCCTCAAAGTGCACCCAACTCCTTCCTCGGAATCA
CTGTATACGCGCGAAGTCCTGAAACGGTTCGAGCGCAAAATGGACGAGAT
CAAGCGGCTGGCCCGCGAGATAGTCAAGCCGCTCATGCGCAATTTCCTCG
AATTGGATCTGAAGGGAAGCGAATACAGCGAGGGTGGGTTGCCGTATTTA
ACGTGCACTAAAGTCGACGACGAAGATATCCCGTGGGAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005896KJC3_005896Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005896-T1.exon1KJC3_005896-T1.exon1Aspergillus niger KJC3exon
KJC3_005896-T1.exon2KJC3_005896-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005896-T1.cdsKJC3_005896-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005896-T1.utr3p1KJC3_005896-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005896-T1KJC3_005896-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR000210
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4062415..4064645 +
Powered by Drupal