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KJC3_005935-T1, KJC3_005935-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005935-T1
Unique NameKJC3_005935-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4198392..4201086+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005935-T1 ID=KJC3_005935-T1|Name=KJC3_005935-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2695bp|location=Sequence derived from alignment at ch4:4198392..4201086+ (Aspergillus niger KJC3)
GCTGTATTGTTGTATTATTGTGTCGAGAGTAAACCTGACTGACCGGTATT
GTAACTGATGTCAACCTGTCTCCCTCTGCCGTCTTTCTCTCTCCTTCTCT
CTTCCTCATTTGCTTTCCCCCTCCATGATATCAGTCCCCGAACTTGATCA
AGGATCCGAGTTCACCCATTCTCATTTTCGCCGAACAAGTGAGTTTCATC
CGGTTTTCTCGACGGATGGATGGTGAGTAAGTTTGAATCACCCATCCCTC
CCCCTCCCATTTTTCCCGTTTGCACGGTACCTTCCGGGCGTGTCTTTTGC
CTGCCGATGCCGGTTGGCGCCTTGACCGTTCCGCGGAGCGAATCATATCG
CCAGCCTCTCCATCATCATCTATTATTGTCAAGGATACCTTTCGAATATG
TATGGCTGACTGGCTTCTACTAAGTTCTCAGACGCACCACTACTAGACAC
TATGATCAAATAGGAACAATTCAACTATGTTGTAACTTTGGGAGCAAGTG
GGGTTCGAACAACCAGAATTTGCAACCGTTACTGAAAACACAGCTTCCAG
TTCACCAGTGAGGTTGAGTCTTTTCTTGTCCCGATGCGGTCGATGACGGC
GCCACGGGCTGCATCACCCAAGGGAGAAGATGCTAGGCGTCCTCCACCGC
TTGCTCGTTTACTCCTATATAATGGCTCTGGACTCCCATTGTCTGTCAGG
AAGTGGTCCTCTATCTCCCCAGACTCCTCTCACTCCACTGAACCCCATTT
CGTACTTCGCCTCCTTCATCTTGTGTATCATACTCTCCTCTTTCTCTTCT
TGCTTGCTGCACATTATCAATTCCCCTGAGGGAACATAATTTTGTGTAGT
ATATTGTCTTATCAGTGTGCATCCTTGCAACGCCGGTTTACGTGCATTGT
CTGGTCCCATTGATCATTCTGGTTTTGCTTGTGATCTTGTTTGACCTCGC
GTTGGCCAGACGACGTTGCCCCTGAAGATCGACTGACGTCGTTGTCGATT
GTCTTCCGCAGTAACCGTTTCTTGTTCATATTCTGGGTCCACAAAAGGTC
CACTTCTATTGTTGCCACCCGCCGGAGATCCACCACTATTGCTATCCACA
ATGACAACAGCCGACGGATATGCTACCCCACGGGTAAGCCGGTTGTCGAG
CCTGGACGCATCCCAGGCCGACCTCTACGGCGGTCCCAGTGTGGTCGTCC
CTCCTAAACACTTGATGGCTTCGACCATGTCTCATGAAACAGCCATGGAA
TTGGAAGCCGCCAAACAACATTTCGACGAAGAGGTTTCCTCCGAAGAAGG
TTCCCCTCGAGTTGCTCCCCCTGTGACTAAGAAGGCCCTCACCACTGCCG
ACGACTTTGCTCTGGCCTTTGATATTGACGGAGTCCTTATCAGAGGTGGG
AAGGCTATCCCTGAAGCTGCCAGTGCACTCAGGTACATCAATGGAGAGAA
TCCTTATGGTATTAAAGTGTATGTATCGATATCCTCTACCGTATTATAGC
GGTGCTCCCTTCTCAAATGGTAGTCCCGTGCTGACTGCTCTACCAGACCT
TACATTTTTGTTACAAACGGTGGAGGCAAGACGGAGGAAGAACGATGCCT
TGATCTCAGTCGACAGCTCGAGCTCGAAGTCTCCCCCGGCCAATTTATCT
GTGGCCATACCCCGATGCGCGAAATGGCCGAGCGGTACCACACGGTTCTT
GTTGTCGGCGGTGAGGGTGAGAAATGCCGTATTGTAGCTGAAGGCTACGG
CTTCAAGGATGTCATCACCCCCGGAGACATCATCAAGACTAGACAAGACA
CTACACCGTTCCGGAAATTGACCGACGAGGAATACAAGAACTCCCGAGTC
CGGGACTTTTCGCAAACGAAGATCGAGGCGATCTTTGTCTTTGCGGATAG
TCGGGACTGGGCCGGTGACCAACAGATTATCCTCGATGTCCTGATGTCCA
AGAATGGACACCTAGACACCCGATCCGACTCCTTTGACGAGGGCCCGCCT
GTGTTCTTCTCCCACAACGACGTGGTTTGGTCCACCTCCCACGAACATTC
CCGAATCGGCATGGGTGCACTCAGAGCGTCGCTAGAGGCGTTGTACAAAG
CCGTCACTGGCAAAGAGCTCAACACGATCGCCTTTGGCAAGCCCCAACTC
GGCACATACCAGTTCGCTACGCGGTTGTTGCGACAATGGCGCAAGAACAC
TCATGCCATCAACAAACCTCCCAGCACTGTGTACTTTGTGGGCGATACCC
CCGAGTCAGACATCAGGGGCACGAACGAGTTCAACAAGACCAGTGACGCT
GACTGGTTCTCCATCCTGGTCAAGACCGGTGTGTACCAAGAGGGCACTAT
CCCCCGTTATCCACCCAAAAAGACCTGCAATCATATCCTGGACGCGGTCA
AATTCGCCATTGACCGCGAAATGGCCAAAGAGAAGAAAGAGGGGTCGACT
GTCGTTGACGACGTTGACTCGGAACTTGAGCTAGAAGCGGGCCTTCTGCC
CAACTGAGTTCTTTGCTACTGATGGTAGCTGGATGATACAAGTGTGATGC
ATGTAGATTCCTATCATTCTTGTTTATTACTTTGTTATGGATACCTCTAT
GCTATGAATGTATGACAGATATGTATGTCTTTTGGCGTTGTGTTTACTAC
ATTCATCTTCTATACTATTATTATTGTTAGGAATTTCATCAAGGC
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Coding sequence (CDS) from alignment at ch4:4198392..4201086+

>KJC3_005935-T1 ID=KJC3_005935-T1|Name=KJC3_005935-T1|organism=Aspergillus niger KJC3|type=CDS|length=2658bp|location=Sequence derived from alignment at ch4:4198392..4201086+ (Aspergillus niger KJC3)
ATGACAACAGCCGACGGATATGCTACCCCACGGGTAAGCCGGTTGTCGAG
CCTGGACGCATCCCAGGCCGACCTCTACGGCGGTCCCAGTGTGGTCGTCC
CTCCTAAACACTTGATGGCTTCGACCATGTCTCATGAAACAGCCATGGAA
TTGGAAGCCGCCAAACAACATTTCGACGAAGAGGTTTCCTCCGAAGAAGG
TTCCCCTCGAGTTGCTCCCCCTGTGACTAAGAAGGCCCTCACCACTGCCG
ACGACTTTGCTCTGGCCTTTGATATTGACGGAGTCCTTATCAGAGGTGGG
AAGGCTATCCCTGAAGCTGCCAGTGCACTCAGGTACATCAATGGAGAGAA
TCCTTATGGTATTAAAGTACCTTACATTTTTGTTACAAACGGTGGAGGCA
AGACGGAGGAAGAACGATGCCTTGATCTCAGTCGACAGCTCGAGCTCGAA
GTCTCCCCCGGCCAATTTATCTGTGGCCATACCCCGATGCGCGAAATGGC
CGAGCGGTACCACACGGTTCTTGTTGTCGGCGGTGAGGGTGAGAAATGCC
GTATTGTAGCTGAAGGCTACGGCTTCAAGGATGTCATCACCCCCGGAGAC
ATCATCAAGACTAGACAAGACACTACACCGTTCCGGAAATTGACCGACGA
GGAATACAAGAACTCCCGAGTCCGGGACTTTTCGCAAACGAAGATCGAGG
CGATCTTTGTCTTTGCGGATAGTCGGGACTGGGCCGGTGACCAACAGATT
ATCCTCGATGTCCTGATGTCCAAGAATGGACACCTAGACACCCGATCCGA
CTCCTTTGACGAGGGCCCGCCTGTGTTCTTCTCCCACAACGACGTGGTTT
GGTCCACCTCCCACGAACATTCCCGAATCGGCATGGGTGCACTCAGAGCG
TCGCTAGAGGCGTTGTACAAAGCCGTCACTGGCAAAGAGCTCAACACGAT
CGCCTTTGGCAAGCCCCAACTCGGCACATACCAGTTCGCTACGCGGTTGT
TGCGACAATGGCGCAAGAACACTCATGCCATCAACAAACCTCCCAGCACT
GTGTACTTTGTGGGCGATACCCCCGAGTCAGACATCAGGGGCACGAACGA
GTTCAACAAGACCAGTGACGCTGACTGGTTCTCCATCCTGGTCAAGACCG
GTGTGTACCAAGAGGGCACTATCCCCCGTTATCCACCCAAAAAGACCTGC
AATCATATCCTGGACGCGGTCAAATTCGCCATTGACCGCGAAATGGCCAA
AGAGAAGAAAGAGGGGTCGACTGTCGTTGACGACGTTGACTCGGAACTTG
AGCTAGAAGCGGGCCTTCTGCCCAACTGAATGACAACAGCCGACGGATAT
GCTACCCCACGGGTAAGCCGGTTGTCGAGCCTGGACGCATCCCAGGCCGA
CCTCTACGGCGGTCCCAGTGTGGTCGTCCCTCCTAAACACTTGATGGCTT
CGACCATGTCTCATGAAACAGCCATGGAATTGGAAGCCGCCAAACAACAT
TTCGACGAAGAGGTTTCCTCCGAAGAAGGTTCCCCTCGAGTTGCTCCCCC
TGTGACTAAGAAGGCCCTCACCACTGCCGACGACTTTGCTCTGGCCTTTG
ATATTGACGGAGTCCTTATCAGAGGTGGGAAGGCTATCCCTGAAGCTGCC
AGTGCACTCAGGTACATCAATGGAGAGAATCCTTATGGTATTAAAGTACC
TTACATTTTTGTTACAAACGGTGGAGGCAAGACGGAGGAAGAACGATGCC
TTGATCTCAGTCGACAGCTCGAGCTCGAAGTCTCCCCCGGCCAATTTATC
TGTGGCCATACCCCGATGCGCGAAATGGCCGAGCGGTACCACACGGTTCT
TGTTGTCGGCGGTGAGGGTGAGAAATGCCGTATTGTAGCTGAAGGCTACG
GCTTCAAGGATGTCATCACCCCCGGAGACATCATCAAGACTAGACAAGAC
ACTACACCGTTCCGGAAATTGACCGACGAGGAATACAAGAACTCCCGAGT
CCGGGACTTTTCGCAAACGAAGATCGAGGCGATCTTTGTCTTTGCGGATA
GTCGGGACTGGGCCGGTGACCAACAGATTATCCTCGATGTCCTGATGTCC
AAGAATGGACACCTAGACACCCGATCCGACTCCTTTGACGAGGGCCCGCC
TGTGTTCTTCTCCCACAACGACGTGGTTTGGTCCACCTCCCACGAACATT
CCCGAATCGGCATGGGTGCACTCAGAGCGTCGCTAGAGGCGTTGTACAAA
GCCGTCACTGGCAAAGAGCTCAACACGATCGCCTTTGGCAAGCCCCAACT
CGGCACATACCAGTTCGCTACGCGGTTGTTGCGACAATGGCGCAAGAACA
CTCATGCCATCAACAAACCTCCCAGCACTGTGTACTTTGTGGGCGATACC
CCCGAGTCAGACATCAGGGGCACGAACGAGTTCAACAAGACCAGTGACGC
TGACTGGTTCTCCATCCTGGTCAAGACCGGTGTGTACCAAGAGGGCACTA
TCCCCCGTTATCCACCCAAAAAGACCTGCAATCATATCCTGGACGCGGTC
AAATTCGCCATTGACCGCGAAATGGCCAAAGAGAAGAAAGAGGGGTCGAC
TGTCGTTGACGACGTTGACTCGGAACTTGAGCTAGAAGCGGGCCTTCTGC
CCAACTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005935KJC3_005935Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005935-T1KJC3_005935-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005935-T1.utr5p1KJC3_005935-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_005935-T1.utr5p2KJC3_005935-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005935-T1.exon1KJC3_005935-T1.exon1Aspergillus niger KJC3exon
KJC3_005935-T1.exon2KJC3_005935-T1.exon2Aspergillus niger KJC3exon
KJC3_005935-T1.exon3KJC3_005935-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005935-T1.cdsKJC3_005935-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005935-T1.utr3p1KJC3_005935-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036412
DBxrefInterPro:IPR006353
DBxrefInterPro:IPR006357
DBxrefInterPro:IPR023214
DBxrefPFAM:PF13242
DBxrefPFAM:PF13344
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4198392..4201086 +
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