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KJC3_005991-T1, KJC3_005991-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005991-T1
Unique NameKJC3_005991-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4336865..4339601+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005991-T1 ID=KJC3_005991-T1|Name=KJC3_005991-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2737bp|location=Sequence derived from alignment at ch4:4336865..4339601+ (Aspergillus niger KJC3)
AGTAGTGTTGTTTTTTCTTTTTCATGCAGTCCCTAGGTCTTGGGGTTTAA
TTCTTCTGGGTTGTTTCTTCTACACTCGATTCTCTGAGACTTTCTTTCCT
TTCTACTCTTCTCTCTTTTCGTTGCTCGCACCCATCCTTCTCTCGCACCC
CTCTTGCACTCTTTTGTTTTTTGGTTAACTATTCTCGATTTATCTATCAG
ACTCGCCCGGGCGGTTGGTGTTCGTTATCAGGAGTTCTTGTTGATCACAT
CGGTCTTTTCCTTGGCCACTCGAGCTGCTAGCCTGTCGATTTTTCCCCTT
ACCTACGCCATTCAGCCTCTCGATACCGCCTTATATCCCCTATTGACGCA
TCACATATTTCTTCCTTGACCAGCAGCGTTACCCTTGCGTCTGACCCCTG
AGGGTGTGTCTCAGCCGCGCTAAGGGAATTAACTCGATTCCTATACTATA
ACAATCTACCGAGAACGCTCTGTCCTAAGTGTCCCCCGCGTGGCTGGCCT
TAATTGAGATTGTCACTGTGACATCGATCGCCGTCATGGCTCCACGAGAC
TCTAGCACTATTACGTCCCGTCGACGCCCCTCTTTCTCCCTCCGCACTCG
GCCTCGAACTGCTACGACCTCAACCGCTCATACAACCGGATTGGAACATG
ACGTGTGGCACGGGCTGTCTGTGGTGGATTCGGGAGATGATGATGACGGC
CAGGTCGTGGAGGATATGAACCATTTTCCAGAGCCTGTCCCTAGGCGCCG
TGAAGCAAAGAGCTTCTCTAGCTTACGCCATCCCGTGGACGGTCTGCGAG
CTCTGGGTCGTCGCCTCTCGGTGACGCTCCGCAACAAGTCGTCCAGGCAT
TCTGTTCATCCTCAACCAGAAACCATGAGAAATTCCTGGTGCAATGAAAC
TAGCATTAATCGTCGACCATCCCTGGAAAGCATCTCCGCGCTGCACGGTT
TCTACGCCCATGCTGGCGCCCCTGTTCCTGGAAATGGCCTGGAGCCACCT
GTTTTCTCGAATGACATTTATGCGGGAGCGGCAGCTCGCGCTGCAGCTGC
AGCTCAGAATGAGCTGGCAAGAGCTCTGCGGGACAGTATCAAGCTCTCGG
ATGCGAGATTGACTCAAGACTCGGAAAGTGGCATTGGAATCGATCTACGC
GATCGCTCAGAGCTATCTGACCCAGCCCTGGCTATAGTACGGATTGATCC
TGTTGGCTGCCTTCCTCCTGAGGTCATGTCACAAGTGTTCTCCTACCTCG
ATCCCGAGTCCCTTATGCAGTCTGAGCTGGTTTCTCGTGCTTGGAGTGAG
CAGGCATCCTCCCGGCACATCTGGCGGCACGTGTTCCGCCATACTTACGG
ACAACACCCTAGCGGGCTCCCTTTCAAGAAGAGACAATCTGCTGGTTTGG
GTAAGACTCATCCCAAGCAGGATTGGAAGCGGATGTTCCTGGTTCGCCGT
GCTTTGGAACATCGGTGGAAGGAAGGAAAGGCCGCTGCTATCTACCTTCA
TGGCCATAAGGACAGTGTCTACTGTGCGCAATTTGATGAGTAAGTTACTC
GTTGGTAAACATCTGCATATAAGCTCTTTTTAATTATACCCCAGGGACAA
AATCATCACTGGCTCTCGCGATCGAACCATTCGTGTATGGGACGCTCATT
ACCCTTGGCCATGCCGGAAGATCATTGGCCCTCCCCCGGGCGATGTCTCC
GGTATTGGTCCGGTCAATAACCCGGCGCAGCAATCAGCCGGAAAGCCGCC
CTTCTTGACCATCTGCCCCCCGCCGACGCGTTCTGCGGGGATCATGGCTC
CCATTGAGCACAGCGCAGACTATCACAGTGCTTCCATTCTCTGCCTCCAG
TTTGACGAAGAAATCATGGTCACCGGTTCGTCTGATTTTACCTGCATTGT
GTGGGATATCAAGAACGACTACAAGCCGATTCGTCGCCTTGTGGGCCATC
AGGCAGGAGTGCTGGATGTCTGCTTTGATGACCGGTACATTGTGTCCTGC
TCCAAAGACACTACAATTTGTGTGTGGGATCGGCACACAGGGGCCTTGGT
GAAGAAACTCCTTGGCCACAGAGGTCCAGTGAACGCTGTTCAGCTGCGCG
GAGATCTTGTCGTTTCTGCAAGCGGGGACGGCGTCGCCAAGCTCTGGAAC
ATCACTTCTGGCCTTTGTGTCAAGGAGTTTCCCAGCAAGGACCGTGGACT
GGCATGTGTTGAATTCAGCGATGATGCTCGAACCATTCTCACTGGCGGCA
ACGATCAAGTGATCTATCAGTTTGACGCCAATACCGGCGACATGGTCAAT
GAGCTCAAGGGCCACGCGGGCTTGGTTCGCTCCTTGCACCTCGACAGTAT
GAACCAAAGAATCGTCAGTGGTAGCTATGACATGAGTGTTAAAGTATTCG
ATGCTCAAAGTGGCGAGCTATCCATTGACCTTCCGGGCTGGACAACGAGC
TGGATGCTCAGCGTCAAGTCCGATTATCGGCGCATTGTGGCTACCAGCCA
AGACTCTCGCGCTGTCATAATGGATTTTGGATACGGACTAGATGGCATAG
ACTTGCTGAAAGAGTAATATATCTGGCTAGACATTTTGCGTTTCGCTTAT
TTGCTGGGAAAAAGTCTCGGTTTGGAGTTTTCTGGGATATTCAGGTTCGC
TTCTTGGGTTTATTAGCAGGGACATACATTGGCTAGCGATAGATGCTTAT
ACATTTGCTCAATTAATTTATTTGCTCGGAATTTTCA
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Coding sequence (CDS) from alignment at ch4:4336865..4339601+

>KJC3_005991-T1 ID=KJC3_005991-T1|Name=KJC3_005991-T1|organism=Aspergillus niger KJC3|type=CDS|length=3954bp|location=Sequence derived from alignment at ch4:4336865..4339601+ (Aspergillus niger KJC3)
ATGGCTCCACGAGACTCTAGCACTATTACGTCCCGTCGACGCCCCTCTTT
CTCCCTCCGCACTCGGCCTCGAACTGCTACGACCTCAACCGCTCATACAA
CCGGATTGGAACATGACGTGTGGCACGGGCTGTCTGTGGTGGATTCGGGA
GATGATGATGACGGCCAGGTCGTGGAGGATATGAACCATTTTCCAGAGCC
TGTCCCTAGGCGCCGTGAAGCAAAGAGCTTCTCTAGCTTACGCCATCCCG
TGGACGGTCTGCGAGCTCTGGGTCGTCGCCTCTCGGTGACGCTCCGCAAC
AAGTCGTCCAGGCATTCTGTTCATCCTCAACCAGAAACCATGAGAAATTC
CTGGTGCAATGAAACTAGCATTAATCGTCGACCATCCCTGGAAAGCATCT
CCGCGCTGCACGGTTTCTACGCCCATGCTGGCGCCCCTGTTCCTGGAAAT
GGCCTGGAGCCACCTGTTTTCTCGAATGACATTTATGCGGGAGCGGCAGC
TCGCGCTGCAGCTGCAGCTCAGAATGAGCTGGCAAGAGCTCTGCGGGACA
GTATCAAGCTCTCGGATGCGAGATTGACTCAAGACTCGGAAAGTGGCATT
GGAATCGATCTACGCGATCGCTCAGAGCTATCTGACCCAGCCCTGGCTAT
AGTACGGATTGATCCTGTTGGCTGCCTTCCTCCTGAGGTCATGTCACAAG
TGTTCTCCTACCTCGATCCCGAGTCCCTTATGCAGTCTGAGCTGGTTTCT
CGTGCTTGGAGTGAGCAGGCATCCTCCCGGCACATCTGGCGGCACGTGTT
CCGCCATACTTACGGACAACACCCTAGCGGGCTCCCTTTCAAGAAGAGAC
AATCTGCTGGTTTGGGTAAGACTCATCCCAAGCAGGATTGGAAGCGGATG
TTCCTGGTTCGCCGTGCTTTGGAACATCGGTGGAAGGAAGGAAAGGCCGC
TGCTATCTACCTTCATGGCCATAAGGACAGTGTCTACTGTGCGCAATTTG
ATGAGGACAAAATCATCACTGGCTCTCGCGATCGAACCATTCGTGTATGG
GACGCTCATTACCCTTGGCCATGCCGGAAGATCATTGGCCCTCCCCCGGG
CGATGTCTCCGGTATTGGTCCGGTCAATAACCCGGCGCAGCAATCAGCCG
GAAAGCCGCCCTTCTTGACCATCTGCCCCCCGCCGACGCGTTCTGCGGGG
ATCATGGCTCCCATTGAGCACAGCGCAGACTATCACAGTGCTTCCATTCT
CTGCCTCCAGTTTGACGAAGAAATCATGGTCACCGGTTCGTCTGATTTTA
CCTGCATTGTGTGGGATATCAAGAACGACTACAAGCCGATTCGTCGCCTT
GTGGGCCATCAGGCAGGAGTGCTGGATGTCTGCTTTGATGACCGGTACAT
TGTGTCCTGCTCCAAAGACACTACAATTTGTGTGTGGGATCGGCACACAG
GGGCCTTGGTGAAGAAACTCCTTGGCCACAGAGGTCCAGTGAACGCTGTT
CAGCTGCGCGGAGATCTTGTCGTTTCTGCAAGCGGGGACGGCGTCGCCAA
GCTCTGGAACATCACTTCTGGCCTTTGTGTCAAGGAGTTTCCCAGCAAGG
ACCGTGGACTGGCATGTGTTGAATTCAGCGATGATGCTCGAACCATTCTC
ACTGGCGGCAACGATCAAGTGATCTATCAGTTTGACGCCAATACCGGCGA
CATGGTCAATGAGCTCAAGGGCCACGCGGGCTTGGTTCGCTCCTTGCACC
TCGACAGTATGAACCAAAGAATCGTCAGTGGTAGCTATGACATGAGTGTT
AAAGTATTCGATGCTCAAAGTGGCGAGCTATCCATTGACCTTCCGGGCTG
GACAACGAGCTGGATGCTCAGCGTCAAGTCCGATTATCGGCGCATTGTGG
CTACCAGCCAAGACTCTCGCGCTGTCATAATGGATTTTGGATACGGACTA
GATGGCATAGACTTGCTGAAAGAGTAAATGGCTCCACGAGACTCTAGCAC
TATTACGTCCCGTCGACGCCCCTCTTTCTCCCTCCGCACTCGGCCTCGAA
CTGCTACGACCTCAACCGCTCATACAACCGGATTGGAACATGACGTGTGG
CACGGGCTGTCTGTGGTGGATTCGGGAGATGATGATGACGGCCAGGTCGT
GGAGGATATGAACCATTTTCCAGAGCCTGTCCCTAGGCGCCGTGAAGCAA
AGAGCTTCTCTAGCTTACGCCATCCCGTGGACGGTCTGCGAGCTCTGGGT
CGTCGCCTCTCGGTGACGCTCCGCAACAAGTCGTCCAGGCATTCTGTTCA
TCCTCAACCAGAAACCATGAGAAATTCCTGGTGCAATGAAACTAGCATTA
ATCGTCGACCATCCCTGGAAAGCATCTCCGCGCTGCACGGTTTCTACGCC
CATGCTGGCGCCCCTGTTCCTGGAAATGGCCTGGAGCCACCTGTTTTCTC
GAATGACATTTATGCGGGAGCGGCAGCTCGCGCTGCAGCTGCAGCTCAGA
ATGAGCTGGCAAGAGCTCTGCGGGACAGTATCAAGCTCTCGGATGCGAGA
TTGACTCAAGACTCGGAAAGTGGCATTGGAATCGATCTACGCGATCGCTC
AGAGCTATCTGACCCAGCCCTGGCTATAGTACGGATTGATCCTGTTGGCT
GCCTTCCTCCTGAGGTCATGTCACAAGTGTTCTCCTACCTCGATCCCGAG
TCCCTTATGCAGTCTGAGCTGGTTTCTCGTGCTTGGAGTGAGCAGGCATC
CTCCCGGCACATCTGGCGGCACGTGTTCCGCCATACTTACGGACAACACC
CTAGCGGGCTCCCTTTCAAGAAGAGACAATCTGCTGGTTTGGGTAAGACT
CATCCCAAGCAGGATTGGAAGCGGATGTTCCTGGTTCGCCGTGCTTTGGA
ACATCGGTGGAAGGAAGGAAAGGCCGCTGCTATCTACCTTCATGGCCATA
AGGACAGTGTCTACTGTGCGCAATTTGATGAGGACAAAATCATCACTGGC
TCTCGCGATCGAACCATTCGTGTATGGGACGCTCATTACCCTTGGCCATG
CCGGAAGATCATTGGCCCTCCCCCGGGCGATGTCTCCGGTATTGGTCCGG
TCAATAACCCGGCGCAGCAATCAGCCGGAAAGCCGCCCTTCTTGACCATC
TGCCCCCCGCCGACGCGTTCTGCGGGGATCATGGCTCCCATTGAGCACAG
CGCAGACTATCACAGTGCTTCCATTCTCTGCCTCCAGTTTGACGAAGAAA
TCATGGTCACCGGTTCGTCTGATTTTACCTGCATTGTGTGGGATATCAAG
AACGACTACAAGCCGATTCGTCGCCTTGTGGGCCATCAGGCAGGAGTGCT
GGATGTCTGCTTTGATGACCGGTACATTGTGTCCTGCTCCAAAGACACTA
CAATTTGTGTGTGGGATCGGCACACAGGGGCCTTGGTGAAGAAACTCCTT
GGCCACAGAGGTCCAGTGAACGCTGTTCAGCTGCGCGGAGATCTTGTCGT
TTCTGCAAGCGGGGACGGCGTCGCCAAGCTCTGGAACATCACTTCTGGCC
TTTGTGTCAAGGAGTTTCCCAGCAAGGACCGTGGACTGGCATGTGTTGAA
TTCAGCGATGATGCTCGAACCATTCTCACTGGCGGCAACGATCAAGTGAT
CTATCAGTTTGACGCCAATACCGGCGACATGGTCAATGAGCTCAAGGGCC
ACGCGGGCTTGGTTCGCTCCTTGCACCTCGACAGTATGAACCAAAGAATC
GTCAGTGGTAGCTATGACATGAGTGTTAAAGTATTCGATGCTCAAAGTGG
CGAGCTATCCATTGACCTTCCGGGCTGGACAACGAGCTGGATGCTCAGCG
TCAAGTCCGATTATCGGCGCATTGTGGCTACCAGCCAAGACTCTCGCGCT
GTCATAATGGATTTTGGATACGGACTAGATGGCATAGACTTGCTGAAAGA
GTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005991KJC3_005991Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005991-T1.utr5p1KJC3_005991-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005991-T1.exon1KJC3_005991-T1.exon1Aspergillus niger KJC3exon
KJC3_005991-T1.exon2KJC3_005991-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005991-T1.cdsKJC3_005991-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005991-T1.utr3p1KJC3_005991-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005991-T1KJC3_005991-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR001810
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
DBxrefPFAM:PF12937
DBxrefPFAM:PF00646
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4336865..4339601 +
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