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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4518493..4520373- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006053-T1 ID=KJC3_006053-T1|Name=KJC3_006053-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1881bp|location=Sequence derived from alignment at ch4:4518493..4520373- (Aspergillus niger KJC3)
ATGCGTCGTTGAGAGTTGCATCTTCATCTTTACTTTGTATTGTCTGCTGT
ATTTTCTTGCTGAGCATCAGCAACGGACCTCAGAACCCCCCATGCTTGAT
ACCGGTAGCACTAGTGCGGTCGGGTCCACCGCCATCTCCATGAGGGACCG
ACTGCTTCAGAGTATGCCAGGGCCTCAACAGGTCTTGAAAGCTATAACTG
GATCATTGGGTGTCTCGTCGCTTTCGGTTTCAGATTATAGTTCGTCCGAA
GCAACCTTCCGGCAATGTCCTTCCTCCGAAGTGAGCTGCAAGGCTCAGTA
CCATGGCCAGGATACCTGCTGCTTCAACTACCCCGGCGGACAGATGCTCC
AGACGCAATTCTGGGATGCTGATCCAGCTATTGGGCCAGCAGATTCCTGG
ACTATCCATGGACTCTGGTGGGTTTAATCCTTGTCCCTCTTTACCAGACT
TATACCTGTCACGTATTATATATTATCGCCGTCCGGTACTGACATACGTT
CCCCGCTACATAGGCCCGACCATTGCAACGGCGGCTTCGATCAGTACTGT
GACTCCGGGAGACGGTACAGCAATATCTCGTTGATCCTAGTTGATTCTGG
TCGTGGGGATCTACTAGACTATATGAGCGACTTCTGGAAGGACTTCAGGG
GCGATGATGCGAATCTCTGGGAGCATGAGTGGAACAAGCACGGCACTTGT
GTCAGCACGCTAGAGACTCACTGCTACACCGACTATTACCCACAACAAGA
GGTTGTCGACTACTTCGACCGGACAGTCGAAGTCTTTAGAACCCTGCCTA
CCTACGAGGTCTGTCTTCCTGCACTCATTGTAGAAGAACGAAACTAAACA
CACCACTCTGCAGACACTCGCCAAAGCCGGCATTACCCCCTCCTACACGC
AAACCTACACTCGCGATGAGATTGTCAATGCCCTCTCCAAGGCCCATGGT
GCCGAGGTGACAGTCCGATGTCGACACCAGGCTATCAACGAAGTATGGTA
CTACTTCAACATCGCCGGGCCACTGCAGACGGGCAAATTCGTCCCATCTG
ACCCAGGTCAGCAAACCAACCACCTCACAAGTTGCCGATACTAATGACTA
CAACAGATGGCCAAACATCCAACTGCCCCCGCAGCGGCATCCACTACATT
CCCAAGACTCCCCGAAACGGTCACGAGCCAACCAAGACATCCCGTGGACC
TGCTGAGCCGACCGCACCGAGCGCGCCCTTTTCAGGAAAAGGGAACCTAA
TGATCTCAACTAACGGTCAGAAGCGAGGCTGCATCATTAGTCACGGCGCG
TGGTTCACCTCGGGAACCTGTGCGACTTTCACGGCCACTAAGGCGTCTGG
TATGTGTTCTCCGTTGCTGCTTTCCTATTCAGGCGGGCAGTCAGTAACTG
ACGGCCCTTCTTGACACCGCAGATGACACAGTCACCCTAAAATCCAGCAA
GGGGGACTGCGGGTTCTCGCATGATGTCTTCACCTGCGGCGGATTCATCC
GGTCGCCGACTCAATTTACTGTAAGCATCTCACCCCGCCCTTTCTTCTTA
AATCCACGTGCACCCCACCAAGACACCTGATGTATATTTGTCTAATCCCT
TCCAGGTCGAAGACGGCATGCTCGCCTACAATGACAACACAACCTTCTTC
GCAGACAAGGCGCCCAAAGGGCCAACGAAGAGCAAAGTCTTCGCGACGCA
AGACGACCATCCTCTCGAGCTATCCATCACATGGAGAGAGGCTTGATACC
AATACCTTTCGCTTTCTCTCCTCAGTCATTTTACCATATACAGCATCTAA
ACGCATATAGAATCATACATGTCTCCATATATTTCCGCATTTATACAATA
CTATTTACATAGTCGAATTTACTGCACGACA back to topCoding sequence (CDS) from alignment at ch4:4518493..4520373- >KJC3_006053-T1 ID=KJC3_006053-T1|Name=KJC3_006053-T1|organism=Aspergillus niger KJC3|type=CDS|length=7776bp|location=Sequence derived from alignment at ch4:4518493..4520373- (Aspergillus niger KJC3)
GTCGAAGACGGCATGCTCGCCTACAATGACAACACAACCTTCTTCGCAGA
CAAGGCGCCCAAAGGGCCAACGAAGAGCAAAGTCTTCGCGACGCAAGACG
ACCATCCTCTCGAGCTATCCATCACATGGAGAGAGGCTTGAATGACACAG
TCACCCTAAAATCCAGCAAGGGGGACTGCGGGTTCTCGCATGATGTCTTC
ACCTGCGGCGGATTCATCCGGTCGCCGACTCAATTTACTATGGCCAAACA
TCCAACTGCCCCCGCAGCGGCATCCACTACATTCCCAAGACTCCCCGAAA
CGGTCACGAGCCAACCAAGACATCCCGTGGACCTGCTGAGCCGACCGCAC
CGAGCGCGCCCTTTTCAGGAAAAGGGAACCTAATGATCTCAACTAACGGT
CAGAAGCGAGGCTGCATCATTAGTCACGGCGCGTGGTTCACCTCGGGAAC
CTGTGCGACTTTCACGGCCACTAAGGCGTCTGACACTCGCCAAAGCCGGC
ATTACCCCCTCCTACACGCAAACCTACACTCGCGATGAGATTGTCAATGC
CCTCTCCAAGGCCCATGGTGCCGAGGTGACAGTCCGATGTCGACACCAGG
CTATCAACGAAGTATGGTACTACTTCAACATCGCCGGGCCACTGCAGACG
GGCAAATTCGTCCCATCTGACCCAGGCCCGACCATTGCAACGGCGGCTTC
GATCAGTACTGTGACTCCGGGAGACGGTACAGCAATATCTCGTTGATCCT
AGTTGATTCTGGTCGTGGGGATCTACTAGACTATATGAGCGACTTCTGGA
AGGACTTCAGGGGCGATGATGCGAATCTCTGGGAGCATGAGTGGAACAAG
CACGGCACTTGTGTCAGCACGCTAGAGACTCACTGCTACACCGACTATTA
CCCACAACAAGAGGTTGTCGACTACTTCGACCGGACAGTCGAAGTCTTTA
GAACCCTGCCTACCTACGAGATGCTTGATACCGGTAGCACTAGTGCGGTC
GGGTCCACCGCCATCTCCATGAGGGACCGACTGCTTCAGAGTATGCCAGG
GCCTCAACAGGTCTTGAAAGCTATAACTGGATCATTGGGTGTCTCGTCGC
TTTCGGTTTCAGATTATAGTTCGTCCGAAGCAACCTTCCGGCAATGTCCT
TCCTCCGAAGTGAGCTGCAAGGCTCAGTACCATGGCCAGGATACCTGCTG
CTTCAACTACCCCGGCGGACAGATGCTCCAGACGCAATTCTGGGATGCTG
ATCCAGCTATTGGGCCAGCAGATTCCTGGACTATCCATGGACTCTGGTCG
AAGACGGCATGCTCGCCTACAATGACAACACAACCTTCTTCGCAGACAAG
GCGCCCAAAGGGCCAACGAAGAGCAAAGTCTTCGCGACGCAAGACGACCA
TCCTCTCGAGCTATCCATCACATGGAGAGAGGCTTGAATGACACAGTCAC
CCTAAAATCCAGCAAGGGGGACTGCGGGTTCTCGCATGATGTCTTCACCT
GCGGCGGATTCATCCGGTCGCCGACTCAATTTACTATGGCCAAACATCCA
ACTGCCCCCGCAGCGGCATCCACTACATTCCCAAGACTCCCCGAAACGGT
CACGAGCCAACCAAGACATCCCGTGGACCTGCTGAGCCGACCGCACCGAG
CGCGCCCTTTTCAGGAAAAGGGAACCTAATGATCTCAACTAACGGTCAGA
AGCGAGGCTGCATCATTAGTCACGGCGCGTGGTTCACCTCGGGAACCTGT
GCGACTTTCACGGCCACTAAGGCGTCTGACACTCGCCAAAGCCGGCATTA
CCCCCTCCTACACGCAAACCTACACTCGCGATGAGATTGTCAATGCCCTC
TCCAAGGCCCATGGTGCCGAGGTGACAGTCCGATGTCGACACCAGGCTAT
CAACGAAGTATGGTACTACTTCAACATCGCCGGGCCACTGCAGACGGGCA
AATTCGTCCCATCTGACCCAGGCCCGACCATTGCAACGGCGGCTTCGATC
AGTACTGTGACTCCGGGAGACGGTACAGCAATATCTCGTTGATCCTAGTT
GATTCTGGTCGTGGGGATCTACTAGACTATATGAGCGACTTCTGGAAGGA
CTTCAGGGGCGATGATGCGAATCTCTGGGAGCATGAGTGGAACAAGCACG
GCACTTGTGTCAGCACGCTAGAGACTCACTGCTACACCGACTATTACCCA
CAACAAGAGGTTGTCGACTACTTCGACCGGACAGTCGAAGTCTTTAGAAC
CCTGCCTACCTACGAGATGCTTGATACCGGTAGCACTAGTGCGGTCGGGT
CCACCGCCATCTCCATGAGGGACCGACTGCTTCAGAGTATGCCAGGGCCT
CAACAGGTCTTGAAAGCTATAACTGGATCATTGGGTGTCTCGTCGCTTTC
GGTTTCAGATTATAGTTCGTCCGAAGCAACCTTCCGGCAATGTCCTTCCT
CCGAAGTGAGCTGCAAGGCTCAGTACCATGGCCAGGATACCTGCTGCTTC
AACTACCCCGGCGGACAGATGCTCCAGACGCAATTCTGGGATGCTGATCC
AGCTATTGGGCCAGCAGATTCCTGGACTATCCATGGACTCTGGTCGAAGA
CGGCATGCTCGCCTACAATGACAACACAACCTTCTTCGCAGACAAGGCGC
CCAAAGGGCCAACGAAGAGCAAAGTCTTCGCGACGCAAGACGACCATCCT
CTCGAGCTATCCATCACATGGAGAGAGGCTTGAATGACACAGTCACCCTA
AAATCCAGCAAGGGGGACTGCGGGTTCTCGCATGATGTCTTCACCTGCGG
CGGATTCATCCGGTCGCCGACTCAATTTACTATGGCCAAACATCCAACTG
CCCCCGCAGCGGCATCCACTACATTCCCAAGACTCCCCGAAACGGTCACG
AGCCAACCAAGACATCCCGTGGACCTGCTGAGCCGACCGCACCGAGCGCG
CCCTTTTCAGGAAAAGGGAACCTAATGATCTCAACTAACGGTCAGAAGCG
AGGCTGCATCATTAGTCACGGCGCGTGGTTCACCTCGGGAACCTGTGCGA
CTTTCACGGCCACTAAGGCGTCTGACACTCGCCAAAGCCGGCATTACCCC
CTCCTACACGCAAACCTACACTCGCGATGAGATTGTCAATGCCCTCTCCA
AGGCCCATGGTGCCGAGGTGACAGTCCGATGTCGACACCAGGCTATCAAC
GAAGTATGGTACTACTTCAACATCGCCGGGCCACTGCAGACGGGCAAATT
CGTCCCATCTGACCCAGGCCCGACCATTGCAACGGCGGCTTCGATCAGTA
CTGTGACTCCGGGAGACGGTACAGCAATATCTCGTTGATCCTAGTTGATT
CTGGTCGTGGGGATCTACTAGACTATATGAGCGACTTCTGGAAGGACTTC
AGGGGCGATGATGCGAATCTCTGGGAGCATGAGTGGAACAAGCACGGCAC
TTGTGTCAGCACGCTAGAGACTCACTGCTACACCGACTATTACCCACAAC
AAGAGGTTGTCGACTACTTCGACCGGACAGTCGAAGTCTTTAGAACCCTG
CCTACCTACGAGATGCTTGATACCGGTAGCACTAGTGCGGTCGGGTCCAC
CGCCATCTCCATGAGGGACCGACTGCTTCAGAGTATGCCAGGGCCTCAAC
AGGTCTTGAAAGCTATAACTGGATCATTGGGTGTCTCGTCGCTTTCGGTT
TCAGATTATAGTTCGTCCGAAGCAACCTTCCGGCAATGTCCTTCCTCCGA
AGTGAGCTGCAAGGCTCAGTACCATGGCCAGGATACCTGCTGCTTCAACT
ACCCCGGCGGACAGATGCTCCAGACGCAATTCTGGGATGCTGATCCAGCT
ATTGGGCCAGCAGATTCCTGGACTATCCATGGACTCTGGTCGAAGACGGC
ATGCTCGCCTACAATGACAACACAACCTTCTTCGCAGACAAGGCGCCCAA
AGGGCCAACGAAGAGCAAAGTCTTCGCGACGCAAGACGACCATCCTCTCG
AGCTATCCATCACATGGAGAGAGGCTTGAATGACACAGTCACCCTAAAAT
CCAGCAAGGGGGACTGCGGGTTCTCGCATGATGTCTTCACCTGCGGCGGA
TTCATCCGGTCGCCGACTCAATTTACTATGGCCAAACATCCAACTGCCCC
CGCAGCGGCATCCACTACATTCCCAAGACTCCCCGAAACGGTCACGAGCC
AACCAAGACATCCCGTGGACCTGCTGAGCCGACCGCACCGAGCGCGCCCT
TTTCAGGAAAAGGGAACCTAATGATCTCAACTAACGGTCAGAAGCGAGGC
TGCATCATTAGTCACGGCGCGTGGTTCACCTCGGGAACCTGTGCGACTTT
CACGGCCACTAAGGCGTCTGACACTCGCCAAAGCCGGCATTACCCCCTCC
TACACGCAAACCTACACTCGCGATGAGATTGTCAATGCCCTCTCCAAGGC
CCATGGTGCCGAGGTGACAGTCCGATGTCGACACCAGGCTATCAACGAAG
TATGGTACTACTTCAACATCGCCGGGCCACTGCAGACGGGCAAATTCGTC
CCATCTGACCCAGGCCCGACCATTGCAACGGCGGCTTCGATCAGTACTGT
GACTCCGGGAGACGGTACAGCAATATCTCGTTGATCCTAGTTGATTCTGG
TCGTGGGGATCTACTAGACTATATGAGCGACTTCTGGAAGGACTTCAGGG
GCGATGATGCGAATCTCTGGGAGCATGAGTGGAACAAGCACGGCACTTGT
GTCAGCACGCTAGAGACTCACTGCTACACCGACTATTACCCACAACAAGA
GGTTGTCGACTACTTCGACCGGACAGTCGAAGTCTTTAGAACCCTGCCTA
CCTACGAGATGCTTGATACCGGTAGCACTAGTGCGGTCGGGTCCACCGCC
ATCTCCATGAGGGACCGACTGCTTCAGAGTATGCCAGGGCCTCAACAGGT
CTTGAAAGCTATAACTGGATCATTGGGTGTCTCGTCGCTTTCGGTTTCAG
ATTATAGTTCGTCCGAAGCAACCTTCCGGCAATGTCCTTCCTCCGAAGTG
AGCTGCAAGGCTCAGTACCATGGCCAGGATACCTGCTGCTTCAACTACCC
CGGCGGACAGATGCTCCAGACGCAATTCTGGGATGCTGATCCAGCTATTG
GGCCAGCAGATTCCTGGACTATCCATGGACTCTGGTCGAAGACGGCATGC
TCGCCTACAATGACAACACAACCTTCTTCGCAGACAAGGCGCCCAAAGGG
CCAACGAAGAGCAAAGTCTTCGCGACGCAAGACGACCATCCTCTCGAGCT
ATCCATCACATGGAGAGAGGCTTGAATGACACAGTCACCCTAAAATCCAG
CAAGGGGGACTGCGGGTTCTCGCATGATGTCTTCACCTGCGGCGGATTCA
TCCGGTCGCCGACTCAATTTACTATGGCCAAACATCCAACTGCCCCCGCA
GCGGCATCCACTACATTCCCAAGACTCCCCGAAACGGTCACGAGCCAACC
AAGACATCCCGTGGACCTGCTGAGCCGACCGCACCGAGCGCGCCCTTTTC
AGGAAAAGGGAACCTAATGATCTCAACTAACGGTCAGAAGCGAGGCTGCA
TCATTAGTCACGGCGCGTGGTTCACCTCGGGAACCTGTGCGACTTTCACG
GCCACTAAGGCGTCTGACACTCGCCAAAGCCGGCATTACCCCCTCCTACA
CGCAAACCTACACTCGCGATGAGATTGTCAATGCCCTCTCCAAGGCCCAT
GGTGCCGAGGTGACAGTCCGATGTCGACACCAGGCTATCAACGAAGTATG
GTACTACTTCAACATCGCCGGGCCACTGCAGACGGGCAAATTCGTCCCAT
CTGACCCAGGCCCGACCATTGCAACGGCGGCTTCGATCAGTACTGTGACT
CCGGGAGACGGTACAGCAATATCTCGTTGATCCTAGTTGATTCTGGTCGT
GGGGATCTACTAGACTATATGAGCGACTTCTGGAAGGACTTCAGGGGCGA
TGATGCGAATCTCTGGGAGCATGAGTGGAACAAGCACGGCACTTGTGTCA
GCACGCTAGAGACTCACTGCTACACCGACTATTACCCACAACAAGAGGTT
GTCGACTACTTCGACCGGACAGTCGAAGTCTTTAGAACCCTGCCTACCTA
CGAGATGCTTGATACCGGTAGCACTAGTGCGGTCGGGTCCACCGCCATCT
CCATGAGGGACCGACTGCTTCAGAGTATGCCAGGGCCTCAACAGGTCTTG
AAAGCTATAACTGGATCATTGGGTGTCTCGTCGCTTTCGGTTTCAGATTA
TAGTTCGTCCGAAGCAACCTTCCGGCAATGTCCTTCCTCCGAAGTGAGCT
GCAAGGCTCAGTACCATGGCCAGGATACCTGCTGCTTCAACTACCCCGGC
GGACAGATGCTCCAGACGCAATTCTGGGATGCTGATCCAGCTATTGGGCC
AGCAGATTCCTGGACTATCCATGGACTCTGGTCGAAGACGGCATGCTCGC
CTACAATGACAACACAACCTTCTTCGCAGACAAGGCGCCCAAAGGGCCAA
CGAAGAGCAAAGTCTTCGCGACGCAAGACGACCATCCTCTCGAGCTATCC
ATCACATGGAGAGAGGCTTGAATGACACAGTCACCCTAAAATCCAGCAAG
GGGGACTGCGGGTTCTCGCATGATGTCTTCACCTGCGGCGGATTCATCCG
GTCGCCGACTCAATTTACTATGGCCAAACATCCAACTGCCCCCGCAGCGG
CATCCACTACATTCCCAAGACTCCCCGAAACGGTCACGAGCCAACCAAGA
CATCCCGTGGACCTGCTGAGCCGACCGCACCGAGCGCGCCCTTTTCAGGA
AAAGGGAACCTAATGATCTCAACTAACGGTCAGAAGCGAGGCTGCATCAT
TAGTCACGGCGCGTGGTTCACCTCGGGAACCTGTGCGACTTTCACGGCCA
CTAAGGCGTCTGACACTCGCCAAAGCCGGCATTACCCCCTCCTACACGCA
AACCTACACTCGCGATGAGATTGTCAATGCCCTCTCCAAGGCCCATGGTG
CCGAGGTGACAGTCCGATGTCGACACCAGGCTATCAACGAAGTATGGTAC
TACTTCAACATCGCCGGGCCACTGCAGACGGGCAAATTCGTCCCATCTGA
CCCAGGCCCGACCATTGCAACGGCGGCTTCGATCAGTACTGTGACTCCGG
GAGACGGTACAGCAATATCTCGTTGATCCTAGTTGATTCTGGTCGTGGGG
ATCTACTAGACTATATGAGCGACTTCTGGAAGGACTTCAGGGGCGATGAT
GCGAATCTCTGGGAGCATGAGTGGAACAAGCACGGCACTTGTGTCAGCAC
GCTAGAGACTCACTGCTACACCGACTATTACCCACAACAAGAGGTTGTCG
ACTACTTCGACCGGACAGTCGAAGTCTTTAGAACCCTGCCTACCTACGAG
ATGCTTGATACCGGTAGCACTAGTGCGGTCGGGTCCACCGCCATCTCCAT
GAGGGACCGACTGCTTCAGAGTATGCCAGGGCCTCAACAGGTCTTGAAAG
CTATAACTGGATCATTGGGTGTCTCGTCGCTTTCGGTTTCAGATTATAGT
TCGTCCGAAGCAACCTTCCGGCAATGTCCTTCCTCCGAAGTGAGCTGCAA
GGCTCAGTACCATGGCCAGGATACCTGCTGCTTCAACTACCCCGGCGGAC
AGATGCTCCAGACGCAATTCTGGGATGCTGATCCAGCTATTGGGCCAGCA
GATTCCTGGACTATCCATGGACTCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0033897 | ribonuclease T2 activity |
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006053-T1.utr3p1 | KJC3_006053-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006053-T1.utr5p1 | KJC3_006053-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR033697 |
| DBxref | InterPro:IPR018188 |
| DBxref | InterPro:IPR033130 |
| DBxref | InterPro:IPR036430 |
| DBxref | InterPro:IPR001568 |
| DBxref | PFAM:PF00445 |
| Product | ribonuclease T2-like |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4518493..4520373 - |
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