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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4658100..4659578- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006093-T1 ID=KJC3_006093-T1|Name=KJC3_006093-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1479bp|location=Sequence derived from alignment at ch4:4658100..4659578- (Aspergillus niger KJC3)
CTCATTCTCATATCCACTCTGCCTGTCCATTGAATCTGAGCACCATGGTA
AGTACACGGAATAGTAAGAGGAAAGCCGAGGCTGTCAGTACACTCCCCAT
CCACCTGCCATTCTGCATCCATCTTATACACCCTCCCCTTTCCCCCGAAT
TCTGATAGATTCCAGACCCTACTCACATGCCTGGTCTTCTCATAGGAACA
ACAAAATGCTTTACCCCAGACCGATGAAGCGCCACCTGAGCCTCAAACGA
CTGAATCATCGGGGGGTGAGCCGCCGTCTGCTGATTCGAAAAGATCGAGA
AAGAATTCAGTGCATCTGACAGCCGAGGATTACGAAGCCTATAAAAGCCA
TTGTGACCGCATGGCAATCAGCCAGGTGGGATACAATCCAAATATCAACT
CACTCAAACGCGATTATGGGACTATGCGAAGGAATATCAAACGTTGGGCT
GGAGACTATGTTCGTGAGACTACACCATCACTTTCCAAGAAACAAAAAAA
GATGATCATCCAAAGCCTTGATGGCTATTGCGTTCAAGAGTCTTGGGACA
CAATTCAATCCTTACTCGCACCCACCTGTCGTAATGACTTCCAGCTATAC
CTGGCCCAAGCAATGATCAACAAATTCATATTCACACATTTTCTGGATAA
ACCGTTCGATTTCCTAGATGGGAAACGCGATGATACCGATGAGGATGATC
GATCATTTCCTGGGCGACTTCAGTATCTCTATAACAGATACTATGAGTGT
AAGTAATTCCACTCGCTCCCCCTTAAGCTAATGGGCCATTCTTGATCTGA
CTGGCGGGGCTGTCATCCCTGGTTTTTTTCAGCAAGCCCAGTCAATGCGG
TCTGGTGGAAAATGGTCACACTTGGTCTTGCCAACCTGGAAGATGACATC
CATACGTTCAAGTCGCCTCGGGACAAACTGCCTTACACTTTCGGAGATGA
GAGCCGCAAGCGGCAGGCAGACATAGCAAGAAACCTGGCAGACCAGCTTC
TAGAGGACAGCCTGTTTCAGCTGCTTTTAGTCAAGTTGACTGATTCCCAA
AAAAGGGCTGAACGTCGTGAGCTCTTGGCGAAGATTTTCCAAGGTAGCGC
AAAAGGCTTCACCAAGCACGAGGTAATGCTTGGGGGACTGGTGAAAGTCC
ACCAACTTCCAGAGTTGAAGCAGTTCGATACTTCTACAGGAATTATGTTT
TCCGAGATTCTTTTCGACAATGATGAAAAGACTCCGCTGTACATCCCTAA
GCCTCGCGGCCGGGTAGTTCTCGTTGTTCGACCAGGGGTGTTCCGGTACG
ATACCCCCACCCAATTTGTGCCCGTCCACAATGCGCCTCTAGACATGCAG
CAACAGGACACAGGCCGCACCTCCTGGTTGCTTTGTAAGGCGGAGGTTCT
GGTGGAACAGGCGGAAGGTAGCAGCTCGTCTGACGAATATCGACCCGATC
CTGAGAACAAGGATGTTTTCTACAGCTGA back to topCoding sequence (CDS) from alignment at ch4:4658100..4659578- >KJC3_006093-T1 ID=KJC3_006093-T1|Name=KJC3_006093-T1|organism=Aspergillus niger KJC3|type=CDS|length=4668bp|location=Sequence derived from alignment at ch4:4658100..4659578- (Aspergillus niger KJC3)
CAAGCCCAGTCAATGCGGTCTGGTGGAAAATGGTCACACTTGGTCTTGCC
AACCTGGAAGATGACATCCATACGTTCAAGTCGCCTCGGGACAAACTGCC
TTACACTTTCGGAGATGAGAGCCGCAAGCGGCAGGCAGACATAGCAAGAA
ACCTGGCAGACCAGCTTCTAGAGGACAGCCTGTTTCAGCTGCTTTTAGTC
AAGTTGACTGATTCCCAAAAAAGGGCTGAACGTCGTGAGCTCTTGGCGAA
GATTTTCCAAGGTAGCGCAAAAGGCTTCACCAAGCACGAGGTAATGCTTG
GGGGACTGGTGAAAGTCCACCAACTTCCAGAGTTGAAGCAGTTCGATACT
TCTACAGGAATTATGTTTTCCGAGATTCTTTTCGACAATGATGAAAAGAC
TCCGCTGTACATCCCTAAGCCTCGCGGCCGGGTAGTTCTCGTTGTTCGAC
CAGGGGTGTTCCGGTACGATACCCCCACCCAATTTGTGCCCGTCCACAAT
GCGCCTCTAGACATGCAGCAACAGGACACAGGCCGCACCTCCTGGTTGCT
TTGTAAGGCGGAGGTTCTGGTGGAACAGGCGGAAGGTAGCAGCTCGTCTG
ACGAATATCGACCCGATCCTGAGAACAAGGATGTTTTCTACAGCTGACCT
ATAAAAGCCATTGTGACCGCATGGCAATCAGCCAGGTGGGATACAATCCA
AATATCAACTCACTCAAACGCGATTATGGGACTATGCGAAGGAATATCAA
ACGTTGGGCTGGAGACTATGTTCGTGAGACTACACCATCACTTTCCAAGA
AACAAAAAAAGATGATCATCCAAAGCCTTGATGGCTATTGCGTTCAAGAG
TCTTGGGACACAATTCAATCCTTACTCGCACCCACCTGTCGTAATGACTT
CCAGCTATACCTGGCCCAAGCAATGATCAACAAATTCATATTCACACATT
TTCTGGATAAACCGTTCGATTTCCTAGATGGGAAACGCGATGATACCGAT
GAGGATGATCGATCATTTCCTGGGCGACTTCAGTATCTCTATAACAGATA
CTATGAGTGAACAACAAAATGCTTTACCCCAGACCGATGAAGCGCCACCT
GAGCCTCAAACGACTGAATCATCGGGGGATGGTAAGTACACGGAATAGTA
AGAGGAAAGCCGAGGCTCAAGCCCAGTCAATGCGGTCTGGTGGAAAATGG
TCACACTTGGTCTTGCCAACCTGGAAGATGACATCCATACGTTCAAGTCG
CCTCGGGACAAACTGCCTTACACTTTCGGAGATGAGAGCCGCAAGCGGCA
GGCAGACATAGCAAGAAACCTGGCAGACCAGCTTCTAGAGGACAGCCTGT
TTCAGCTGCTTTTAGTCAAGTTGACTGATTCCCAAAAAAGGGCTGAACGT
CGTGAGCTCTTGGCGAAGATTTTCCAAGGTAGCGCAAAAGGCTTCACCAA
GCACGAGGTAATGCTTGGGGGACTGGTGAAAGTCCACCAACTTCCAGAGT
TGAAGCAGTTCGATACTTCTACAGGAATTATGTTTTCCGAGATTCTTTTC
GACAATGATGAAAAGACTCCGCTGTACATCCCTAAGCCTCGCGGCCGGGT
AGTTCTCGTTGTTCGACCAGGGGTGTTCCGGTACGATACCCCCACCCAAT
TTGTGCCCGTCCACAATGCGCCTCTAGACATGCAGCAACAGGACACAGGC
CGCACCTCCTGGTTGCTTTGTAAGGCGGAGGTTCTGGTGGAACAGGCGGA
AGGTAGCAGCTCGTCTGACGAATATCGACCCGATCCTGAGAACAAGGATG
TTTTCTACAGCTGACCTATAAAAGCCATTGTGACCGCATGGCAATCAGCC
AGGTGGGATACAATCCAAATATCAACTCACTCAAACGCGATTATGGGACT
ATGCGAAGGAATATCAAACGTTGGGCTGGAGACTATGTTCGTGAGACTAC
ACCATCACTTTCCAAGAAACAAAAAAAGATGATCATCCAAAGCCTTGATG
GCTATTGCGTTCAAGAGTCTTGGGACACAATTCAATCCTTACTCGCACCC
ACCTGTCGTAATGACTTCCAGCTATACCTGGCCCAAGCAATGATCAACAA
ATTCATATTCACACATTTTCTGGATAAACCGTTCGATTTCCTAGATGGGA
AACGCGATGATACCGATGAGGATGATCGATCATTTCCTGGGCGACTTCAG
TATCTCTATAACAGATACTATGAGTGAACAACAAAATGCTTTACCCCAGA
CCGATGAAGCGCCACCTGAGCCTCAAACGACTGAATCATCGGGGGATGGT
AAGTACACGGAATAGTAAGAGGAAAGCCGAGGCTCAAGCCCAGTCAATGC
GGTCTGGTGGAAAATGGTCACACTTGGTCTTGCCAACCTGGAAGATGACA
TCCATACGTTCAAGTCGCCTCGGGACAAACTGCCTTACACTTTCGGAGAT
GAGAGCCGCAAGCGGCAGGCAGACATAGCAAGAAACCTGGCAGACCAGCT
TCTAGAGGACAGCCTGTTTCAGCTGCTTTTAGTCAAGTTGACTGATTCCC
AAAAAAGGGCTGAACGTCGTGAGCTCTTGGCGAAGATTTTCCAAGGTAGC
GCAAAAGGCTTCACCAAGCACGAGGTAATGCTTGGGGGACTGGTGAAAGT
CCACCAACTTCCAGAGTTGAAGCAGTTCGATACTTCTACAGGAATTATGT
TTTCCGAGATTCTTTTCGACAATGATGAAAAGACTCCGCTGTACATCCCT
AAGCCTCGCGGCCGGGTAGTTCTCGTTGTTCGACCAGGGGTGTTCCGGTA
CGATACCCCCACCCAATTTGTGCCCGTCCACAATGCGCCTCTAGACATGC
AGCAACAGGACACAGGCCGCACCTCCTGGTTGCTTTGTAAGGCGGAGGTT
CTGGTGGAACAGGCGGAAGGTAGCAGCTCGTCTGACGAATATCGACCCGA
TCCTGAGAACAAGGATGTTTTCTACAGCTGACCTATAAAAGCCATTGTGA
CCGCATGGCAATCAGCCAGGTGGGATACAATCCAAATATCAACTCACTCA
AACGCGATTATGGGACTATGCGAAGGAATATCAAACGTTGGGCTGGAGAC
TATGTTCGTGAGACTACACCATCACTTTCCAAGAAACAAAAAAAGATGAT
CATCCAAAGCCTTGATGGCTATTGCGTTCAAGAGTCTTGGGACACAATTC
AATCCTTACTCGCACCCACCTGTCGTAATGACTTCCAGCTATACCTGGCC
CAAGCAATGATCAACAAATTCATATTCACACATTTTCTGGATAAACCGTT
CGATTTCCTAGATGGGAAACGCGATGATACCGATGAGGATGATCGATCAT
TTCCTGGGCGACTTCAGTATCTCTATAACAGATACTATGAGTGAACAACA
AAATGCTTTACCCCAGACCGATGAAGCGCCACCTGAGCCTCAAACGACTG
AATCATCGGGGGATGGTAAGTACACGGAATAGTAAGAGGAAAGCCGAGGC
TCAAGCCCAGTCAATGCGGTCTGGTGGAAAATGGTCACACTTGGTCTTGC
CAACCTGGAAGATGACATCCATACGTTCAAGTCGCCTCGGGACAAACTGC
CTTACACTTTCGGAGATGAGAGCCGCAAGCGGCAGGCAGACATAGCAAGA
AACCTGGCAGACCAGCTTCTAGAGGACAGCCTGTTTCAGCTGCTTTTAGT
CAAGTTGACTGATTCCCAAAAAAGGGCTGAACGTCGTGAGCTCTTGGCGA
AGATTTTCCAAGGTAGCGCAAAAGGCTTCACCAAGCACGAGGTAATGCTT
GGGGGACTGGTGAAAGTCCACCAACTTCCAGAGTTGAAGCAGTTCGATAC
TTCTACAGGAATTATGTTTTCCGAGATTCTTTTCGACAATGATGAAAAGA
CTCCGCTGTACATCCCTAAGCCTCGCGGCCGGGTAGTTCTCGTTGTTCGA
CCAGGGGTGTTCCGGTACGATACCCCCACCCAATTTGTGCCCGTCCACAA
TGCGCCTCTAGACATGCAGCAACAGGACACAGGCCGCACCTCCTGGTTGC
TTTGTAAGGCGGAGGTTCTGGTGGAACAGGCGGAAGGTAGCAGCTCGTCT
GACGAATATCGACCCGATCCTGAGAACAAGGATGTTTTCTACAGCTGACC
TATAAAAGCCATTGTGACCGCATGGCAATCAGCCAGGTGGGATACAATCC
AAATATCAACTCACTCAAACGCGATTATGGGACTATGCGAAGGAATATCA
AACGTTGGGCTGGAGACTATGTTCGTGAGACTACACCATCACTTTCCAAG
AAACAAAAAAAGATGATCATCCAAAGCCTTGATGGCTATTGCGTTCAAGA
GTCTTGGGACACAATTCAATCCTTACTCGCACCCACCTGTCGTAATGACT
TCCAGCTATACCTGGCCCAAGCAATGATCAACAAATTCATATTCACACAT
TTTCTGGATAAACCGTTCGATTTCCTAGATGGGAAACGCGATGATACCGA
TGAGGATGATCGATCATTTCCTGGGCGACTTCAGTATCTCTATAACAGAT
ACTATGAGTGAACAACAAAATGCTTTACCCCAGACCGATGAAGCGCCACC
TGAGCCTCAAACGACTGAATCATCGGGGGATGGTAAGTACACGGAATAGT
AAGAGGAAAGCCGAGGCT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006093-T1.utr5p1 | KJC3_006093-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4658100..4659578 - |
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