You are here

Home

KJC3_006136-T1, KJC3_006136-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006136-T1
Unique NameKJC3_006136-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4805771..4806722+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006136-T1 ID=KJC3_006136-T1|Name=KJC3_006136-T1|organism=Aspergillus niger KJC3|type=mRNA|length=952bp|location=Sequence derived from alignment at ch4:4805771..4806722+ (Aspergillus niger KJC3)
ATGAGGTCTACGTTCCGGTTGCTGGCCGGCGTGAAGCCGGCTCGCTACTT
GGAGCCTTTCGCTCCCACCGGCTTGACCGGTATCGTCACTCACCCTAGTC
CTCGCCCGACCCTGATCTTCCTCTACAAGTCCACCCTGGATAAGCTGAAG
GCCTTCCCCGAGTCTTCCGTCTACCGCCAGTCTACCGAAGCATTGACCCG
CCACCGTCTGCAGATTGTCGAGTCTACGAAGCCGCCCGGATTTGATGCTT
GGTTGGAGCGTGTGAAGAAGGCTGTCGCTGAAGAGCCCGAGCGTTTCGCC
TCCCTTCGCCGTCCTGACGGTACATATGCCGCCTGGCAGCGTGATGACGG
TTCCGACAACCCCCGCGGTGAGGAATGGAATGGAGAGAGCATCGAGCCTA
CTACCGAGGGCCCCGCTCGTACGGCAGAGGAAGAAGCTCGGTGGCACAAG
GCCATTGAGGAGTCTACCAAGCCCACTGCTGAATCAGACTTCTACACCGC
ACAGATGAAGTGGGAGAATGAGCCCGCCCTGGAGGCTGAGCAGTATGTGA
CATCATGTCTGAGCTATGCTACCGTTTTGTGGAGATGCTGATTATGTCTT
CTAGGATTGCCGAAATTGAGAGACAGATTGGCGCCGGCCTGATCGAAGAG
GTCATTGAGGTTGCTGAAGGCGAGTTGAAGGTTGTTGACGAGCTGTACAA
GACATCCGCGTAAGTCGACTGTTGACAAGTCTGTCTTTGAAGCCATAGAT
GCTAACATTAGCTTAGTTGGGAGGAGCTTTCGGAGAAGCCCAGACCCGGT
CAGTGGTCTTACTTTGAGCGCAAGACCGAGTAAGCATAGAATGTTTTCTC
ATGAAAGGAGGGTCCGAAACTAGATTCCAATCTGCTTGTAATTATTATCT
TATGGTTGTGTGAAACAAAATTCGTTGCCAATGCCAGGCCAATTTTCTTT
TA
back to top

Coding sequence (CDS) from alignment at ch4:4805771..4806722+

>KJC3_006136-T1 ID=KJC3_006136-T1|Name=KJC3_006136-T1|organism=Aspergillus niger KJC3|type=CDS|length=2142bp|location=Sequence derived from alignment at ch4:4805771..4806722+ (Aspergillus niger KJC3)
ATGAGGTCTACGTTCCGGTTGCTGGCCGGCGTGAAGCCGGCTCGCTACTT
GGAGCCTTTCGCTCCCACCGGCTTGACCGGTATCGTCACTCACCCTAGTC
CTCGCCCGACCCTGATCTTCCTCTACAAGTCCACCCTGGATAAGCTGAAG
GCCTTCCCCGAGTCTTCCGTCTACCGCCAGTCTACCGAAGCATTGACCCG
CCACCGTCTGCAGATTGTCGAGTCTACGAAGCCGCCCGGATTTGATGCTT
GGTTGGAGCGTGTGAAGAAGGCTGTCGCTGAAGAGCCCGAGCGTTTCGCC
TCCCTTCGCCGTCCTGACGGTACATATGCCGCCTGGCAGCGTGATGACGG
TTCCGACAACCCCCGCGGTGAGGAATGGAATGGAGAGAGCATCGAGCCTA
CTACCGAGGGCCCCGCTCGTACGGCAGAGGAAGAAGCTCGGTGGCACAAG
GCCATTGAGGAGTCTACCAAGCCCACTGCTGAATCAGACTTCTACACCGC
ACAGATGAAGTGGGAGAATGAGCCCGCCCTGGAGGCTGAGCAGATTGCCG
AAATTGAGAGACAGATTGGCGCCGGCCTGATCGAAGAGGTCATTGAGGTT
GCTGAAGGCGAGTTGAAGGTTGTTGACGAGCTGTACAAGACATCCGCTTG
GGAGGAGCTTTCGGAGAAGCCCAGACCCGGTCAGTGGTCTTACTTTGAGC
GCAAGACCGAGTAAATGAGGTCTACGTTCCGGTTGCTGGCCGGCGTGAAG
CCGGCTCGCTACTTGGAGCCTTTCGCTCCCACCGGCTTGACCGGTATCGT
CACTCACCCTAGTCCTCGCCCGACCCTGATCTTCCTCTACAAGTCCACCC
TGGATAAGCTGAAGGCCTTCCCCGAGTCTTCCGTCTACCGCCAGTCTACC
GAAGCATTGACCCGCCACCGTCTGCAGATTGTCGAGTCTACGAAGCCGCC
CGGATTTGATGCTTGGTTGGAGCGTGTGAAGAAGGCTGTCGCTGAAGAGC
CCGAGCGTTTCGCCTCCCTTCGCCGTCCTGACGGTACATATGCCGCCTGG
CAGCGTGATGACGGTTCCGACAACCCCCGCGGTGAGGAATGGAATGGAGA
GAGCATCGAGCCTACTACCGAGGGCCCCGCTCGTACGGCAGAGGAAGAAG
CTCGGTGGCACAAGGCCATTGAGGAGTCTACCAAGCCCACTGCTGAATCA
GACTTCTACACCGCACAGATGAAGTGGGAGAATGAGCCCGCCCTGGAGGC
TGAGCAGATTGCCGAAATTGAGAGACAGATTGGCGCCGGCCTGATCGAAG
AGGTCATTGAGGTTGCTGAAGGCGAGTTGAAGGTTGTTGACGAGCTGTAC
AAGACATCCGCTTGGGAGGAGCTTTCGGAGAAGCCCAGACCCGGTCAGTG
GTCTTACTTTGAGCGCAAGACCGAGTAAATGAGGTCTACGTTCCGGTTGC
TGGCCGGCGTGAAGCCGGCTCGCTACTTGGAGCCTTTCGCTCCCACCGGC
TTGACCGGTATCGTCACTCACCCTAGTCCTCGCCCGACCCTGATCTTCCT
CTACAAGTCCACCCTGGATAAGCTGAAGGCCTTCCCCGAGTCTTCCGTCT
ACCGCCAGTCTACCGAAGCATTGACCCGCCACCGTCTGCAGATTGTCGAG
TCTACGAAGCCGCCCGGATTTGATGCTTGGTTGGAGCGTGTGAAGAAGGC
TGTCGCTGAAGAGCCCGAGCGTTTCGCCTCCCTTCGCCGTCCTGACGGTA
CATATGCCGCCTGGCAGCGTGATGACGGTTCCGACAACCCCCGCGGTGAG
GAATGGAATGGAGAGAGCATCGAGCCTACTACCGAGGGCCCCGCTCGTAC
GGCAGAGGAAGAAGCTCGGTGGCACAAGGCCATTGAGGAGTCTACCAAGC
CCACTGCTGAATCAGACTTCTACACCGCACAGATGAAGTGGGAGAATGAG
CCCGCCCTGGAGGCTGAGCAGATTGCCGAAATTGAGAGACAGATTGGCGC
CGGCCTGATCGAAGAGGTCATTGAGGTTGCTGAAGGCGAGTTGAAGGTTG
TTGACGAGCTGTACAAGACATCCGCTTGGGAGGAGCTTTCGGAGAAGCCC
AGACCCGGTCAGTGGTCTTACTTTGAGCGCAAGACCGAGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0022904respiratory electron transport chain
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006136KJC3_006136Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006136-T1.exon1KJC3_006136-T1.exon1Aspergillus niger KJC3exon
KJC3_006136-T1.exon2KJC3_006136-T1.exon2Aspergillus niger KJC3exon
KJC3_006136-T1.exon3KJC3_006136-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006136-T1.cdsKJC3_006136-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006136-T1.utr3p1KJC3_006136-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006136-T1KJC3_006136-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR006806
DBxrefPFAM:PF04716
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4805771..4806722 +
Powered by Drupal