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KJC3_006139-T1, KJC3_006139-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006139-T1
Unique NameKJC3_006139-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4814306..4816661+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006139-T1 ID=KJC3_006139-T1|Name=KJC3_006139-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2356bp|location=Sequence derived from alignment at ch4:4814306..4816661+ (Aspergillus niger KJC3)
ATCTTGGTCACGCTGAGGCGGTGCATCCCGGGATCGCAGTCTAGTCCCGA
TCGAGCAATCACCAAGTGCACTAGCCCCAGAGCTCAGCCACCGCCCACCC
CCAGAACCTCAAGTCATCCGTCCGCCGATACGCGACCAGTCTCATATTCA
CTGCGAACTGCTGCTGTCACAACCCTCCCGCCATCCCCCAGAAACCTTGT
TGCTATTACGCTTCTTGTCTGTGCTGAATCGACTATCTTGGGACCAACCT
GACGTGAACCCTCAAGGTTACTCCACCCTGGTTTCCCCGGCATTTCTCCC
CCCCCGCTCATCGACTGCGGAGACGTACATCCCTTTGCGCTACCGACGTT
CTCCGGACCACCATCTTCATCCCCGACGCGCATCACTCTTTTTCCTTTAA
CTAAAAACTGCCCTCTCATTTTACTGGAGGGCGTGTCGGTGTGGTCGAAA
CGGATCCGGGAACATTGGAGGATGAAAGGGACCCGCGACCGATGGGTGTA
ATACGGAAGAAGACCGCCTCGCGCGGCACTGAAGCGGGCACCAAGTATCA
CTGTGATATTTGCTCGGTTGATGTGACTTCGACGGTATAGTCTGCGATCT
GTGTCCCAAGGACTTTCGCCTCTTGTCGGTCTTAAACCTAACTTATCGGT
CTCTTTCTAGGTTCGCGTATCTTGCGCCCATCCCGCCTGCCACGAATACG
ATCTCTGCGTCCCCTGTTTCGCTGCCGGAGAGAAATCCAAGAACCATGAC
CCGTCGACACATCCGTTCCAGGTGATCGAACAGAACTCGGTCCCGATCTT
CGAGGAAGACTGGGGTGCGGACGAGGAGCTCCTGCTGCTGGAAGGCGCCG
AGATCTACGGACTGGGCTCATGGGCGGACATTGCAGACCACATTGGCGGT
TACCGCACCAAGGAGGAGGTCCGCGACCACTACATCAGCGCCTATATCGA
TAGTCCAAACTTCCCGTTACCGGAACGCGCCGATCCGGATGACAAGCGCC
TCTCGGAGGCCATTTCGAAGGAAGAATTCCAGGCGCGGAAGAAACGCCGC
ATTGAGGAGCGCAAAGAAGCGGCCAAGGCAGCTCCCCCCACAACACCGAA
GCAGAAGCCTACGGCCAGTGTACCGGCTTGTCACGAAGTGCAGGGTTACA
TGCCGGGTCGGTTGGAGTTCGAGACAGAGTTTATGAACGAAGCCGAGGAA
GCGGTACAGCATATGACATTTGAGCCTGGCGCGGGCGAGACAGCGAACGG
CGAGACGGACGCGGAAATGGAACTGAAAATGACCGTAGTGGATATCTATA
ACTCACGGCTTACGGCGCGCACGGAGCGCAAGAAGATCCTTTTCGAGCAC
AATCTCCTCGAGTACCGTAAAAACACGGCGCTGGAGAAGAAGCGCACGAA
AGAGGAGCGCGATCTGCTGAACAAGGCGAAGCCGTTTGCCCGGATGATGA
ACCACGATGATTTCGAAGAGTTCAACAAGGGTCTTGAGTACGAGCACAAC
CTGCGGCTAGCCATCACGCAGCTCCAGGAATGGCGCCAGATGGGAATTGG
CGATCTCAAGGGTGGAGAGAAATACGAACAGGAGAAGCAACAGCGGGCAC
AGCGGCTGATGCCGCAGGGCTCATTCGATCGGTTCGCCAGCACGCGACCG
ACGAAGCAGTCGCAGCAACCAGAACAGCCATCGGCCGCGAGTCAGCTGAC
GACCCCGGAGCTCCCTCTCCGGTTACAAAAGGCGTCTGGGGCGCCTAAGG
CACCAGAGCCTCCCAACCCGCCGATGAATGATTTTGATCGGGCGTTTGCC
GCCACCAATGGCGACGGGATCAGCACGCCGCAGCCAGTGAAGACCAAGTT
CGTGATCCAGCCACTAAACGGAGTGATTCCGTGGAAACTGGAGAACGAGG
GAGCACCGGATTTGCACCTGCTGACAAAGGAGGAAGTCGAGGTGTGCAAT
GTGCTGCACATGCAGCCCAAGCCATACCTGGTAATTAAGGAGACGTTATT
GAAAGAGGCGATGAAGCAGGGCGGCAGTTTAAAGAAGAAGGACGCGCGAG
CTATTTGCAAGGTCAGTCGCCTTTCCCCCCCCCCTTCTGCCAGCAACAGG
AGACGTATGGGTGTCTGACAAAGATTTCTACAGGTCGACAGTACCAAGAC
GAGTCGGATCTACGATTTCATGGTACACAGCGGCTGGATCAACAAGAGCT
GAGCGTTTGATTTGCATGAGCAGGATACCACGTGGTTCTGTGTAAGGAGT
TGCGGCGTTGGAGGTAGATGATACGATTTCTGGGCTTGATTAAGTAGATA
GACATATATGTTTATCTATACAAGGGACACGTCTAATGTTCTATCTATAC
TATGGA
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Coding sequence (CDS) from alignment at ch4:4814306..4816661+

>KJC3_006139-T1 ID=KJC3_006139-T1|Name=KJC3_006139-T1|organism=Aspergillus niger KJC3|type=CDS|length=4689bp|location=Sequence derived from alignment at ch4:4814306..4816661+ (Aspergillus niger KJC3)
ATGGGTGTAATACGGAAGAAGACCGCCTCGCGCGGCACTGAAGCGGGCAC
CAAGTATCACTGTGATATTTGCTCGGTTGATGTGACTTCGACGGTTCGCG
TATCTTGCGCCCATCCCGCCTGCCACGAATACGATCTCTGCGTCCCCTGT
TTCGCTGCCGGAGAGAAATCCAAGAACCATGACCCGTCGACACATCCGTT
CCAGGTGATCGAACAGAACTCGGTCCCGATCTTCGAGGAAGACTGGGGTG
CGGACGAGGAGCTCCTGCTGCTGGAAGGCGCCGAGATCTACGGACTGGGC
TCATGGGCGGACATTGCAGACCACATTGGCGGTTACCGCACCAAGGAGGA
GGTCCGCGACCACTACATCAGCGCCTATATCGATAGTCCAAACTTCCCGT
TACCGGAACGCGCCGATCCGGATGACAAGCGCCTCTCGGAGGCCATTTCG
AAGGAAGAATTCCAGGCGCGGAAGAAACGCCGCATTGAGGAGCGCAAAGA
AGCGGCCAAGGCAGCTCCCCCCACAACACCGAAGCAGAAGCCTACGGCCA
GTGTACCGGCTTGTCACGAAGTGCAGGGTTACATGCCGGGTCGGTTGGAG
TTCGAGACAGAGTTTATGAACGAAGCCGAGGAAGCGGTACAGCATATGAC
ATTTGAGCCTGGCGCGGGCGAGACAGCGAACGGCGAGACGGACGCGGAAA
TGGAACTGAAAATGACCGTAGTGGATATCTATAACTCACGGCTTACGGCG
CGCACGGAGCGCAAGAAGATCCTTTTCGAGCACAATCTCCTCGAGTACCG
TAAAAACACGGCGCTGGAGAAGAAGCGCACGAAAGAGGAGCGCGATCTGC
TGAACAAGGCGAAGCCGTTTGCCCGGATGATGAACCACGATGATTTCGAA
GAGTTCAACAAGGGTCTTGAGTACGAGCACAACCTGCGGCTAGCCATCAC
GCAGCTCCAGGAATGGCGCCAGATGGGAATTGGCGATCTCAAGGGTGGAG
AGAAATACGAACAGGAGAAGCAACAGCGGGCACAGCGGCTGATGCCGCAG
GGCTCATTCGATCGGTTCGCCAGCACGCGACCGACGAAGCAGTCGCAGCA
ACCAGAACAGCCATCGGCCGCGAGTCAGCTGACGACCCCGGAGCTCCCTC
TCCGGTTACAAAAGGCGTCTGGGGCGCCTAAGGCACCAGAGCCTCCCAAC
CCGCCGATGAATGATTTTGATCGGGCGTTTGCCGCCACCAATGGCGACGG
GATCAGCACGCCGCAGCCAGTGAAGACCAAGTTCGTGATCCAGCCACTAA
ACGGAGTGATTCCGTGGAAACTGGAGAACGAGGGAGCACCGGATTTGCAC
CTGCTGACAAAGGAGGAAGTCGAGGTGTGCAATGTGCTGCACATGCAGCC
CAAGCCATACCTGGTAATTAAGGAGACGTTATTGAAAGAGGCGATGAAGC
AGGGCGGCAGTTTAAAGAAGAAGGACGCGCGAGCTATTTGCAAGGTCGAC
AGTACCAAGACGAGTCGGATCTACGATTTCATGGTACACAGCGGCTGGAT
CAACAAGAGCTGAATGGGTGTAATACGGAAGAAGACCGCCTCGCGCGGCA
CTGAAGCGGGCACCAAGTATCACTGTGATATTTGCTCGGTTGATGTGACT
TCGACGGTTCGCGTATCTTGCGCCCATCCCGCCTGCCACGAATACGATCT
CTGCGTCCCCTGTTTCGCTGCCGGAGAGAAATCCAAGAACCATGACCCGT
CGACACATCCGTTCCAGGTGATCGAACAGAACTCGGTCCCGATCTTCGAG
GAAGACTGGGGTGCGGACGAGGAGCTCCTGCTGCTGGAAGGCGCCGAGAT
CTACGGACTGGGCTCATGGGCGGACATTGCAGACCACATTGGCGGTTACC
GCACCAAGGAGGAGGTCCGCGACCACTACATCAGCGCCTATATCGATAGT
CCAAACTTCCCGTTACCGGAACGCGCCGATCCGGATGACAAGCGCCTCTC
GGAGGCCATTTCGAAGGAAGAATTCCAGGCGCGGAAGAAACGCCGCATTG
AGGAGCGCAAAGAAGCGGCCAAGGCAGCTCCCCCCACAACACCGAAGCAG
AAGCCTACGGCCAGTGTACCGGCTTGTCACGAAGTGCAGGGTTACATGCC
GGGTCGGTTGGAGTTCGAGACAGAGTTTATGAACGAAGCCGAGGAAGCGG
TACAGCATATGACATTTGAGCCTGGCGCGGGCGAGACAGCGAACGGCGAG
ACGGACGCGGAAATGGAACTGAAAATGACCGTAGTGGATATCTATAACTC
ACGGCTTACGGCGCGCACGGAGCGCAAGAAGATCCTTTTCGAGCACAATC
TCCTCGAGTACCGTAAAAACACGGCGCTGGAGAAGAAGCGCACGAAAGAG
GAGCGCGATCTGCTGAACAAGGCGAAGCCGTTTGCCCGGATGATGAACCA
CGATGATTTCGAAGAGTTCAACAAGGGTCTTGAGTACGAGCACAACCTGC
GGCTAGCCATCACGCAGCTCCAGGAATGGCGCCAGATGGGAATTGGCGAT
CTCAAGGGTGGAGAGAAATACGAACAGGAGAAGCAACAGCGGGCACAGCG
GCTGATGCCGCAGGGCTCATTCGATCGGTTCGCCAGCACGCGACCGACGA
AGCAGTCGCAGCAACCAGAACAGCCATCGGCCGCGAGTCAGCTGACGACC
CCGGAGCTCCCTCTCCGGTTACAAAAGGCGTCTGGGGCGCCTAAGGCACC
AGAGCCTCCCAACCCGCCGATGAATGATTTTGATCGGGCGTTTGCCGCCA
CCAATGGCGACGGGATCAGCACGCCGCAGCCAGTGAAGACCAAGTTCGTG
ATCCAGCCACTAAACGGAGTGATTCCGTGGAAACTGGAGAACGAGGGAGC
ACCGGATTTGCACCTGCTGACAAAGGAGGAAGTCGAGGTGTGCAATGTGC
TGCACATGCAGCCCAAGCCATACCTGGTAATTAAGGAGACGTTATTGAAA
GAGGCGATGAAGCAGGGCGGCAGTTTAAAGAAGAAGGACGCGCGAGCTAT
TTGCAAGGTCGACAGTACCAAGACGAGTCGGATCTACGATTTCATGGTAC
ACAGCGGCTGGATCAACAAGAGCTGAATGGGTGTAATACGGAAGAAGACC
GCCTCGCGCGGCACTGAAGCGGGCACCAAGTATCACTGTGATATTTGCTC
GGTTGATGTGACTTCGACGGTTCGCGTATCTTGCGCCCATCCCGCCTGCC
ACGAATACGATCTCTGCGTCCCCTGTTTCGCTGCCGGAGAGAAATCCAAG
AACCATGACCCGTCGACACATCCGTTCCAGGTGATCGAACAGAACTCGGT
CCCGATCTTCGAGGAAGACTGGGGTGCGGACGAGGAGCTCCTGCTGCTGG
AAGGCGCCGAGATCTACGGACTGGGCTCATGGGCGGACATTGCAGACCAC
ATTGGCGGTTACCGCACCAAGGAGGAGGTCCGCGACCACTACATCAGCGC
CTATATCGATAGTCCAAACTTCCCGTTACCGGAACGCGCCGATCCGGATG
ACAAGCGCCTCTCGGAGGCCATTTCGAAGGAAGAATTCCAGGCGCGGAAG
AAACGCCGCATTGAGGAGCGCAAAGAAGCGGCCAAGGCAGCTCCCCCCAC
AACACCGAAGCAGAAGCCTACGGCCAGTGTACCGGCTTGTCACGAAGTGC
AGGGTTACATGCCGGGTCGGTTGGAGTTCGAGACAGAGTTTATGAACGAA
GCCGAGGAAGCGGTACAGCATATGACATTTGAGCCTGGCGCGGGCGAGAC
AGCGAACGGCGAGACGGACGCGGAAATGGAACTGAAAATGACCGTAGTGG
ATATCTATAACTCACGGCTTACGGCGCGCACGGAGCGCAAGAAGATCCTT
TTCGAGCACAATCTCCTCGAGTACCGTAAAAACACGGCGCTGGAGAAGAA
GCGCACGAAAGAGGAGCGCGATCTGCTGAACAAGGCGAAGCCGTTTGCCC
GGATGATGAACCACGATGATTTCGAAGAGTTCAACAAGGGTCTTGAGTAC
GAGCACAACCTGCGGCTAGCCATCACGCAGCTCCAGGAATGGCGCCAGAT
GGGAATTGGCGATCTCAAGGGTGGAGAGAAATACGAACAGGAGAAGCAAC
AGCGGGCACAGCGGCTGATGCCGCAGGGCTCATTCGATCGGTTCGCCAGC
ACGCGACCGACGAAGCAGTCGCAGCAACCAGAACAGCCATCGGCCGCGAG
TCAGCTGACGACCCCGGAGCTCCCTCTCCGGTTACAAAAGGCGTCTGGGG
CGCCTAAGGCACCAGAGCCTCCCAACCCGCCGATGAATGATTTTGATCGG
GCGTTTGCCGCCACCAATGGCGACGGGATCAGCACGCCGCAGCCAGTGAA
GACCAAGTTCGTGATCCAGCCACTAAACGGAGTGATTCCGTGGAAACTGG
AGAACGAGGGAGCACCGGATTTGCACCTGCTGACAAAGGAGGAAGTCGAG
GTGTGCAATGTGCTGCACATGCAGCCCAAGCCATACCTGGTAATTAAGGA
GACGTTATTGAAAGAGGCGATGAAGCAGGGCGGCAGTTTAAAGAAGAAGG
ACGCGCGAGCTATTTGCAAGGTCGACAGTACCAAGACGAGTCGGATCTAC
GATTTCATGGTACACAGCGGCTGGATCAACAAGAGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
GO:0035065regulation of histone acetylation
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003713transcription coactivator activity
GO:0005515protein binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006139KJC3_006139Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006139-T1KJC3_006139-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006139-T1.utr5p1KJC3_006139-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006139-T1.exon1KJC3_006139-T1.exon1Aspergillus niger KJC3exon
KJC3_006139-T1.exon2KJC3_006139-T1.exon2Aspergillus niger KJC3exon
KJC3_006139-T1.exon3KJC3_006139-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006139-T1.cdsKJC3_006139-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006139-T1.utr3p1KJC3_006139-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR041983
DBxrefInterPro:IPR017884
DBxrefInterPro:IPR043145
DBxrefInterPro:IPR016827
DBxrefInterPro:IPR007526
DBxrefInterPro:IPR001005
DBxrefInterPro:IPR000433
DBxrefPFAM:PF00569
DBxrefPFAM:PF04433
DBxrefPFAM:PF00249
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4814306..4816661 +
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