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KJC3_006142-T1, KJC3_006142-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006142-T1
Unique NameKJC3_006142-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4820765..4821715-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006142-T1 ID=KJC3_006142-T1|Name=KJC3_006142-T1|organism=Aspergillus niger KJC3|type=mRNA|length=951bp|location=Sequence derived from alignment at ch4:4820765..4821715- (Aspergillus niger KJC3)
ATGGGTCGCTTGGTGATTTACTTCCCCACGATAACAGCGTTTATCGCTTT
TATCCTCACCTTATTATGTCTCTTCGCAGGTACGCAATTGACGGTGCTAC
CGGGTGTCGATATATTCACGGTTGGTCTATCTGGTTCCGGGTTAATAGTG
TCTGGTCGGTTAGCTGAGATGTTACAATATAGGTTCTTTCTTCAGAACAG
AGTCGAAATACGGGGATACATGACTTCTACTCCATCTATGTGATGTCGTA
TTGCGAAGGAGATCTCGTGGCAGGCAACAGGCGCTTTTCAAATTGCTCCA
AAGCCGCATTGCCCTTTGCCTTTGATCCTTCTGTGGTGCTGTCGAAAGAA
ACCGGTAACACCACTTCACTTTCGAACCTGGGATGGCCCGATTCCGTTAC
AGATGATTTTCATGCATTCAGCATGACCAGCCGGAGTATAGGGATTCTCT
ACTGCATCGGAGCCGGGGCTGCTGGCTTGGCGATAGTGGGCAGATTGTAT
TGGCTGGTTCGGCGCGGACCACGGCAGTCCGTGATGGAAGTAGCGGCATT
ACTGGTAAAGATACCTCCCCCGACCTCTGATTGGGATGATCCCAGCACTA
ACCACGTGCTAGTTGGGGTTCATCATGCTCGGAATTTCCTCGATTATTGC
GACGGTTATCGCGTTTCAATTTGTCGATCTGGTCAATGACCATGGCCGCG
ATATGGGGGTGAGTGCCGAGTACGGACCCCAATTTTTGGGGATGACCTGG
GCGGCCACGGGGTTGATGCTGGCGGGAGGCATCACCAGTTTATTGACGGT
GCTGGTCGACCGGAGCCGAGCAGAGACAGGCACCCTTGCAGGTGACTGTG
ATGATCAAGCCAAGTCCCTCATACACTCGGACTTTGAATCGGTCAAGTCC
AGTGCGGAACCATCTCCAGGGGTGGAGACAGAAAAGGAGGGAAATCAGTG
A
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Coding sequence (CDS) from alignment at ch4:4820765..4821715-

>KJC3_006142-T1 ID=KJC3_006142-T1|Name=KJC3_006142-T1|organism=Aspergillus niger KJC3|type=CDS|length=2493bp|location=Sequence derived from alignment at ch4:4820765..4821715- (Aspergillus niger KJC3)
TTGGGGTTCATCATGCTCGGAATTTCCTCGATTATTGCGACGGTTATCGC
GTTTCAATTTGTCGATCTGGTCAATGACCATGGCCGCGATATGGGGGTGA
GTGCCGAGTACGGACCCCAATTTTTGGGGATGACCTGGGCGGCCACGGGG
TTGATGCTGGCGGGAGGCATCACCAGTTTATTGACGGTGCTGGTCGACCG
GAGCCGAGCAGAGACAGGCACCCTTGCAGGTGACTGTGATGATCAAGCCA
AGTCCCTCATACACTCGGACTTTGAATCGGTCAAGTCCAGTGCGGAACCA
TCTCCAGGGGTGGAGACAGAAAAGGAGGGAAATCAGTGAGTTCTTTCTTC
AGAACAGAGTCGAAATACGGGGATACATGACTTCTACTCCATCTATGTGA
TGTCGTATTGCGAAGGAGATCTCGTGGCAGGCAACAGGCGCTTTTCAAAT
TGCTCCAAAGCCGCATTGCCCTTTGCCTTTGATCCTTCTGTGGTGCTGTC
GAAAGAAACCGGTAACACCACTTCACTTTCGAACCTGGGATGGCCCGATT
CCGTTACAGATGATTTTCATGCATTCAGCATGACCAGCCGGAGTATAGGG
ATTCTCTACTGCATCGGAGCCGGGGCTGCTGGCTTGGCGATAGTGGGCAG
ATTGTATTGGCTGGTTCGGCGCGGACCACGGCAGTCCGTGATGGAAGTAG
CGGCATTACTGATGGGTCGCTTGGTGATTTACTTCCCCACGATAACAGCG
TTTATCGCTTTTATCCTCACCTTATTATGTCTCTTCGCAGGTACGCAATT
GACGGTGCTACCGGGTGTCGATATATTCACGTTGGGGTTCATCATGCTCG
GAATTTCCTCGATTATTGCGACGGTTATCGCGTTTCAATTTGTCGATCTG
GTCAATGACCATGGCCGCGATATGGGGGTGAGTGCCGAGTACGGACCCCA
ATTTTTGGGGATGACCTGGGCGGCCACGGGGTTGATGCTGGCGGGAGGCA
TCACCAGTTTATTGACGGTGCTGGTCGACCGGAGCCGAGCAGAGACAGGC
ACCCTTGCAGGTGACTGTGATGATCAAGCCAAGTCCCTCATACACTCGGA
CTTTGAATCGGTCAAGTCCAGTGCGGAACCATCTCCAGGGGTGGAGACAG
AAAAGGAGGGAAATCAGTGAGTTCTTTCTTCAGAACAGAGTCGAAATACG
GGGATACATGACTTCTACTCCATCTATGTGATGTCGTATTGCGAAGGAGA
TCTCGTGGCAGGCAACAGGCGCTTTTCAAATTGCTCCAAAGCCGCATTGC
CCTTTGCCTTTGATCCTTCTGTGGTGCTGTCGAAAGAAACCGGTAACACC
ACTTCACTTTCGAACCTGGGATGGCCCGATTCCGTTACAGATGATTTTCA
TGCATTCAGCATGACCAGCCGGAGTATAGGGATTCTCTACTGCATCGGAG
CCGGGGCTGCTGGCTTGGCGATAGTGGGCAGATTGTATTGGCTGGTTCGG
CGCGGACCACGGCAGTCCGTGATGGAAGTAGCGGCATTACTGATGGGTCG
CTTGGTGATTTACTTCCCCACGATAACAGCGTTTATCGCTTTTATCCTCA
CCTTATTATGTCTCTTCGCAGGTACGCAATTGACGGTGCTACCGGGTGTC
GATATATTCACGTTGGGGTTCATCATGCTCGGAATTTCCTCGATTATTGC
GACGGTTATCGCGTTTCAATTTGTCGATCTGGTCAATGACCATGGCCGCG
ATATGGGGGTGAGTGCCGAGTACGGACCCCAATTTTTGGGGATGACCTGG
GCGGCCACGGGGTTGATGCTGGCGGGAGGCATCACCAGTTTATTGACGGT
GCTGGTCGACCGGAGCCGAGCAGAGACAGGCACCCTTGCAGGTGACTGTG
ATGATCAAGCCAAGTCCCTCATACACTCGGACTTTGAATCGGTCAAGTCC
AGTGCGGAACCATCTCCAGGGGTGGAGACAGAAAAGGAGGGAAATCAGTG
AGTTCTTTCTTCAGAACAGAGTCGAAATACGGGGATACATGACTTCTACT
CCATCTATGTGATGTCGTATTGCGAAGGAGATCTCGTGGCAGGCAACAGG
CGCTTTTCAAATTGCTCCAAAGCCGCATTGCCCTTTGCCTTTGATCCTTC
TGTGGTGCTGTCGAAAGAAACCGGTAACACCACTTCACTTTCGAACCTGG
GATGGCCCGATTCCGTTACAGATGATTTTCATGCATTCAGCATGACCAGC
CGGAGTATAGGGATTCTCTACTGCATCGGAGCCGGGGCTGCTGGCTTGGC
GATAGTGGGCAGATTGTATTGGCTGGTTCGGCGCGGACCACGGCAGTCCG
TGATGGAAGTAGCGGCATTACTGATGGGTCGCTTGGTGATTTACTTCCCC
ACGATAACAGCGTTTATCGCTTTTATCCTCACCTTATTATGTCTCTTCGC
AGGTACGCAATTGACGGTGCTACCGGGTGTCGATATATTCACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005886plasma membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006142KJC3_006142Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006142-T1KJC3_006142-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006142-T1.cdsKJC3_006142-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006142-T1.exon3KJC3_006142-T1.exon3Aspergillus niger KJC3exon
KJC3_006142-T1.exon2KJC3_006142-T1.exon2Aspergillus niger KJC3exon
KJC3_006142-T1.exon1KJC3_006142-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR009571
DBxrefPFAM:PF06687
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4820765..4821715 -
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