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KJC3_006171-T1, KJC3_006171-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006171-T1
Unique NameKJC3_006171-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4900587..4902406-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006171-T1 ID=KJC3_006171-T1|Name=KJC3_006171-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1820bp|location=Sequence derived from alignment at ch4:4900587..4902406- (Aspergillus niger KJC3)
CTGTCTACAACTTGAAATCTCGAAATCTATAGCAACGTAGCTCTTGGCTC
TAGAGCTAGAATTTTGCTTACATCTCCGACACCAGATTGTCTAAACTGGC
GCAGGAGCTCATAATAAGTGCAGCTCGGAGGCAAGAGACACTTGCTTATG
CAACAAGAGCTTGAGTAGAGGCAAATAACTAGCGACCTAGCTAACCTAGA
CAACATAATCGGAAAATGGCAGCTACAGGTGCGCCTCAGCGATGGTGAGA
CGGTTTCTTCACCCTATAGCGGCAGCTGCTCATATCACCAGGAAACATCT
ATACAGCGTCCTGACTAAGTCTGGACCCTTCAGCGATGAAGATTGGGTCC
CTGGGCAAGAGACGATAAGTGCTTTAGAGTCATCGAAAATTTTGTGCGTT
TCTACGACCGTGATAATGCCGTCATGCTCGCTAACAGAACTACAGAGTCA
TGTTAGTCAAGGCGATTCTTACTCCCTTAAAGGTTCAATAGATAATAACC
AAGCACTGCTTACAGAGGAGCTGGAGGTCTAGGATGTGAGATACTCAAGA
ACCTGGCATTATCAGGTTTCAAAGACATTCACGTCATTGACATGGGTAGG
TCCTTCCTAACTCGCAAACACAACAAATGACTAACACAGGCAGATACCAT
CGATATTTCCAACCTAAACAGACAATTTCTATTTCGCCAGTCAGACATAG
GCAAGCCCAAAGCTGAGGTTGCTGCTGCCTTTGTAGAAAGACGAGTCAAG
GGAGTTAAGATCACTCCCTATGTAGGAAAGATTCAGGACAAAGACGAAGA
TTACTACATGCAATTCAAGATCATCGTCTGTGGTCTTGATAGCATCGAAG
CCAGACGATGGATTAACTCGACCCTGGTCGGAATGGTCGATTTCGAGGAT
CCAGAAAGTCTGAAGCCGCTCATCGATGGCGGAACAGAAGGTATATTTGC
TCACTCATGCTGGAGGGGAAATAAACACATCTAACCGATAACAGGATTCA
AGGGACAGGCGCGTGTAATTCTACCCACGCTTTCCTCTTGTATCGAGTGT
CAGCTTGACATGCACGCGCCGCGACCGGCCGTCCCTCTTTGTACTATCGC
AACCATTCCGCGCCAGCCTCAACACTGCATCGAATGGGCTCATCAGATCG
CCTGGCAGGAACAGCGCAAAGATGACGCATTCGACAGTGACGACATGGAG
CACATTGGCTGGGTCTACAATGCTGCTCTGGAGCGGGCGAAGCAGTTTAA
TATCCCCGGCGTCACTTTCCAGATGACTCAGGGAGTCGTCAAAAACATTA
TTCCAGCTATTGCCTCAACCAATGCCGTGATCGCAGCCGCGACTACCTCC
GAGGCATTGAAGATTGCCACATCGTGCAACCCTTACCTTGAGAACTATAT
GATGTATGCGGGCGAAGAGGGCGTGTACACTTACACCTTCGAGGCGGAGA
AGAAGCCAGACTGCCCGGTGTGCGGAAATCTGGCACGCAAATTGACTGTG
AACCCGAATATGACGCTCGAAGAATTCATCGAAACCCTTGGAGAACGGCC
CGAGGCTCAGCTGAAGAAGCCTAGTATGAGGACGGAGGAGAAGACACTCT
ACCAACGGTTCCCGCCGCAGTTGGAGGAACAGACTCGCGCTAATCTGAAG
CTCAAGCTGAAAGACCTGATCGAAGACGGTCAGGAAATCGCAGTCAGTGA
CCCGGCGTATATCATCGACTTCCGCTTCCGACTGGCGTTTCAATAGACAG
AGGGCCCCTGAGATGGACCTGCAACTACACGTTACGAAGAATCGCTGATG
CTCTGATGATCATGTTCAAG
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Coding sequence (CDS) from alignment at ch4:4900587..4902406-

>KJC3_006171-T1 ID=KJC3_006171-T1|Name=KJC3_006171-T1|organism=Aspergillus niger KJC3|type=CDS|length=3159bp|location=Sequence derived from alignment at ch4:4900587..4902406- (Aspergillus niger KJC3)
GATTCAAGGGACAGGCGCGTGTAATTCTACCCACGCTTTCCTCTTGTATC
GAGTGTCAGCTTGACATGCACGCGCCGCGACCGGCCGTCCCTCTTTGTAC
TATCGCAACCATTCCGCGCCAGCCTCAACACTGCATCGAATGGGCTCATC
AGATCGCCTGGCAGGAACAGCGCAAAGATGACGCATTCGACAGTGACGAC
ATGGAGCACATTGGCTGGGTCTACAATGCTGCTCTGGAGCGGGCGAAGCA
GTTTAATATCCCCGGCGTCACTTTCCAGATGACTCAGGGAGTCGTCAAAA
ACATTATTCCAGCTATTGCCTCAACCAATGCCGTGATCGCAGCCGCGACT
ACCTCCGAGGCATTGAAGATTGCCACATCGTGCAACCCTTACCTTGAGAA
CTATATGATGTATGCGGGCGAAGAGGGCGTGTACACTTACACCTTCGAGG
CGGAGAAGAAGCCAGACTGCCCGGTGTGCGGAAATCTGGCACGCAAATTG
ACTGTGAACCCGAATATGACGCTCGAAGAATTCATCGAAACCCTTGGAGA
ACGGCCCGAGGCTCAGCTGAAGAAGCCTAGTATGAGGACGGAGGAGAAGA
CACTCTACCAACGGTTCCCGCCGCAGTTGGAGGAACAGACTCGCGCTAAT
CTGAAGCTCAAGCTGAAAGACCTGATCGAAGACGGTCAGGAAATCGCAGT
CAGTGACCCGGCGTATATCATCGACTTCCGCTTCCGACTGGCGTTTCAAT
AGATACCATCGATATTTCCAACCTAAACAGACAATTTCTATTTCGCCAGT
CAGACATAGGCAAGCCCAAAGCTGAGGTTGCTGCTGCCTTTGTAGAAAGA
CGAGTCAAGGGAGTTAAGATCACTCCCTATGTAGGAAAGATTCAGGACAA
AGACGAAGATTACTACATGCAATTCAAGATCATCGTCTGTGGTCTTGATA
GCATCGAAGCCAGACGATGGATTAACTCGACCCTGGTCGGAATGGTCGAT
TTCGAGGATCCAGAAAGTCTGAAGCCGCTCATCGATGGCGGAACAGAAGA
TGGGATTCAAGGGACAGGCGCGTGTAATTCTACCCACGCTTTCCTCTTGT
ATCGAGTGTCAGCTTGACATGCACGCGCCGCGACCGGCCGTCCCTCTTTG
TACTATCGCAACCATTCCGCGCCAGCCTCAACACTGCATCGAATGGGCTC
ATCAGATCGCCTGGCAGGAACAGCGCAAAGATGACGCATTCGACAGTGAC
GACATGGAGCACATTGGCTGGGTCTACAATGCTGCTCTGGAGCGGGCGAA
GCAGTTTAATATCCCCGGCGTCACTTTCCAGATGACTCAGGGAGTCGTCA
AAAACATTATTCCAGCTATTGCCTCAACCAATGCCGTGATCGCAGCCGCG
ACTACCTCCGAGGCATTGAAGATTGCCACATCGTGCAACCCTTACCTTGA
GAACTATATGATGTATGCGGGCGAAGAGGGCGTGTACACTTACACCTTCG
AGGCGGAGAAGAAGCCAGACTGCCCGGTGTGCGGAAATCTGGCACGCAAA
TTGACTGTGAACCCGAATATGACGCTCGAAGAATTCATCGAAACCCTTGG
AGAACGGCCCGAGGCTCAGCTGAAGAAGCCTAGTATGAGGACGGAGGAGA
AGACACTCTACCAACGGTTCCCGCCGCAGTTGGAGGAACAGACTCGCGCT
AATCTGAAGCTCAAGCTGAAAGACCTGATCGAAGACGGTCAGGAAATCGC
AGTCAGTGACCCGGCGTATATCATCGACTTCCGCTTCCGACTGGCGTTTC
AATAGATACCATCGATATTTCCAACCTAAACAGACAATTTCTATTTCGCC
AGTCAGACATAGGCAAGCCCAAAGCTGAGGTTGCTGCTGCCTTTGTAGAA
AGACGAGTCAAGGGAGTTAAGATCACTCCCTATGTAGGAAAGATTCAGGA
CAAAGACGAAGATTACTACATGCAATTCAAGATCATCGTCTGTGGTCTTG
ATAGCATCGAAGCCAGACGATGGATTAACTCGACCCTGGTCGGAATGGTC
GATTTCGAGGATCCAGAAAGTCTGAAGCCGCTCATCGATGGCGGAACAGA
AGATGGGATTCAAGGGACAGGCGCGTGTAATTCTACCCACGCTTTCCTCT
TGTATCGAGTGTCAGCTTGACATGCACGCGCCGCGACCGGCCGTCCCTCT
TTGTACTATCGCAACCATTCCGCGCCAGCCTCAACACTGCATCGAATGGG
CTCATCAGATCGCCTGGCAGGAACAGCGCAAAGATGACGCATTCGACAGT
GACGACATGGAGCACATTGGCTGGGTCTACAATGCTGCTCTGGAGCGGGC
GAAGCAGTTTAATATCCCCGGCGTCACTTTCCAGATGACTCAGGGAGTCG
TCAAAAACATTATTCCAGCTATTGCCTCAACCAATGCCGTGATCGCAGCC
GCGACTACCTCCGAGGCATTGAAGATTGCCACATCGTGCAACCCTTACCT
TGAGAACTATATGATGTATGCGGGCGAAGAGGGCGTGTACACTTACACCT
TCGAGGCGGAGAAGAAGCCAGACTGCCCGGTGTGCGGAAATCTGGCACGC
AAATTGACTGTGAACCCGAATATGACGCTCGAAGAATTCATCGAAACCCT
TGGAGAACGGCCCGAGGCTCAGCTGAAGAAGCCTAGTATGAGGACGGAGG
AGAAGACACTCTACCAACGGTTCCCGCCGCAGTTGGAGGAACAGACTCGC
GCTAATCTGAAGCTCAAGCTGAAAGACCTGATCGAAGACGGTCAGGAAAT
CGCAGTCAGTGACCCGGCGTATATCATCGACTTCCGCTTCCGACTGGCGT
TTCAATAGATACCATCGATATTTCCAACCTAAACAGACAATTTCTATTTC
GCCAGTCAGACATAGGCAAGCCCAAAGCTGAGGTTGCTGCTGCCTTTGTA
GAAAGACGAGTCAAGGGAGTTAAGATCACTCCCTATGTAGGAAAGATTCA
GGACAAAGACGAAGATTACTACATGCAATTCAAGATCATCGTCTGTGGTC
TTGATAGCATCGAAGCCAGACGATGGATTAACTCGACCCTGGTCGGAATG
GTCGATTTCGAGGATCCAGAAAGTCTGAAGCCGCTCATCGATGGCGGAAC
AGAAGATGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008641ubiquitin-like modifier activating enzyme activity
GO:0019781NEDD8 activating enzyme activity
Vocabulary: Biological Process
TermDefinition
GO:0045116protein neddylation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006171KJC3_006171Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006171-T1KJC3_006171-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006171-T1.cdsKJC3_006171-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006171-T1.utr3p1KJC3_006171-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006171-T1.exon5KJC3_006171-T1.exon5Aspergillus niger KJC3exon
KJC3_006171-T1.exon4KJC3_006171-T1.exon4Aspergillus niger KJC3exon
KJC3_006171-T1.exon3KJC3_006171-T1.exon3Aspergillus niger KJC3exon
KJC3_006171-T1.exon2KJC3_006171-T1.exon2Aspergillus niger KJC3exon
KJC3_006171-T1.exon1KJC3_006171-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006171-T1.utr5p3KJC3_006171-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_006171-T1.utr5p2KJC3_006171-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006171-T1.utr5p1KJC3_006171-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035985
DBxrefInterPro:IPR000594
DBxrefInterPro:IPR023318
DBxrefInterPro:IPR014929
DBxrefPFAM:PF00899
DBxrefPFAM:PF08825
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4900587..4902406 -
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