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KJC3_006183-T1, KJC3_006183-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006183-T1
Unique NameKJC3_006183-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4964171..4964727+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006183-T1 ID=KJC3_006183-T1|Name=KJC3_006183-T1|organism=Aspergillus niger KJC3|type=mRNA|length=557bp|location=Sequence derived from alignment at ch4:4964171..4964727+ (Aspergillus niger KJC3)
ATGACTGGACGTAAGTATTTTATCCCCTTTACTTGCTTCGACTACGAGTT
TCCTCCTCGTTCCCTACTCTCGGGTCGGATGGTGGTGATGATCTTGGATG
ATCTTGATGATGCACCCCTGGCGACACGTGACCGCGTACCTGTCACGCCC
ACGCGTCGTGTCCGAGATTTCATCTGATCTTCACCCCACCCTCACATACT
CTCATTGCTTGATGAAACAAAATATCACTCAACATATACTAACATTCTCT
TACAGGCGGAAAAGGAGGCAAGGGTCTCGGCAAGGGTGGCGCCAAGCGTC
ACCGTAAGATCTTGCGTGACAACATCCAGGGTATCACCAAGCCCGCTATC
CGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTA
CGAAGAGACTCGTGGTGTTCTCAAGTCCTTCCTCGAGTCCGTCATCCGTG
ATGCCGTCACCTACACTGAGCACGCCAAGCGCAAGACCGTCACCTCCCTC
GACGTTGTCTACGCCCTCAAGCGCCAGGGCCGTACCCTGTACGGTTTCGG
TGGTTAA
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Coding sequence (CDS) from alignment at ch4:4964171..4964727+

>KJC3_006183-T1 ID=KJC3_006183-T1|Name=KJC3_006183-T1|organism=Aspergillus niger KJC3|type=CDS|length=624bp|location=Sequence derived from alignment at ch4:4964171..4964727+ (Aspergillus niger KJC3)
ATGACTGGACGCGGAAAAGGAGGCAAGGGTCTCGGCAAGGGTGGCGCCAA
GCGTCACCGTAAGATCTTGCGTGACAACATCCAGGGTATCACCAAGCCCG
CTATCCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATG
ATCTACGAAGAGACTCGTGGTGTTCTCAAGTCCTTCCTCGAGTCCGTCAT
CCGTGATGCCGTCACCTACACTGAGCACGCCAAGCGCAAGACCGTCACCT
CCCTCGACGTTGTCTACGCCCTCAAGCGCCAGGGCCGTACCCTGTACGGT
TTCGGTGGTTAAATGACTGGACGCGGAAAAGGAGGCAAGGGTCTCGGCAA
GGGTGGCGCCAAGCGTCACCGTAAGATCTTGCGTGACAACATCCAGGGTA
TCACCAAGCCCGCTATCCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGT
ATCTCCGCCATGATCTACGAAGAGACTCGTGGTGTTCTCAAGTCCTTCCT
CGAGTCCGTCATCCGTGATGCCGTCACCTACACTGAGCACGCCAAGCGCA
AGACCGTCACCTCCCTCGACGTTGTCTACGCCCTCAAGCGCCAGGGCCGT
ACCCTGTACGGTTTCGGTGGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
GO:0000786nucleosome
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006183KJC3_006183Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006183-T1.exon1KJC3_006183-T1.exon1Aspergillus niger KJC3exon
KJC3_006183-T1.exon2KJC3_006183-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006183-T1.cdsKJC3_006183-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006183-T1KJC3_006183-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR019809
DBxrefInterPro:IPR009072
DBxrefInterPro:IPR035425
DBxrefInterPro:IPR001951
DBxrefPFAM:PF02969
DBxrefPFAM:PF15511
DBxrefPFAM:PF00808
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4964171..4964727 +
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