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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4981095..4982006- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006192-T1 ID=KJC3_006192-T1|Name=KJC3_006192-T1|organism=Aspergillus niger KJC3|type=mRNA|length=912bp|location=Sequence derived from alignment at ch4:4981095..4982006- (Aspergillus niger KJC3)
ATGGCATTTATAACATCGCTCGACTCCCTTTGGGCGGCTTCGAGCCTCCA
ATTCGACAACGCCTTCCAATTTATAAAATCCCTCGCCGGCAACCATACCG
ACATTCCAAAGACAACCGAGACAATACTAGAAAGCCAGATTGGCTGGTCC
AATCCTCCAGACCCGTCCAACATGCCATTCAATATCGATTTTCAGATGAT
TTTCTCGTTGTTCTACTTCCTCATCATCTTCCTTATACCTGTCTTCCTCA
CCAACTATCTCCTCCCTGCCACGAGCCACCCCAGACGCGATCGCTTCCTG
TTCGGATGGCACCTATTCGATGCCCTCGTCCACTTCGGCATGGAAGGGCT
CTTCCTCTTCCACTGCTTCTTCAGCTACGCCCCTATCTCCCCCAGCGAGA
GCCGCGACCCCGTCTTCCTCGGCGACAAAGACCACGTTTACGGCGCCACA
TACTCCAACTCACCAACCGCCAAACTGTGGCATGAGTACGCTCAAGCAGA
CCACCGCTGGGGTGGTGCCGACCCCACCATCATCTCCATCGAGCTGATCA
CTGTGATCTTCGGCGGTATCACCGCCTCCTTGATCAGCTATTGGGTCTAC
CAGGCGTCCTGCCGGCAGCCGAGGGAGAAGGAAGCGATCAAGGGAAAGAT
GTGGTTCATGATGATTGTGCTAGCGACGGCTGAGATATACGGAGGCTTCA
TGACCTTCCTGCCGGAGATGCTGACTGGTAATACGGCGTTGGCCACTGAT
AGTTTCCTGTATTTCGTGCTGTATATTGTTATCTTCAACGGCCTCTGGGT
CGTTGTCCCTGGCTGGATTCTGTGGGAGGCGTGGAAGGAGTTCACGGGCT
CCTTCAATGTCATTAAGAAACAGCGGGACAACAGCTCCCCCAGGCACAAG
CTTGGAAGGTGA back to topCoding sequence (CDS) from alignment at ch4:4981095..4982006- >KJC3_006192-T1 ID=KJC3_006192-T1|Name=KJC3_006192-T1|organism=Aspergillus niger KJC3|type=CDS|length=912bp|location=Sequence derived from alignment at ch4:4981095..4982006- (Aspergillus niger KJC3)
ATGGCATTTATAACATCGCTCGACTCCCTTTGGGCGGCTTCGAGCCTCCA
ATTCGACAACGCCTTCCAATTTATAAAATCCCTCGCCGGCAACCATACCG
ACATTCCAAAGACAACCGAGACAATACTAGAAAGCCAGATTGGCTGGTCC
AATCCTCCAGACCCGTCCAACATGCCATTCAATATCGATTTTCAGATGAT
TTTCTCGTTGTTCTACTTCCTCATCATCTTCCTTATACCTGTCTTCCTCA
CCAACTATCTCCTCCCTGCCACGAGCCACCCCAGACGCGATCGCTTCCTG
TTCGGATGGCACCTATTCGATGCCCTCGTCCACTTCGGCATGGAAGGGCT
CTTCCTCTTCCACTGCTTCTTCAGCTACGCCCCTATCTCCCCCAGCGAGA
GCCGCGACCCCGTCTTCCTCGGCGACAAAGACCACGTTTACGGCGCCACA
TACTCCAACTCACCAACCGCCAAACTGTGGCATGAGTACGCTCAAGCAGA
CCACCGCTGGGGTGGTGCCGACCCCACCATCATCTCCATCGAGCTGATCA
CTGTGATCTTCGGCGGTATCACCGCCTCCTTGATCAGCTATTGGGTCTAC
CAGGCGTCCTGCCGGCAGCCGAGGGAGAAGGAAGCGATCAAGGGAAAGAT
GTGGTTCATGATGATTGTGCTAGCGACGGCTGAGATATACGGAGGCTTCA
TGACCTTCCTGCCGGAGATGCTGACTGGTAATACGGCGTTGGCCACTGAT
AGTTTCCTGTATTTCGTGCTGTATATTGTTATCTTCAACGGCCTCTGGGT
CGTTGTCCCTGGCTGGATTCTGTGGGAGGCGTGGAAGGAGTTCACGGGCT
CCTTCAATGTCATTAAGAAACAGCGGGACAACAGCTCCCCCAGGCACAAG
CTTGGAAGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0047750 | cholestenol delta-isomerase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016125 | sterol metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.11 |
| DBxref | InterPro:IPR033118 |
| DBxref | InterPro:IPR007905 |
| DBxref | PFAM:PF05241 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4981095..4982006 - |
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