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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5137285..5138906+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006246-T1 ID=KJC3_006246-T1|Name=KJC3_006246-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1622bp|location=Sequence derived from alignment at ch4:5137285..5138906+ (Aspergillus niger KJC3)
ATGGGCCCTCCACCAGAGAAAATGATTCCATCCGAGACGGATCAAGAGAG
TGGTGAGTATCCCACTCTGGTCGAGTTCGATGGACCAGATGATCCTCTCC
TCCCGTTCAACTGGTCCATTACGCGGAGAGTTTGGGTCACTTCAGTGGTG
GCTATACTGAATCTCATTGGAACGGTGGCCAGCAGCATATTCGAAACTGG
CAATGAGACATTCATGCAAGACTTTAACATTAGCCATGAAGTCGCTGTGC
TGGGGACGAGTTTATTCTTAGTAGTAAGTAGCCCGTTCATTCGGTCATCT
ACCTCCCTTCCCAAGTCAGTTTGTTCCAGAAACGCATGGTAGAGATTGAC
TAAATGAATTCAGGGCTACATATTCGGCTTTCTCACCTTCGGCCCTCTCT
CCGAGCGATTCGGCCGCAAATGGCCCATGTTACTAGGAATCACCCTCTCG
TCGCTCTTCGACTTGATGCCCGCCCTCGGGCACAACCTTCCCACCGTCCT
GCTTGGTCGTTTCTTTGGCGGGCTATTCGGCGTTGCGCCAGTCGCGATAT
TCGGCGGTGTGATTAGTGACTGCTGGCCAATGGCTCATCGCGGGATTGCC
ATGGCATTGGCAGTCTCACTCGTCTTCTCAGGACCTACGTTTGGTCCTGT
TTTCGGGGGGTTCATCATGTCCTCTTCGACGCTCGACTGGAGATGGAACA
TGTGGGTAGTTATCATCGTGGGACTGGGGGCGTCGCTGCTCTGCGCATTT
GTCTATCCGGAGACGTACGCACCAGTGATTCTGCGCAAGAAGGGGCAGGC
ACTTAGGAGGAAGACAGGTAATCTGGATATCAAGACCGCAGCAGATAAGG
AGGGGATTAGTCTGCAGGAGATTGCAAGGGCCTATCTGATTCGACCTTTT
TGTGGGTTATTGCCATCATCGAGGGCTATTAATGGGCCATCTAACAAGCA
AATTCAGGGCTCTTCACCACGCAACCCATCCTCGCCCTCCTCACCCTCTA
CCAATCCTTCATCTACGGCGTTCTCTTCCTCTTCTACCAAACCTACCCCG
TCGTATTCGGCGAGGACCGTGGCTGGCCCACGGCCCTCAAATACCTCCCC
CTTCTGGCCATCATCTGCGGTGTCTTCGCTGGCGCTTTCGGCATCATCAT
CCACAACCAAGTCTACTTTCGTCACCACTGCCACGCTCCCGACGGCGTCA
CCTTCATCCCCGAAGCCCGTCTCCCGCCTATGATCGTCGGCGGCATCTTG
GTCCCCATTGGGATGTTCTGGTTTGCAGGCACCGCTACGCCGGCCACCAT
CCCCTGGCCCAGTGCCATCTGTGCAAGCTTCTTGATCGGCGCCGGCATGT
ATTTGCTCTTCATTCAGGGGTTTAACTACATCGTGGATAACTATACCAGT
ATGGCGAATAGTGCCATGGGTGTTAACGGATCCATGAGGAGTATCTTTGG
GGCGGCGTTTCCTCTTTTTGCTAATCAGATGGTGGATGGGCTGGGGGTGC
AGAGGGCGACCATCGTTTTGGCGGCGATTTGTGTGGCTTTGGTGCCGGTG
CCGGTTTGCTTTTGGTATTGGGGGGATAGGATTAGGGCGTGGTCGTCTGT
GAAGGTTCCTGATAATATATGA back to topCoding sequence (CDS) from alignment at ch4:5137285..5138906+ >KJC3_006246-T1 ID=KJC3_006246-T1|Name=KJC3_006246-T1|organism=Aspergillus niger KJC3|type=CDS|length=4428bp|location=Sequence derived from alignment at ch4:5137285..5138906+ (Aspergillus niger KJC3)
ATGGGCCCTCCACCAGAGAAAATGATTCCATCCGAGACGGATCAAGAGAG
TGGTGAGTATCCCACTCTGGTCGAGTTCGATGGACCAGATGATCCTCTCC
TCCCGTTCAACTGGTCCATTACGCGGAGAGTTTGGGTCACTTCAGTGGTG
GCTATACTGAATCTCATTGGAACGGTGGCCAGCAGCATATTCGAAACTGG
CAATGAGACATTCATGCAAGACTTTAACATTAGCCATGAAGTCGCTGTGC
TGGGGACGAGTTTATTCTTAGTAGGCTACATATTCGGCTTTCTCACCTTC
GGCCCTCTCTCCGAGCGATTCGGCCGCAAATGGCCCATGTTACTAGGAAT
CACCCTCTCGTCGCTCTTCGACTTGATGCCCGCCCTCGGGCACAACCTTC
CCACCGTCCTGCTTGGTCGTTTCTTTGGCGGGCTATTCGGCGTTGCGCCA
GTCGCGATATTCGGCGGTGTGATTAGTGACTGCTGGCCAATGGCTCATCG
CGGGATTGCCATGGCATTGGCAGTCTCACTCGTCTTCTCAGGACCTACGT
TTGGTCCTGTTTTCGGGGGGTTCATCATGTCCTCTTCGACGCTCGACTGG
AGATGGAACATGTGGGTAGTTATCATCGTGGGACTGGGGGCGTCGCTGCT
CTGCGCATTTGTCTATCCGGAGACGTACGCACCAGTGATTCTGCGCAAGA
AGGGGCAGGCACTTAGGAGGAAGACAGGTAATCTGGATATCAAGACCGCA
GCAGATAAGGAGGGGATTAGTCTGCAGGAGATTGCAAGGGCCTATCTGAT
TCGACCTTTTTGGCTCTTCACCACGCAACCCATCCTCGCCCTCCTCACCC
TCTACCAATCCTTCATCTACGGCGTTCTCTTCCTCTTCTACCAAACCTAC
CCCGTCGTATTCGGCGAGGACCGTGGCTGGCCCACGGCCCTCAAATACCT
CCCCCTTCTGGCCATCATCTGCGGTGTCTTCGCTGGCGCTTTCGGCATCA
TCATCCACAACCAAGTCTACTTTCGTCACCACTGCCACGCTCCCGACGGC
GTCACCTTCATCCCCGAAGCCCGTCTCCCGCCTATGATCGTCGGCGGCAT
CTTGGTCCCCATTGGGATGTTCTGGTTTGCAGGCACCGCTACGCCGGCCA
CCATCCCCTGGCCCAGTGCCATCTGTGCAAGCTTCTTGATCGGCGCCGGC
ATGTATTTGCTCTTCATTCAGGGGTTTAACTACATCGTGGATAACTATAC
CAGTATGGCGAATAGTGCCATGGGTGTTAACGGATCCATGAGGAGTATCT
TTGGGGCGGCGTTTCCTCTTTTTGCTAATCAGATGGTGGATGGGCTGGGG
GTGCAGAGGGCGACCATCGTTTTGGCGGCGATTTGTGTGGCTTTGGTGCC
GGTGCCGGTTTGCTTTTGGTATTGGGGGGATAGGATTAGGGCGTGGTCGT
CTGTGAAGGTTCCTGATAATATATGAATGGGCCCTCCACCAGAGAAAATG
ATTCCATCCGAGACGGATCAAGAGAGTGGTGAGTATCCCACTCTGGTCGA
GTTCGATGGACCAGATGATCCTCTCCTCCCGTTCAACTGGTCCATTACGC
GGAGAGTTTGGGTCACTTCAGTGGTGGCTATACTGAATCTCATTGGAACG
GTGGCCAGCAGCATATTCGAAACTGGCAATGAGACATTCATGCAAGACTT
TAACATTAGCCATGAAGTCGCTGTGCTGGGGACGAGTTTATTCTTAGTAG
GCTACATATTCGGCTTTCTCACCTTCGGCCCTCTCTCCGAGCGATTCGGC
CGCAAATGGCCCATGTTACTAGGAATCACCCTCTCGTCGCTCTTCGACTT
GATGCCCGCCCTCGGGCACAACCTTCCCACCGTCCTGCTTGGTCGTTTCT
TTGGCGGGCTATTCGGCGTTGCGCCAGTCGCGATATTCGGCGGTGTGATT
AGTGACTGCTGGCCAATGGCTCATCGCGGGATTGCCATGGCATTGGCAGT
CTCACTCGTCTTCTCAGGACCTACGTTTGGTCCTGTTTTCGGGGGGTTCA
TCATGTCCTCTTCGACGCTCGACTGGAGATGGAACATGTGGGTAGTTATC
ATCGTGGGACTGGGGGCGTCGCTGCTCTGCGCATTTGTCTATCCGGAGAC
GTACGCACCAGTGATTCTGCGCAAGAAGGGGCAGGCACTTAGGAGGAAGA
CAGGTAATCTGGATATCAAGACCGCAGCAGATAAGGAGGGGATTAGTCTG
CAGGAGATTGCAAGGGCCTATCTGATTCGACCTTTTTGGCTCTTCACCAC
GCAACCCATCCTCGCCCTCCTCACCCTCTACCAATCCTTCATCTACGGCG
TTCTCTTCCTCTTCTACCAAACCTACCCCGTCGTATTCGGCGAGGACCGT
GGCTGGCCCACGGCCCTCAAATACCTCCCCCTTCTGGCCATCATCTGCGG
TGTCTTCGCTGGCGCTTTCGGCATCATCATCCACAACCAAGTCTACTTTC
GTCACCACTGCCACGCTCCCGACGGCGTCACCTTCATCCCCGAAGCCCGT
CTCCCGCCTATGATCGTCGGCGGCATCTTGGTCCCCATTGGGATGTTCTG
GTTTGCAGGCACCGCTACGCCGGCCACCATCCCCTGGCCCAGTGCCATCT
GTGCAAGCTTCTTGATCGGCGCCGGCATGTATTTGCTCTTCATTCAGGGG
TTTAACTACATCGTGGATAACTATACCAGTATGGCGAATAGTGCCATGGG
TGTTAACGGATCCATGAGGAGTATCTTTGGGGCGGCGTTTCCTCTTTTTG
CTAATCAGATGGTGGATGGGCTGGGGGTGCAGAGGGCGACCATCGTTTTG
GCGGCGATTTGTGTGGCTTTGGTGCCGGTGCCGGTTTGCTTTTGGTATTG
GGGGGATAGGATTAGGGCGTGGTCGTCTGTGAAGGTTCCTGATAATATAT
GAATGGGCCCTCCACCAGAGAAAATGATTCCATCCGAGACGGATCAAGAG
AGTGGTGAGTATCCCACTCTGGTCGAGTTCGATGGACCAGATGATCCTCT
CCTCCCGTTCAACTGGTCCATTACGCGGAGAGTTTGGGTCACTTCAGTGG
TGGCTATACTGAATCTCATTGGAACGGTGGCCAGCAGCATATTCGAAACT
GGCAATGAGACATTCATGCAAGACTTTAACATTAGCCATGAAGTCGCTGT
GCTGGGGACGAGTTTATTCTTAGTAGGCTACATATTCGGCTTTCTCACCT
TCGGCCCTCTCTCCGAGCGATTCGGCCGCAAATGGCCCATGTTACTAGGA
ATCACCCTCTCGTCGCTCTTCGACTTGATGCCCGCCCTCGGGCACAACCT
TCCCACCGTCCTGCTTGGTCGTTTCTTTGGCGGGCTATTCGGCGTTGCGC
CAGTCGCGATATTCGGCGGTGTGATTAGTGACTGCTGGCCAATGGCTCAT
CGCGGGATTGCCATGGCATTGGCAGTCTCACTCGTCTTCTCAGGACCTAC
GTTTGGTCCTGTTTTCGGGGGGTTCATCATGTCCTCTTCGACGCTCGACT
GGAGATGGAACATGTGGGTAGTTATCATCGTGGGACTGGGGGCGTCGCTG
CTCTGCGCATTTGTCTATCCGGAGACGTACGCACCAGTGATTCTGCGCAA
GAAGGGGCAGGCACTTAGGAGGAAGACAGGTAATCTGGATATCAAGACCG
CAGCAGATAAGGAGGGGATTAGTCTGCAGGAGATTGCAAGGGCCTATCTG
ATTCGACCTTTTTGGCTCTTCACCACGCAACCCATCCTCGCCCTCCTCAC
CCTCTACCAATCCTTCATCTACGGCGTTCTCTTCCTCTTCTACCAAACCT
ACCCCGTCGTATTCGGCGAGGACCGTGGCTGGCCCACGGCCCTCAAATAC
CTCCCCCTTCTGGCCATCATCTGCGGTGTCTTCGCTGGCGCTTTCGGCAT
CATCATCCACAACCAAGTCTACTTTCGTCACCACTGCCACGCTCCCGACG
GCGTCACCTTCATCCCCGAAGCCCGTCTCCCGCCTATGATCGTCGGCGGC
ATCTTGGTCCCCATTGGGATGTTCTGGTTTGCAGGCACCGCTACGCCGGC
CACCATCCCCTGGCCCAGTGCCATCTGTGCAAGCTTCTTGATCGGCGCCG
GCATGTATTTGCTCTTCATTCAGGGGTTTAACTACATCGTGGATAACTAT
ACCAGTATGGCGAATAGTGCCATGGGTGTTAACGGATCCATGAGGAGTAT
CTTTGGGGCGGCGTTTCCTCTTTTTGCTAATCAGATGGTGGATGGGCTGG
GGGTGCAGAGGGCGACCATCGTTTTGGCGGCGATTTGTGTGGCTTTGGTG
CCGGTGCCGGTTTGCTTTTGGTATTGGGGGGATAGGATTAGGGCGTGGTC
GTCTGTGAAGGTTCCTGATAATATATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5137285..5138906 + |
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