|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5233904..5236257+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006284-T1 ID=KJC3_006284-T1|Name=KJC3_006284-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2354bp|location=Sequence derived from alignment at ch4:5233904..5236257+ (Aspergillus niger KJC3)
GGGGGAGATTGAAGGGCCACAAGCTTGCTTCTCGAGCTCCTCTCTCTCGC
CTACTAGTATGCTTGCTTCATGAGGCCAGGTGCCTCATCGGCCAGCTGTT
CTTCTTGCTGTCCTCTATCTCTTCCCTTCTCCTGTCTGACCGTCCGGGTC
AAAGACATGACATCATCTCCTTCCGTCGCGATTGTCTGATTCCGGTTACG
CATCCCTGATTGCCTGACACACTAGTGGGACCTGCGCCGATCGAGGGTCG
AATCCTCACAGCCATGGTTGCTCCCAGGAACGCCGCCTACGCGGAGGAGA
GTGCAGAGGTGGAGGTGTTGTACGCCAACCTCGAGAAGCTCAAGCTCCTT
ACGAAGAAGATTCAAGGCTCTTTGAATCGTCTGGAAACCGGGGGCAATGT
GGTGAAGCATGCGATCGGGCCCATCTACAGCAATACCCAATCGCTACAGA
TCACCAACAGCAACATAGATAAAGTCAATGAAGCCATTGAGCGCCTCCGC
CAGCCTCTGGATGCCAAGGGCAAGGAAGAAGGAATTATACGATCAAGGTA
GGCAGCATCTTCGTGGGATCGGGCTAATTAGGGAATGTTTGGCTGACATC
CGTCCAGCCCCCAGACCGTCGGTTTGTCGCAATACCTCTCTGCTGTGAAG
CGCGTGGAAAAGGCCTTGGTCGACCTCAACTCAACCAATCTGCGATCGAA
CCAGAAAGCTATTTCCGAATTTACTTCTTTGCTGGTGCTTGGAAACTCCC
AGCTCCAGGACATGCTCCGCGGCACTTTGAGCGGTTACGTTAATCCGATC
GAACCATTACACTACCTAACAAAAGGTTGGTGTCCACTACACACATCTCA
CTCGGATATAGATACTAATGACTTGCGCCTCGCTCTAGAACTCTCATTCC
CCTCTCTACCTGATGAGACCATCGCGGAGTTGGGTCCAGTATGTTCGGCT
ATCGGCTCTGCAGCGAGCTATGGACCGCAGCGGGGTGATGGCGGAAACCC
CGCCCTCAAAATCTACGCCGATATTCGTGGACCATATATCACATCGAGCT
TGCAGAACCTGGCCATAGCATCTCTCAATACTGTCAAACGACGGGCTGCC
GACGGCCCCTACAAGCAAGGCACCAACGGTATTGGGATCTATTCCAACGC
TTTAGAAAGCTTTATCTATGCAGAACATGATATCCTCGTACGCGTCTTTA
CCGGGGATCAACGGGGGCTGGCTCTGCAAGCAACTTGTCGCTCTGCTTTG
ACCGAATACGCGCAAACCTTGCGCGAGCTCAACCAGTATATCAGAGCAAA
CCTCATGACGGATTGCTTCTTAGCATTCGAGATCATCGAGATTGTTACGG
CCATGTCGTACCGTGTGGAGTCGAAAACAGGCGAGTTGAAAAGCCTTTTC
ATCGAGGCTCTTAGGCCGGTTCGGGAGACGGCAAAATCGTCGCTTTCGGA
GCTATTGGAGGAGACAAAACGCAAGGCTGCAGGGATTGCCATGCTCCCGC
CAGATGGCGGGTCTGTTCCCCTTGTCAATGAAGTCATGAGTTCCCTTACT
ACCCTAACAGGCTATTCGGGGCCGCTCGCATCGATCTTGACATCCCTGGG
AGATGGAAATTGGCGGTCCACGACCAACGCAGCGCCCACGGCGCCCTTGG
ATGTCAGCCCGGACAGCATGACGCTTTTATCGCACTTCATCCTCGATATG
ATTGAAGCTCTCATGATTGCTCTGGAAGCTCGAGGCCGAGCGCTTCACCG
CTCAAAGGCAGTCCAGGGTGTTTTCTTGTCCAACGTATTCTGTACGGTTG
ATCGCTCCATACGGCAGAGTTCTGAGTTAGCCCGATACCTTGGCTCTCCC
GACAGCATTGCACGAATCGATACTTTTCGGAAACGGGCCACTTCGACTTA
TCTCGATGCATGGAAAGAAACTTCCCACTATCTTTTGGACGTGCAGTATA
CCTCTCGGGGCTCTGGTGGGTCAGCACGACCGGCGTCTGGAGGCGTTGTC
GACTCCGCTGCCATTGTTAAATCACTCTCCTCTAAAGACAAGGACGCCAT
CAAAGACAAGTTCAAGGCGTTCAATGCCAGCTTCGACGAATTGGTGGCCC
GTCACAAGGCACTGTATATGGAGCGGGAGGTCCGCGGGGTGCTCGCCCGG
GAGGTCCAGGCTGTTCTCGAGCCACTCTATGCCCGATTCTGGGACCGCTA
TCATGAGATCGACAAGGGACGAGGCAAATATGTCAAATACGACAAAGGCA
GCCTGTCGGCTCAATTGGCAGCGCTTACATGAGGATCGACATCTTAGATA
TATACCTACCTACCTTACCTTCTTATATTCATAATGTGATAATAGTGAGA
TTTG back to topCoding sequence (CDS) from alignment at ch4:5233904..5236257+ >KJC3_006284-T1 ID=KJC3_006284-T1|Name=KJC3_006284-T1|organism=Aspergillus niger KJC3|type=CDS|length=5688bp|location=Sequence derived from alignment at ch4:5233904..5236257+ (Aspergillus niger KJC3)
ATGGTTGCTCCCAGGAACGCCGCCTACGCGGAGGAGAGTGCAGAGGTGGA
GGTGTTGTACGCCAACCTCGAGAAGCTCAAGCTCCTTACGAAGAAGATTC
AAGGCTCTTTGAATCGTCTGGAAACCGGGGGCAATGTGGTGAAGCATGCG
ATCGGGCCCATCTACAGCAATACCCAATCGCTACAGATCACCAACAGCAA
CATAGATAAAGTCAATGAAGCCATTGAGCGCCTCCGCCAGCCTCTGGATG
CCAAGGGCAAGGAAGAAGGAATTATACGATCAAGCCCCCAGACCGTCGGT
TTGTCGCAATACCTCTCTGCTGTGAAGCGCGTGGAAAAGGCCTTGGTCGA
CCTCAACTCAACCAATCTGCGATCGAACCAGAAAGCTATTTCCGAATTTA
CTTCTTTGCTGGTGCTTGGAAACTCCCAGCTCCAGGACATGCTCCGCGGC
ACTTTGAGCGGTTACGTTAATCCGATCGAACCATTACACTACCTAACAAA
AGAACTCTCATTCCCCTCTCTACCTGATGAGACCATCGCGGAGTTGGGTC
CAGTATGTTCGGCTATCGGCTCTGCAGCGAGCTATGGACCGCAGCGGGGT
GATGGCGGAAACCCCGCCCTCAAAATCTACGCCGATATTCGTGGACCATA
TATCACATCGAGCTTGCAGAACCTGGCCATAGCATCTCTCAATACTGTCA
AACGACGGGCTGCCGACGGCCCCTACAAGCAAGGCACCAACGGTATTGGG
ATCTATTCCAACGCTTTAGAAAGCTTTATCTATGCAGAACATGATATCCT
CGTACGCGTCTTTACCGGGGATCAACGGGGGCTGGCTCTGCAAGCAACTT
GTCGCTCTGCTTTGACCGAATACGCGCAAACCTTGCGCGAGCTCAACCAG
TATATCAGAGCAAACCTCATGACGGATTGCTTCTTAGCATTCGAGATCAT
CGAGATTGTTACGGCCATGTCGTACCGTGTGGAGTCGAAAACAGGCGAGT
TGAAAAGCCTTTTCATCGAGGCTCTTAGGCCGGTTCGGGAGACGGCAAAA
TCGTCGCTTTCGGAGCTATTGGAGGAGACAAAACGCAAGGCTGCAGGGAT
TGCCATGCTCCCGCCAGATGGCGGGTCTGTTCCCCTTGTCAATGAAGTCA
TGAGTTCCCTTACTACCCTAACAGGCTATTCGGGGCCGCTCGCATCGATC
TTGACATCCCTGGGAGATGGAAATTGGCGGTCCACGACCAACGCAGCGCC
CACGGCGCCCTTGGATGTCAGCCCGGACAGCATGACGCTTTTATCGCACT
TCATCCTCGATATGATTGAAGCTCTCATGATTGCTCTGGAAGCTCGAGGC
CGAGCGCTTCACCGCTCAAAGGCAGTCCAGGGTGTTTTCTTGTCCAACGT
ATTCTGTACGGTTGATCGCTCCATACGGCAGAGTTCTGAGTTAGCCCGAT
ACCTTGGCTCTCCCGACAGCATTGCACGAATCGATACTTTTCGGAAACGG
GCCACTTCGACTTATCTCGATGCATGGAAAGAAACTTCCCACTATCTTTT
GGACGTGCAGTATACCTCTCGGGGCTCTGGTGGGTCAGCACGACCGGCGT
CTGGAGGCGTTGTCGACTCCGCTGCCATTGTTAAATCACTCTCCTCTAAA
GACAAGGACGCCATCAAAGACAAGTTCAAGGCGTTCAATGCCAGCTTCGA
CGAATTGGTGGCCCGTCACAAGGCACTGTATATGGAGCGGGAGGTCCGCG
GGGTGCTCGCCCGGGAGGTCCAGGCTGTTCTCGAGCCACTCTATGCCCGA
TTCTGGGACCGCTATCATGAGATCGACAAGGGACGAGGCAAATATGTCAA
ATACGACAAAGGCAGCCTGTCGGCTCAATTGGCAGCGCTTACATGAATGG
TTGCTCCCAGGAACGCCGCCTACGCGGAGGAGAGTGCAGAGGTGGAGGTG
TTGTACGCCAACCTCGAGAAGCTCAAGCTCCTTACGAAGAAGATTCAAGG
CTCTTTGAATCGTCTGGAAACCGGGGGCAATGTGGTGAAGCATGCGATCG
GGCCCATCTACAGCAATACCCAATCGCTACAGATCACCAACAGCAACATA
GATAAAGTCAATGAAGCCATTGAGCGCCTCCGCCAGCCTCTGGATGCCAA
GGGCAAGGAAGAAGGAATTATACGATCAAGCCCCCAGACCGTCGGTTTGT
CGCAATACCTCTCTGCTGTGAAGCGCGTGGAAAAGGCCTTGGTCGACCTC
AACTCAACCAATCTGCGATCGAACCAGAAAGCTATTTCCGAATTTACTTC
TTTGCTGGTGCTTGGAAACTCCCAGCTCCAGGACATGCTCCGCGGCACTT
TGAGCGGTTACGTTAATCCGATCGAACCATTACACTACCTAACAAAAGAA
CTCTCATTCCCCTCTCTACCTGATGAGACCATCGCGGAGTTGGGTCCAGT
ATGTTCGGCTATCGGCTCTGCAGCGAGCTATGGACCGCAGCGGGGTGATG
GCGGAAACCCCGCCCTCAAAATCTACGCCGATATTCGTGGACCATATATC
ACATCGAGCTTGCAGAACCTGGCCATAGCATCTCTCAATACTGTCAAACG
ACGGGCTGCCGACGGCCCCTACAAGCAAGGCACCAACGGTATTGGGATCT
ATTCCAACGCTTTAGAAAGCTTTATCTATGCAGAACATGATATCCTCGTA
CGCGTCTTTACCGGGGATCAACGGGGGCTGGCTCTGCAAGCAACTTGTCG
CTCTGCTTTGACCGAATACGCGCAAACCTTGCGCGAGCTCAACCAGTATA
TCAGAGCAAACCTCATGACGGATTGCTTCTTAGCATTCGAGATCATCGAG
ATTGTTACGGCCATGTCGTACCGTGTGGAGTCGAAAACAGGCGAGTTGAA
AAGCCTTTTCATCGAGGCTCTTAGGCCGGTTCGGGAGACGGCAAAATCGT
CGCTTTCGGAGCTATTGGAGGAGACAAAACGCAAGGCTGCAGGGATTGCC
ATGCTCCCGCCAGATGGCGGGTCTGTTCCCCTTGTCAATGAAGTCATGAG
TTCCCTTACTACCCTAACAGGCTATTCGGGGCCGCTCGCATCGATCTTGA
CATCCCTGGGAGATGGAAATTGGCGGTCCACGACCAACGCAGCGCCCACG
GCGCCCTTGGATGTCAGCCCGGACAGCATGACGCTTTTATCGCACTTCAT
CCTCGATATGATTGAAGCTCTCATGATTGCTCTGGAAGCTCGAGGCCGAG
CGCTTCACCGCTCAAAGGCAGTCCAGGGTGTTTTCTTGTCCAACGTATTC
TGTACGGTTGATCGCTCCATACGGCAGAGTTCTGAGTTAGCCCGATACCT
TGGCTCTCCCGACAGCATTGCACGAATCGATACTTTTCGGAAACGGGCCA
CTTCGACTTATCTCGATGCATGGAAAGAAACTTCCCACTATCTTTTGGAC
GTGCAGTATACCTCTCGGGGCTCTGGTGGGTCAGCACGACCGGCGTCTGG
AGGCGTTGTCGACTCCGCTGCCATTGTTAAATCACTCTCCTCTAAAGACA
AGGACGCCATCAAAGACAAGTTCAAGGCGTTCAATGCCAGCTTCGACGAA
TTGGTGGCCCGTCACAAGGCACTGTATATGGAGCGGGAGGTCCGCGGGGT
GCTCGCCCGGGAGGTCCAGGCTGTTCTCGAGCCACTCTATGCCCGATTCT
GGGACCGCTATCATGAGATCGACAAGGGACGAGGCAAATATGTCAAATAC
GACAAAGGCAGCCTGTCGGCTCAATTGGCAGCGCTTACATGAATGGTTGC
TCCCAGGAACGCCGCCTACGCGGAGGAGAGTGCAGAGGTGGAGGTGTTGT
ACGCCAACCTCGAGAAGCTCAAGCTCCTTACGAAGAAGATTCAAGGCTCT
TTGAATCGTCTGGAAACCGGGGGCAATGTGGTGAAGCATGCGATCGGGCC
CATCTACAGCAATACCCAATCGCTACAGATCACCAACAGCAACATAGATA
AAGTCAATGAAGCCATTGAGCGCCTCCGCCAGCCTCTGGATGCCAAGGGC
AAGGAAGAAGGAATTATACGATCAAGCCCCCAGACCGTCGGTTTGTCGCA
ATACCTCTCTGCTGTGAAGCGCGTGGAAAAGGCCTTGGTCGACCTCAACT
CAACCAATCTGCGATCGAACCAGAAAGCTATTTCCGAATTTACTTCTTTG
CTGGTGCTTGGAAACTCCCAGCTCCAGGACATGCTCCGCGGCACTTTGAG
CGGTTACGTTAATCCGATCGAACCATTACACTACCTAACAAAAGAACTCT
CATTCCCCTCTCTACCTGATGAGACCATCGCGGAGTTGGGTCCAGTATGT
TCGGCTATCGGCTCTGCAGCGAGCTATGGACCGCAGCGGGGTGATGGCGG
AAACCCCGCCCTCAAAATCTACGCCGATATTCGTGGACCATATATCACAT
CGAGCTTGCAGAACCTGGCCATAGCATCTCTCAATACTGTCAAACGACGG
GCTGCCGACGGCCCCTACAAGCAAGGCACCAACGGTATTGGGATCTATTC
CAACGCTTTAGAAAGCTTTATCTATGCAGAACATGATATCCTCGTACGCG
TCTTTACCGGGGATCAACGGGGGCTGGCTCTGCAAGCAACTTGTCGCTCT
GCTTTGACCGAATACGCGCAAACCTTGCGCGAGCTCAACCAGTATATCAG
AGCAAACCTCATGACGGATTGCTTCTTAGCATTCGAGATCATCGAGATTG
TTACGGCCATGTCGTACCGTGTGGAGTCGAAAACAGGCGAGTTGAAAAGC
CTTTTCATCGAGGCTCTTAGGCCGGTTCGGGAGACGGCAAAATCGTCGCT
TTCGGAGCTATTGGAGGAGACAAAACGCAAGGCTGCAGGGATTGCCATGC
TCCCGCCAGATGGCGGGTCTGTTCCCCTTGTCAATGAAGTCATGAGTTCC
CTTACTACCCTAACAGGCTATTCGGGGCCGCTCGCATCGATCTTGACATC
CCTGGGAGATGGAAATTGGCGGTCCACGACCAACGCAGCGCCCACGGCGC
CCTTGGATGTCAGCCCGGACAGCATGACGCTTTTATCGCACTTCATCCTC
GATATGATTGAAGCTCTCATGATTGCTCTGGAAGCTCGAGGCCGAGCGCT
TCACCGCTCAAAGGCAGTCCAGGGTGTTTTCTTGTCCAACGTATTCTGTA
CGGTTGATCGCTCCATACGGCAGAGTTCTGAGTTAGCCCGATACCTTGGC
TCTCCCGACAGCATTGCACGAATCGATACTTTTCGGAAACGGGCCACTTC
GACTTATCTCGATGCATGGAAAGAAACTTCCCACTATCTTTTGGACGTGC
AGTATACCTCTCGGGGCTCTGGTGGGTCAGCACGACCGGCGTCTGGAGGC
GTTGTCGACTCCGCTGCCATTGTTAAATCACTCTCCTCTAAAGACAAGGA
CGCCATCAAAGACAAGTTCAAGGCGTTCAATGCCAGCTTCGACGAATTGG
TGGCCCGTCACAAGGCACTGTATATGGAGCGGGAGGTCCGCGGGGTGCTC
GCCCGGGAGGTCCAGGCTGTTCTCGAGCCACTCTATGCCCGATTCTGGGA
CCGCTATCATGAGATCGACAAGGGACGAGGCAAATATGTCAAATACGACA
AAGGCAGCCTGTCGGCTCAATTGGCAGCGCTTACATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000145 | exocyst |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006887 | exocytosis |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006284-T1.utr5p1 | KJC3_006284-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006284-T1.utr3p1 | KJC3_006284-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092612J3 |
| DBxref | InterPro:IPR016159 |
| DBxref | InterPro:IPR004140 |
| DBxref | PFAM:PF03081 |
| Product | exocyst complex component exo70 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5233904..5236257 + |
|
