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KJC3_006306-T1, KJC3_006306-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006306-T1
Unique NameKJC3_006306-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5325893..5327799+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006306-T1 ID=KJC3_006306-T1|Name=KJC3_006306-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1907bp|location=Sequence derived from alignment at ch4:5325893..5327799+ (Aspergillus niger KJC3)
GCTCCATCTTATCTCCTCATTTCAGCTCGTTGTTGATCCGCTCGTCTCCA
ATTCCTTCCGTCTCTCCTTTACATCCCTCCCGTTCTTTCTCTTCTTTATT
TCTATTTTCACTCATTTGAGCCCTTTGCGAATCCTCTCGCTATGGCTACT
GCGGGAGTCTCGCAGGCCACCTCTCCACGCCTGCCTAGTCCGCCCCCGTT
TACGGAGGTCCAGATCGGGCCCAAGTCACCCTCGGTCGGCGAGTCCTTCG
ACCACGAGACGGAGCAATTGCTGGGTGCTTCACAAACCTCGGAGGATGGC
TCTACCCGGAGGATTCGTCCGGGTACTAGAGCTGGGGATATGGCCGTTGG
TCCGCCTCTGATTCCTCTCTCTCAGGTACGGTTTTTGTAAACAAGGCACA
GTTGTCTCCGAGTCCTAGCTCCGCTGACCCAGCCACCCCTTTCTGCGATA
GCTCGATTCCCCCTTCCAACTCCAAGAACACCTCAAGGCTCTCTACAACC
ATTACACACGGCCCGAAGGCACTGATACAGTAGTTCCTATCAGTCGGGAT
GTCGCCATGCAGCTCGCGGAACCTCCGGACGGCGTCGACCGGTCGCTATG
GCTCTACGAACTGTGTCGCTTCCTGACCATGAAAGTCAACAACCTCATCA
TCGCCTTCTTCGCCGATTCCCCTCCCTGCTCCTCCCAGACTTGCCCCGAA
ATGCGTGCATCCGAATGGCAGTACCTCTGTGCCGTTCACGATCCGCCCAA
ATCCTGCTGCGCCATCGACTATTGCTGCCATACTCTCGATTGGGCCACGA
ATATCCTTACGTCGCCTAAATACTTTCCTAGCCGACTGACTCTCGGTTCG
GAGACGGGCGGCGGCGCACAGGCCAGCATGAGACATCTGACCAACATCTT
CCGACGGCTGTATCGCATCTTTGCGCACGCCTGGTTCCAGCACCGAGAGG
TGTTCTGGCAGGTGGAGGGACACGATGGGCTGTATATCTTCTTCAAGACG
GTCTGCGACATGTACAGTCTCATTCCGGAAGATAATTACACGGTTCCTGC
GGAGGCGGAGGGTGTCGATGTTCAGCAGCCAGCGGCACCTGAGCACACGG
ACAATCGTCGGATGACGATCTTGCGCAAGGAGAACGAGCCGTTATCGCTG
GAAAGTATTGAGCCGGCGTCGATCAGCACGGGAGCGACCACGAGGCGTCA
CAAGAATAGCCCGTCGATCAGCTCGAGCGTGACGACCATCAACGAGGGTG
CCGAGGACGACGAGCACCAGCCAAGGCAGCAGGCTGTAGCAGCGGCAACG
GCTGCGGTTGCAGCTGCAAATGCCGCAGCGGCTGTTTCCTCGACGCCTGC
CCCTGCTCCTACGCCTGCCCCTGCACCGAAGGAGGCCGAGCCAACGCCAT
CCGTCGAGGAGCAGCAGAAGCCGGAGCCGGAGCCGGTGCCGCAGCCGGAG
CTGGAGCAATCCGTTGAAGACAATGGGTCTAAGGTCACCGTCTCAGAGGT
CCACGCCGATGATGACGAGGCTGCGCAGGACTCGACAGAGAAGCCGGAAG
AGAAGCCAGAGGAAAAGCCAGAGACTGCTGAGGCCGAGGCCGAGCCCAAG
ACTGAGGTGGAAGCTGAGGCTGAAGAGCCGGCCAAACCTGAAGGCGAAGC
GCCTGCAGAGGCGGAGGCGAAGCCCGAGGTAGAGGCAGAAGTAAAACAAC
CGAGCGAGCAAATTAGCGAACAGGAAGCGCCAGCGCAGGAAGCAGCGCAA
GAGGCGTAGCGACGAGCAGATTCCTTTCTACTGATTTCTTTTTCTGATAT
GATACATGATGGCGTGTGTCGATACCACGGTTGTAATAAGTGAGCATGTT
TGTGAGGAGGGCTCTGATGTAATATACGAGCGATTAATGATACCCTTATG
AGTGGAG
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Coding sequence (CDS) from alignment at ch4:5325893..5327799+

>KJC3_006306-T1 ID=KJC3_006306-T1|Name=KJC3_006306-T1|organism=Aspergillus niger KJC3|type=CDS|length=3084bp|location=Sequence derived from alignment at ch4:5325893..5327799+ (Aspergillus niger KJC3)
ATGGCTACTGCGGGAGTCTCGCAGGCCACCTCTCCACGCCTGCCTAGTCC
GCCCCCGTTTACGGAGGTCCAGATCGGGCCCAAGTCACCCTCGGTCGGCG
AGTCCTTCGACCACGAGACGGAGCAATTGCTGGGTGCTTCACAAACCTCG
GAGGATGGCTCTACCCGGAGGATTCGTCCGGGTACTAGAGCTGGGGATAT
GGCCGTTGGTCCGCCTCTGATTCCTCTCTCTCAGCTCGATTCCCCCTTCC
AACTCCAAGAACACCTCAAGGCTCTCTACAACCATTACACACGGCCCGAA
GGCACTGATACAGTAGTTCCTATCAGTCGGGATGTCGCCATGCAGCTCGC
GGAACCTCCGGACGGCGTCGACCGGTCGCTATGGCTCTACGAACTGTGTC
GCTTCCTGACCATGAAAGTCAACAACCTCATCATCGCCTTCTTCGCCGAT
TCCCCTCCCTGCTCCTCCCAGACTTGCCCCGAAATGCGTGCATCCGAATG
GCAGTACCTCTGTGCCGTTCACGATCCGCCCAAATCCTGCTGCGCCATCG
ACTATTGCTGCCATACTCTCGATTGGGCCACGAATATCCTTACGTCGCCT
AAATACTTTCCTAGCCGACTGACTCTCGGTTCGGAGACGGGCGGCGGCGC
ACAGGCCAGCATGAGACATCTGACCAACATCTTCCGACGGCTGTATCGCA
TCTTTGCGCACGCCTGGTTCCAGCACCGAGAGGTGTTCTGGCAGGTGGAG
GGACACGATGGGCTGTATATCTTCTTCAAGACGGTCTGCGACATGTACAG
TCTCATTCCGGAAGATAATTACACGGTTCCTGCGGAGGCGGAGGGTGTCG
ATGTTCAGCAGCCAGCGGCACCTGAGCACACGGACAATCGTCGGATGACG
ATCTTGCGCAAGGAGAACGAGCCGTTATCGCTGGAAAGTATTGAGCCGGC
GTCGATCAGCACGGGAGCGACCACGAGGCGTCACAAGAATAGCCCGTCGA
TCAGCTCGAGCGTGACGACCATCAACGAGGGTGCCGAGGACGACGAGCAC
CAGCCAAGGCAGCAGGCTGTAGCAGCGGCAACGGCTGCGGTTGCAGCTGC
AAATGCCGCAGCGGCTGTTTCCTCGACGCCTGCCCCTGCTCCTACGCCTG
CCCCTGCACCGAAGGAGGCCGAGCCAACGCCATCCGTCGAGGAGCAGCAG
AAGCCGGAGCCGGAGCCGGTGCCGCAGCCGGAGCTGGAGCAATCCGTTGA
AGACAATGGGTCTAAGGTCACCGTCTCAGAGGTCCACGCCGATGATGACG
AGGCTGCGCAGGACTCGACAGAGAAGCCGGAAGAGAAGCCAGAGGAAAAG
CCAGAGACTGCTGAGGCCGAGGCCGAGCCCAAGACTGAGGTGGAAGCTGA
GGCTGAAGAGCCGGCCAAACCTGAAGGCGAAGCGCCTGCAGAGGCGGAGG
CGAAGCCCGAGGTAGAGGCAGAAGTAAAACAACCGAGCGAGCAAATTAGC
GAACAGGAAGCGCCAGCGCAGGAAGCAGCGCAAGAGGCGTAGATGGCTAC
TGCGGGAGTCTCGCAGGCCACCTCTCCACGCCTGCCTAGTCCGCCCCCGT
TTACGGAGGTCCAGATCGGGCCCAAGTCACCCTCGGTCGGCGAGTCCTTC
GACCACGAGACGGAGCAATTGCTGGGTGCTTCACAAACCTCGGAGGATGG
CTCTACCCGGAGGATTCGTCCGGGTACTAGAGCTGGGGATATGGCCGTTG
GTCCGCCTCTGATTCCTCTCTCTCAGCTCGATTCCCCCTTCCAACTCCAA
GAACACCTCAAGGCTCTCTACAACCATTACACACGGCCCGAAGGCACTGA
TACAGTAGTTCCTATCAGTCGGGATGTCGCCATGCAGCTCGCGGAACCTC
CGGACGGCGTCGACCGGTCGCTATGGCTCTACGAACTGTGTCGCTTCCTG
ACCATGAAAGTCAACAACCTCATCATCGCCTTCTTCGCCGATTCCCCTCC
CTGCTCCTCCCAGACTTGCCCCGAAATGCGTGCATCCGAATGGCAGTACC
TCTGTGCCGTTCACGATCCGCCCAAATCCTGCTGCGCCATCGACTATTGC
TGCCATACTCTCGATTGGGCCACGAATATCCTTACGTCGCCTAAATACTT
TCCTAGCCGACTGACTCTCGGTTCGGAGACGGGCGGCGGCGCACAGGCCA
GCATGAGACATCTGACCAACATCTTCCGACGGCTGTATCGCATCTTTGCG
CACGCCTGGTTCCAGCACCGAGAGGTGTTCTGGCAGGTGGAGGGACACGA
TGGGCTGTATATCTTCTTCAAGACGGTCTGCGACATGTACAGTCTCATTC
CGGAAGATAATTACACGGTTCCTGCGGAGGCGGAGGGTGTCGATGTTCAG
CAGCCAGCGGCACCTGAGCACACGGACAATCGTCGGATGACGATCTTGCG
CAAGGAGAACGAGCCGTTATCGCTGGAAAGTATTGAGCCGGCGTCGATCA
GCACGGGAGCGACCACGAGGCGTCACAAGAATAGCCCGTCGATCAGCTCG
AGCGTGACGACCATCAACGAGGGTGCCGAGGACGACGAGCACCAGCCAAG
GCAGCAGGCTGTAGCAGCGGCAACGGCTGCGGTTGCAGCTGCAAATGCCG
CAGCGGCTGTTTCCTCGACGCCTGCCCCTGCTCCTACGCCTGCCCCTGCA
CCGAAGGAGGCCGAGCCAACGCCATCCGTCGAGGAGCAGCAGAAGCCGGA
GCCGGAGCCGGTGCCGCAGCCGGAGCTGGAGCAATCCGTTGAAGACAATG
GGTCTAAGGTCACCGTCTCAGAGGTCCACGCCGATGATGACGAGGCTGCG
CAGGACTCGACAGAGAAGCCGGAAGAGAAGCCAGAGGAAAAGCCAGAGAC
TGCTGAGGCCGAGGCCGAGCCCAAGACTGAGGTGGAAGCTGAGGCTGAAG
AGCCGGCCAAACCTGAAGGCGAAGCGCCTGCAGAGGCGGAGGCGAAGCCC
GAGGTAGAGGCAGAAGTAAAACAACCGAGCGAGCAAATTAGCGAACAGGA
AGCGCCAGCGCAGGAAGCAGCGCAAGAGGCGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006306KJC3_006306Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006306-T1.utr5p1KJC3_006306-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006306-T1.exon1KJC3_006306-T1.exon1Aspergillus niger KJC3exon
KJC3_006306-T1.exon2KJC3_006306-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006306-T1.cdsKJC3_006306-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006306-T1.utr3p1KJC3_006306-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006306-T1KJC3_006306-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036703
DBxrefInterPro:IPR005301
DBxrefPFAM:PF03637
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5325893..5327799 +
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