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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5420993..5424340- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006351-T1 ID=KJC3_006351-T1|Name=KJC3_006351-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3348bp|location=Sequence derived from alignment at ch4:5420993..5424340- (Aspergillus niger KJC3)
CTTAAAAGCAGACCCCACCTTTTCCACTGGCTTCGATTACTTCGTTGCTG
CTCCTCTTCTTTCTCCTCCTCTCTCTTGTCCGTCGTTTTTGTTGCCTACG
GGGTTTTCCGAGTTTAACAAGGTGCTGCTTCATATAAAATTTGATTTTTA
CCCCCCCCCGTATTCCCTCCCTTATAAGTGGTCTTGCTGTCCCTGGTGGA
ACCGGTGAGCCACAAAGTCACGACATCAGTACCTGAACTGCGTTTGAAAG
CAGGACGTGTATGATACCTGCTTCCGAGTAATCCTATTCTCCTGCAGTGG
CCTGGGACGTGTAAGTCCAACTTTCTTACTACCTCGACAACCGTTGTTCT
GGCTTCTGAATTGCCGGTTCATCACTTTTGTCACGGACCAGAATCTGACC
TACTCTGCCAACAACTAGTGTAACTTTTCGCCATGCACATCAAAGAGAAG
CTCGCTCAAAATGAAGCGGCCGGAAGGACGGGCATTTCCTTCGAGTTCTT
CCCCCCGAAGACGGCCCAAGGTGTTCAGAATCTTTACGACAGAATGGATC
GCATGCACGCATTAGGTCCTTCTTTCATTGATATCACGTGGGGGGCTGGC
GGCCGACTATCGGACCTGACCTGCGAGATGGTCAACGTTGCCCAGTCGGT
GTATGGCTTGGAGACATGCATGCATCTGACTTGCACGGACATGCCCCAAG
AGAAGGTGGACGCCGCACTCCAGGCTGCCTACAAAGCAGGCTGCACCAAC
ATTCTGGCTCTCCGTGGAGACCCTCCGCGTGACAAGGAGGCTTGGGAAGC
TGCAGATGGAGGATTCCGTTATGCGAAAGACTTGGTCAAGTACATTAGGA
GCAAGTATGGAAACCACTTCGATATTGGTGTGGGAGGCTATCCGGAAGGT
GCGGATGACAACCCGGATGTGGAGCAGTTGATCGACCACCTGAAAGAGAA
GGTTGATGCTGGAGCATCGTTTGTCATTACGCAGATGTTTTACGACACGG
ACAACTTCATCGGCTGGGTCAAGAAGTGCAGGGACAGGGGCATCCATGTG
CCCATTATTCCTGGTATTATGCCGATTCAAACCTACGCTGCGTTCATCCG
ACGATCGGACTGGACCAAAACTCGGATTCCCCCGGACTGGCTCGAAGCAC
TGGAACCTGTGAAGAACGACGACGCTGCTGTAAGGGACATTGGAAAGCGG
CTGATTGCAGACATGTGTAGGAGGCTCATTGCGGCTGGTATCAACCACCT
GCACTTGTAAGTGTTCTCTTACGTCTACTTTAACTAACTCGGTCAGACAA
TGACTAACGGGGGTTGGCTAGTTACACAATGAACCTTGCGCAGTCCACAC
AGCTGGTCCTTGACGAACTCAACCTTATGCCTTCCGAAGAGACACCGCTT
CAGAGAGCTCTGCCTTGGAGGCCATCGCTTGGCTTGAACCGCAGAGCCGA
GGATGTTCGCCCGATCTTCTGGAGGAACCGGAACTCGTCCTACATCGCCC
GTACACAGACCTGGGATGAATTCCCGAACGGTCGCTGGACCGATTCTCGT
TCTCCTGCTTTCGGCGAACTTGACAGCTATGGCATCGGCCTCAAGGGTAC
AAACGAGCAGAACATCAAGCTGTGGGGAGAGCCCAAATCCCTTCGGGATC
TTACTCATATCTTTGTCAATTTCCTCGAAGGAAAGCTGGCCCGGTTGCCC
TGGAGCGACACTCCTATCACTACCGAAGCCAACGCGATCAAGACCAGTCT
CATTGACCTGAACCAGAAGGGTCTCTTCACAATCAACTCCCAGCCGGCAG
TGAACGGTGTCAAGTCTTCCCATCCCGTGTATGGATGGGGACCGAAGAAT
GGATATGTTTACCAGAAGGCATATCTCGAACTCTTGGTCCCGCCCTACCT
GATCGACGAGCTGATCGCTCGCATCGAGAAGAATGGTGACCTTACGTACC
ATGCTGTCTCGAAGACGGGTGAACTGCGCACCAACACCCGCGACAGCCCC
AATGCCCTGACCTGGGGTATCTTCGCTGGAAGAGAGATCGTCCAGCCCAC
AATCGTGGAAACTGTCAGTTTCTTGGCTTGGAAGGACGAGGCGTACCGTC
TGGGTGATGACTGGGCCAAATGCCATGATACCTCCAGCCCCAGCAGAAAG
TTGATCCAGGGCGTGATGGACAACTGGCACCTTGTCAACATTGGTGAGCT
CCCAATATAGTGCCCTTGTTGAGAAAATGATGGCTAACACAAGTTTTCCA
GTCAACAACGACTTCCACAACACCAGCAACCTCTTTGATCTATTCAAGGA
CCTGGATGTCCGAGAACTTGATACTGAAATCCCCGTAGAGAACGGTGAGC
CGAAAGCTCACACGAACGGAGCAACAAACGGAACGACCAATGGCGCGACT
GACGGAGCAGCTCCGGAACTTGCAGTGAAAAACTAGATGTGGCTCCTGCA
GCCCCCGTGGGGACAGTCCGCCATTTACTATATGCCTTTCTTCAACCTCA
CTTACGACTTCCTAATTCAACATATATTATTAATTCAACATCTCAACCTC
AACGATTACCTGCCCGAATGAACACTCCCGGGCTTTTGCAACGTTTTACG
GCGGCACGACCATGAAGACCTCTCAACGATTTCTTCCCTGAGCGTTTATT
CTATTTCAACATGACATCTTCACCTTCCAAATTTATACCCCCACCCCCCA
ATTCTCGGATTTTTGCTTTCGCAACCCATCGAGCATGGGAAAAAAGAAAT
ACATCTTCAACAATATTTTCATCTATTCATGATAAAGCTCTTCTCCGGAA
AAGAAAAGGGCCTCCTATCTCAACATTTCTATCTCTCTCTTTGTTCTTCA
ACTCTATCAACAGAGACGGCTTACAGAAAATAAATTCTCGGGGGTATTTA
CGATCTTCAACACACTATGGATGACGGAGTTGGGCTTATGCATTTCAACA
AAAAGTGATCCTCTTCAACATGGGATTTGGAACGGAGTCTTCTTCTAAAT
GGAGCATTTGATACTTTTCTTCCCTTCTTGGCCTCTCTACTTAATCAACT
CTCTTTTTCCTCCTTCTTTGCATTTTATCTTATATATCCGGGTTTTTTCT
CTCATAATTTCTCTTTGCATTCAACATCTTTGCATTCTTGTTGTCGTGGT
GATGGCGGTGGTGAAATACAGGTGTTGGCTAGGCGAGTATTATAATGCCT
AGCATTTCCTATGAGTCAATAGAAGCATGATTTCTTCCCCTTTTCATATT
TCTCTCCTCTTACTTTGGAATAGAATTGGTAGAGCTTGATGCGTCAAAGT
GAGTATGAGATATAGCTATGCATTCAAATCTGTTAAGGATAGATGTGG back to topCoding sequence (CDS) from alignment at ch4:5420993..5424340- >KJC3_006351-T1 ID=KJC3_006351-T1|Name=KJC3_006351-T1|organism=Aspergillus niger KJC3|type=CDS|length=5643bp|location=Sequence derived from alignment at ch4:5420993..5424340- (Aspergillus niger KJC3)
TCAACAACGACTTCCACAACACCAGCAACCTCTTTGATCTATTCAAGGAC
CTGGATGTCCGAGAACTTGATACTGAAATCCCCGTAGAGAACGGTGAGCC
GAAAGCTCACACGAACGGAGCAACAAACGGAACGACCAATGGCGCGACTG
ACGGAGCAGCTCCGGAACTTGCAGTGAAAAACTAGTTACACAATGAACCT
TGCGCAGTCCACACAGCTGGTCCTTGACGAACTCAACCTTATGCCTTCCG
AAGAGACACCGCTTCAGAGAGCTCTGCCTTGGAGGCCATCGCTTGGCTTG
AACCGCAGAGCCGAGGATGTTCGCCCGATCTTCTGGAGGAACCGGAACTC
GTCCTACATCGCCCGTACACAGACCTGGGATGAATTCCCGAACGGTCGCT
GGACCGATTCTCGTTCTCCTGCTTTCGGCGAACTTGACAGCTATGGCATC
GGCCTCAAGGGTACAAACGAGCAGAACATCAAGCTGTGGGGAGAGCCCAA
ATCCCTTCGGGATCTTACTCATATCTTTGTCAATTTCCTCGAAGGAAAGC
TGGCCCGGTTGCCCTGGAGCGACACTCCTATCACTACCGAAGCCAACGCG
ATCAAGACCAGTCTCATTGACCTGAACCAGAAGGGTCTCTTCACAATCAA
CTCCCAGCCGGCAGTGAACGGTGTCAAGTCTTCCCATCCCGTGTATGGAT
GGGGACCGAAGAATGGATATGTTTACCAGAAGGCATATCTCGAACTCTTG
GTCCCGCCCTACCTGATCGACGAGCTGATCGCTCGCATCGAGAAGAATGG
TGACCTTACGTACCATGCTGTCTCGAAGACGGGTGAACTGCGCACCAACA
CCCGCGACAGCCCCAATGCCCTGACCTGGGGTATCTTCGCTGGAAGAGAG
ATCGTCCAGCCCACAATCGTGGAAACTGTCAGTTTCTTGGCTTGGAAGGA
CGAGGCGTACCGTCTGGGTGATGACTGGGCCAAATGCCATGATACCTCCA
GCCCCAGCAGAAAGTTGATCCAGGGCGTGATGGACAACTGGCACCTTGTC
AACATTGATGCACATCAAAGAGAAGCTCGCTCAAAATGAAGCGGCCGGAA
GGACGGGCATTTCCTTCGAGTTCTTCCCCCCGAAGACGGCCCAAGGTGTT
CAGAATCTTTACGACAGAATGGATCGCATGCACGCATTAGGTCCTTCTTT
CATTGATATCACGTGGGGGGCTGGCGGCCGACTATCGGACCTGACCTGCG
AGATGGTCAACGTTGCCCAGTCGGTGTATGGCTTGGAGACATGCATGCAT
CTGACTTGCACGGACATGCCCCAAGAGAAGGTGGACGCCGCACTCCAGGC
TGCCTACAAAGCAGGCTGCACCAACATTCTGGCTCTCCGTGGAGACCCTC
CGCGTGACAAGGAGGCTTGGGAAGCTGCAGATGGAGGATTCCGTTATGCG
AAAGACTTGGTCAAGTACATTAGGAGCAAGTATGGAAACCACTTCGATAT
TGGTGTGGGAGGCTATCCGGAAGGTGCGGATGACAACCCGGATGTGGAGC
AGTTGATCGACCACCTGAAAGAGAAGGTTGATGCTGGAGCATCGTTTGTC
ATTACGCAGATGTTTTACGACACGGACAACTTCATCGGCTGGGTCAAGAA
GTGCAGGGACAGGGGCATCCATGTGCCCATTATTCCTGGTATTATGCCGA
TTCAAACCTACGCTGCGTTCATCCGACGATCGGACTGGACCAAAACTCGG
ATTCCCCCGGACTGGCTCGAAGCACTGGAACCTGTGAAGAACGACGACGC
TGCTGTAAGGGACATTGGAAAGCGGCTGATTGCAGACATGTGTAGGAGGC
TCATTGCGGCTGGTATCAACCACCTGCACTTTCAACAACGACTTCCACAA
CACCAGCAACCTCTTTGATCTATTCAAGGACCTGGATGTCCGAGAACTTG
ATACTGAAATCCCCGTAGAGAACGGTGAGCCGAAAGCTCACACGAACGGA
GCAACAAACGGAACGACCAATGGCGCGACTGACGGAGCAGCTCCGGAACT
TGCAGTGAAAAACTAGTTACACAATGAACCTTGCGCAGTCCACACAGCTG
GTCCTTGACGAACTCAACCTTATGCCTTCCGAAGAGACACCGCTTCAGAG
AGCTCTGCCTTGGAGGCCATCGCTTGGCTTGAACCGCAGAGCCGAGGATG
TTCGCCCGATCTTCTGGAGGAACCGGAACTCGTCCTACATCGCCCGTACA
CAGACCTGGGATGAATTCCCGAACGGTCGCTGGACCGATTCTCGTTCTCC
TGCTTTCGGCGAACTTGACAGCTATGGCATCGGCCTCAAGGGTACAAACG
AGCAGAACATCAAGCTGTGGGGAGAGCCCAAATCCCTTCGGGATCTTACT
CATATCTTTGTCAATTTCCTCGAAGGAAAGCTGGCCCGGTTGCCCTGGAG
CGACACTCCTATCACTACCGAAGCCAACGCGATCAAGACCAGTCTCATTG
ACCTGAACCAGAAGGGTCTCTTCACAATCAACTCCCAGCCGGCAGTGAAC
GGTGTCAAGTCTTCCCATCCCGTGTATGGATGGGGACCGAAGAATGGATA
TGTTTACCAGAAGGCATATCTCGAACTCTTGGTCCCGCCCTACCTGATCG
ACGAGCTGATCGCTCGCATCGAGAAGAATGGTGACCTTACGTACCATGCT
GTCTCGAAGACGGGTGAACTGCGCACCAACACCCGCGACAGCCCCAATGC
CCTGACCTGGGGTATCTTCGCTGGAAGAGAGATCGTCCAGCCCACAATCG
TGGAAACTGTCAGTTTCTTGGCTTGGAAGGACGAGGCGTACCGTCTGGGT
GATGACTGGGCCAAATGCCATGATACCTCCAGCCCCAGCAGAAAGTTGAT
CCAGGGCGTGATGGACAACTGGCACCTTGTCAACATTGATGCACATCAAA
GAGAAGCTCGCTCAAAATGAAGCGGCCGGAAGGACGGGCATTTCCTTCGA
GTTCTTCCCCCCGAAGACGGCCCAAGGTGTTCAGAATCTTTACGACAGAA
TGGATCGCATGCACGCATTAGGTCCTTCTTTCATTGATATCACGTGGGGG
GCTGGCGGCCGACTATCGGACCTGACCTGCGAGATGGTCAACGTTGCCCA
GTCGGTGTATGGCTTGGAGACATGCATGCATCTGACTTGCACGGACATGC
CCCAAGAGAAGGTGGACGCCGCACTCCAGGCTGCCTACAAAGCAGGCTGC
ACCAACATTCTGGCTCTCCGTGGAGACCCTCCGCGTGACAAGGAGGCTTG
GGAAGCTGCAGATGGAGGATTCCGTTATGCGAAAGACTTGGTCAAGTACA
TTAGGAGCAAGTATGGAAACCACTTCGATATTGGTGTGGGAGGCTATCCG
GAAGGTGCGGATGACAACCCGGATGTGGAGCAGTTGATCGACCACCTGAA
AGAGAAGGTTGATGCTGGAGCATCGTTTGTCATTACGCAGATGTTTTACG
ACACGGACAACTTCATCGGCTGGGTCAAGAAGTGCAGGGACAGGGGCATC
CATGTGCCCATTATTCCTGGTATTATGCCGATTCAAACCTACGCTGCGTT
CATCCGACGATCGGACTGGACCAAAACTCGGATTCCCCCGGACTGGCTCG
AAGCACTGGAACCTGTGAAGAACGACGACGCTGCTGTAAGGGACATTGGA
AAGCGGCTGATTGCAGACATGTGTAGGAGGCTCATTGCGGCTGGTATCAA
CCACCTGCACTTTCAACAACGACTTCCACAACACCAGCAACCTCTTTGAT
CTATTCAAGGACCTGGATGTCCGAGAACTTGATACTGAAATCCCCGTAGA
GAACGGTGAGCCGAAAGCTCACACGAACGGAGCAACAAACGGAACGACCA
ATGGCGCGACTGACGGAGCAGCTCCGGAACTTGCAGTGAAAAACTAGTTA
CACAATGAACCTTGCGCAGTCCACACAGCTGGTCCTTGACGAACTCAACC
TTATGCCTTCCGAAGAGACACCGCTTCAGAGAGCTCTGCCTTGGAGGCCA
TCGCTTGGCTTGAACCGCAGAGCCGAGGATGTTCGCCCGATCTTCTGGAG
GAACCGGAACTCGTCCTACATCGCCCGTACACAGACCTGGGATGAATTCC
CGAACGGTCGCTGGACCGATTCTCGTTCTCCTGCTTTCGGCGAACTTGAC
AGCTATGGCATCGGCCTCAAGGGTACAAACGAGCAGAACATCAAGCTGTG
GGGAGAGCCCAAATCCCTTCGGGATCTTACTCATATCTTTGTCAATTTCC
TCGAAGGAAAGCTGGCCCGGTTGCCCTGGAGCGACACTCCTATCACTACC
GAAGCCAACGCGATCAAGACCAGTCTCATTGACCTGAACCAGAAGGGTCT
CTTCACAATCAACTCCCAGCCGGCAGTGAACGGTGTCAAGTCTTCCCATC
CCGTGTATGGATGGGGACCGAAGAATGGATATGTTTACCAGAAGGCATAT
CTCGAACTCTTGGTCCCGCCCTACCTGATCGACGAGCTGATCGCTCGCAT
CGAGAAGAATGGTGACCTTACGTACCATGCTGTCTCGAAGACGGGTGAAC
TGCGCACCAACACCCGCGACAGCCCCAATGCCCTGACCTGGGGTATCTTC
GCTGGAAGAGAGATCGTCCAGCCCACAATCGTGGAAACTGTCAGTTTCTT
GGCTTGGAAGGACGAGGCGTACCGTCTGGGTGATGACTGGGCCAAATGCC
ATGATACCTCCAGCCCCAGCAGAAAGTTGATCCAGGGCGTGATGGACAAC
TGGCACCTTGTCAACATTGATGCACATCAAAGAGAAGCTCGCTCAAAATG
AAGCGGCCGGAAGGACGGGCATTTCCTTCGAGTTCTTCCCCCCGAAGACG
GCCCAAGGTGTTCAGAATCTTTACGACAGAATGGATCGCATGCACGCATT
AGGTCCTTCTTTCATTGATATCACGTGGGGGGCTGGCGGCCGACTATCGG
ACCTGACCTGCGAGATGGTCAACGTTGCCCAGTCGGTGTATGGCTTGGAG
ACATGCATGCATCTGACTTGCACGGACATGCCCCAAGAGAAGGTGGACGC
CGCACTCCAGGCTGCCTACAAAGCAGGCTGCACCAACATTCTGGCTCTCC
GTGGAGACCCTCCGCGTGACAAGGAGGCTTGGGAAGCTGCAGATGGAGGA
TTCCGTTATGCGAAAGACTTGGTCAAGTACATTAGGAGCAAGTATGGAAA
CCACTTCGATATTGGTGTGGGAGGCTATCCGGAAGGTGCGGATGACAACC
CGGATGTGGAGCAGTTGATCGACCACCTGAAAGAGAAGGTTGATGCTGGA
GCATCGTTTGTCATTACGCAGATGTTTTACGACACGGACAACTTCATCGG
CTGGGTCAAGAAGTGCAGGGACAGGGGCATCCATGTGCCCATTATTCCTG
GTATTATGCCGATTCAAACCTACGCTGCGTTCATCCGACGATCGGACTGG
ACCAAAACTCGGATTCCCCCGGACTGGCTCGAAGCACTGGAACCTGTGAA
GAACGACGACGCTGCTGTAAGGGACATTGGAAAGCGGCTGATTGCAGACA
TGTGTAGGAGGCTCATTGCGGCTGGTATCAACCACCTGCACTT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004489 | methylenetetrahydrofolate reductase (NAD(P)H) activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
| GO:0006555 | methionine metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006351-T1.utr3p1 | KJC3_006351-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029041 |
| DBxref | InterPro:IPR004621 |
| DBxref | InterPro:IPR003171 |
| DBxref | PFAM:PF02219 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5420993..5424340 - |
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