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KJC3_006378-T1, KJC3_006378-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006378-T1
Unique NameKJC3_006378-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5512606..5514557+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006378-T1 ID=KJC3_006378-T1|Name=KJC3_006378-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1952bp|location=Sequence derived from alignment at ch4:5512606..5514557+ (Aspergillus niger KJC3)
ATGGAAGAACCAGACCGGCCTGCCAAACGGGCCAAGTTATCCTCCAACAT
AGATAATGCAGACAATGACTCCAACCAAGCGAGCAACAGCAGCAGCATTG
AGAGTAACAATCACCCCCTAGCATCCCTGCACCGCTCCATAACACCTCCA
TTGCTCTCCCGCTCCAAGGGACCAAAAACACCGCCACAACCACAACACAA
TGCCACCCACCCAGCATCACCCAGCACGCAGAAAACCAAAAAGAACAACG
ATAGAGAAATAAACAAGGAGAGTATAATACCCTCTCCCATCCAACTAACC
CACATCCGGGACCTCCCCGCCTCCTCAGGTCACAACACCGACACTGTCCG
ACTGCGCGACATTCTCGGGGATCCATTGATCCGCGAATGCTGGCAGTTCA
ATTACCTCTTTGATGTGGACTTTTTGATGAGCCAGTTTGACGAGGATGTG
AGACGGCTGGTCAAGGTGAAGGTTGTGCATGGCTCGTGGAAGAGAGATGC
GCCGAATCGGCAGAGGATTGATGTATATACCCTTTCTTCATTCTTTTCTT
CCCATATTGACTCGTATTGGGATATGTAATATGTGATAATAATGCTAATG
ACATGAATAGGAAGCATGTACACGTCACCCCAACGTCGAGGCAATAGTGG
CCTACATGCCAGAAGCGTTCGGGACCCATCATTCCAAGATGATGATTTTG
TTGAGACATGATGATTTGGCTCAGTGTGTATCCATAATACCACTAATGTA
TCTAGCAAAGCTAATGCAGTGAACACAGAGTGGTCATCCACACGGCAAAC
ATGATCGCAGGCGACTGGGCAAATATGTGCCAGGCCGTTTGGCGATCTCC
TCTTCTTCCACTCTGTTCCGATGGAAGTGGGAGTGAAAATATAGCCACCC
CCGGGGCACGCTTCAAGCGCGACCTCCTCTCATATCTACGAGAGTACGGG
CAGAGGAAAACCGGTCCGCTTGTTGCGCAGCTTGAGAAACACGACTTCAG
CGCTGTCCGCGCAGCATTGATCGCTAGTGTCCCCTCGAAGCAGAAGATCC
GGGAGTCGACTGATTCGAACCAGAAGACGCTGTGGGGGTGGTTAGCTCTA
AGGGATGTCCTGCGGTCGGTGCCTGTTTCTCCTTCAGAGGATAGACCGCA
TATTGTAACTCAGGTAGGCTGGCTGTCCTTATCACCCACTGGGACTGCCT
ATGGAATATCCACTAACGAAGTATAGATATCCTCCGTCGCCTCTCTCGGC
CAAACTGACAAATGGCTCAAGGACGTCTTCTTTGCGTCCCTTTCCCCGTC
ATCAAACAACCCCAAACCAAGATTCTCGATCGTTTTCCCCACCCCTGATG
AAATCCGTCGTTCCCTGAACGGCTACGGCTCCGGCGGCTCCATCCACATG
AAGCTACAGAGCGCCGCGCAACAGAAACAGCTGCAGTACATGAGGCCGTA
TCTGTGCCACTGGGCTGGAGATGTCGCTGAGGACGAGGTGAAAATGAAAC
GAGAAGCAGGTCGTCGCCGTGCGGCACCGCACATCAAGACGTATATCCGG
TACTCGTCATCGGAGATGGACCGGATTGATTGGGCGATGGTGACATCGGC
GAATTTGTCGACGCAGGCGTGGGGAGCAGCGGTAAATGCTAACGGGGAGG
TGAGGATATGTAGTTGGGAGATAGGGGTTGTGGTTTGGCCGGAGTTGATT
GCCGGTGCTGGTGCTGAGGGGAGGAGTGTGATGATGCCTTGCTTTCGGAG
GGATATGCCTGATGCAGATGCGGTTGCGGCTGCAGATGCAAATGCAAATG
CAGATAAAAAGGAAATTCCTACTACGACTACGGTTGGTTTTCGAATGCCC
TACGATCTGCCGTTGACGAGGTACGGCGAGACGGATATACCCTGGTGTGC
GACGGCTAGTCATAGCGAGCCGGACTGGCTGGGGCAGACGTGGGAGGGAT
AG
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Coding sequence (CDS) from alignment at ch4:5512606..5514557+

>KJC3_006378-T1 ID=KJC3_006378-T1|Name=KJC3_006378-T1|organism=Aspergillus niger KJC3|type=CDS|length=6984bp|location=Sequence derived from alignment at ch4:5512606..5514557+ (Aspergillus niger KJC3)
ATGGAAGAACCAGACCGGCCTGCCAAACGGGCCAAGTTATCCTCCAACAT
AGATAATGCAGACAATGACTCCAACCAAGCGAGCAACAGCAGCAGCATTG
AGAGTAACAATCACCCCCTAGCATCCCTGCACCGCTCCATAACACCTCCA
TTGCTCTCCCGCTCCAAGGGACCAAAAACACCGCCACAACCACAACACAA
TGCCACCCACCCAGCATCACCCAGCACGCAGAAAACCAAAAAGAACAACG
ATAGAGAAATAAACAAGGAGAGTATAATACCCTCTCCCATCCAACTAACC
CACATCCGGGACCTCCCCGCCTCCTCAGGTCACAACACCGACACTGTCCG
ACTGCGCGACATTCTCGGGGATCCATTGATCCGCGAATGCTGGCAGTTCA
ATTACCTCTTTGATGTGGACTTTTTGATGAGCCAGTTTGACGAGGATGTG
AGACGGCTGGTCAAGGTGAAGGTTGTGCATGGCTCGTGGAAGAGAGATGC
GCCGAATCGGCAGAGGATTGATGAAGCATGTACACGTCACCCCAACGTCG
AGGCAATAGTGGCCTACATGCCAGAAGCGTTCGGGACCCATCATTCCAAG
ATGATGATTTTGTTGAGACATGATGATTTGGCTCAAGTGGTCATCCACAC
GGCAAACATGATCGCAGGCGACTGGGCAAATATGTGCCAGGCCGTTTGGC
GATCTCCTCTTCTTCCACTCTGTTCCGATGGAAGTGGGAGTGAAAATATA
GCCACCCCCGGGGCACGCTTCAAGCGCGACCTCCTCTCATATCTACGAGA
GTACGGGCAGAGGAAAACCGGTCCGCTTGTTGCGCAGCTTGAGAAACACG
ACTTCAGCGCTGTCCGCGCAGCATTGATCGCTAGTGTCCCCTCGAAGCAG
AAGATCCGGGAGTCGACTGATTCGAACCAGAAGACGCTGTGGGGGTGGTT
AGCTCTAAGGGATGTCCTGCGGTCGGTGCCTGTTTCTCCTTCAGAGGATA
GACCGCATATTGTAACTCAGATATCCTCCGTCGCCTCTCTCGGCCAAACT
GACAAATGGCTCAAGGACGTCTTCTTTGCGTCCCTTTCCCCGTCATCAAA
CAACCCCAAACCAAGATTCTCGATCGTTTTCCCCACCCCTGATGAAATCC
GTCGTTCCCTGAACGGCTACGGCTCCGGCGGCTCCATCCACATGAAGCTA
CAGAGCGCCGCGCAACAGAAACAGCTGCAGTACATGAGGCCGTATCTGTG
CCACTGGGCTGGAGATGTCGCTGAGGACGAGGTGAAAATGAAACGAGAAG
CAGGTCGTCGCCGTGCGGCACCGCACATCAAGACGTATATCCGGTACTCG
TCATCGGAGATGGACCGGATTGATTGGGCGATGGTGACATCGGCGAATTT
GTCGACGCAGGCGTGGGGAGCAGCGGTAAATGCTAACGGGGAGGTGAGGA
TATGTAGTTGGGAGATAGGGGTTGTGGTTTGGCCGGAGTTGATTGCCGGT
GCTGGTGCTGAGGGGAGGAGTGTGATGATGCCTTGCTTTCGGAGGGATAT
GCCTGATGCAGATGCGGTTGCGGCTGCAGATGCAAATGCAAATGCAGATA
AAAAGGAAATTCCTACTACGACTACGGTTGGTTTTCGAATGCCCTACGAT
CTGCCGTTGACGAGGTACGGCGAGACGGATATACCCTGGTGTGCGACGGC
TAGTCATAGCGAGCCGGACTGGCTGGGGCAGACGTGGGAGGGATAGATGG
AAGAACCAGACCGGCCTGCCAAACGGGCCAAGTTATCCTCCAACATAGAT
AATGCAGACAATGACTCCAACCAAGCGAGCAACAGCAGCAGCATTGAGAG
TAACAATCACCCCCTAGCATCCCTGCACCGCTCCATAACACCTCCATTGC
TCTCCCGCTCCAAGGGACCAAAAACACCGCCACAACCACAACACAATGCC
ACCCACCCAGCATCACCCAGCACGCAGAAAACCAAAAAGAACAACGATAG
AGAAATAAACAAGGAGAGTATAATACCCTCTCCCATCCAACTAACCCACA
TCCGGGACCTCCCCGCCTCCTCAGGTCACAACACCGACACTGTCCGACTG
CGCGACATTCTCGGGGATCCATTGATCCGCGAATGCTGGCAGTTCAATTA
CCTCTTTGATGTGGACTTTTTGATGAGCCAGTTTGACGAGGATGTGAGAC
GGCTGGTCAAGGTGAAGGTTGTGCATGGCTCGTGGAAGAGAGATGCGCCG
AATCGGCAGAGGATTGATGAAGCATGTACACGTCACCCCAACGTCGAGGC
AATAGTGGCCTACATGCCAGAAGCGTTCGGGACCCATCATTCCAAGATGA
TGATTTTGTTGAGACATGATGATTTGGCTCAAGTGGTCATCCACACGGCA
AACATGATCGCAGGCGACTGGGCAAATATGTGCCAGGCCGTTTGGCGATC
TCCTCTTCTTCCACTCTGTTCCGATGGAAGTGGGAGTGAAAATATAGCCA
CCCCCGGGGCACGCTTCAAGCGCGACCTCCTCTCATATCTACGAGAGTAC
GGGCAGAGGAAAACCGGTCCGCTTGTTGCGCAGCTTGAGAAACACGACTT
CAGCGCTGTCCGCGCAGCATTGATCGCTAGTGTCCCCTCGAAGCAGAAGA
TCCGGGAGTCGACTGATTCGAACCAGAAGACGCTGTGGGGGTGGTTAGCT
CTAAGGGATGTCCTGCGGTCGGTGCCTGTTTCTCCTTCAGAGGATAGACC
GCATATTGTAACTCAGATATCCTCCGTCGCCTCTCTCGGCCAAACTGACA
AATGGCTCAAGGACGTCTTCTTTGCGTCCCTTTCCCCGTCATCAAACAAC
CCCAAACCAAGATTCTCGATCGTTTTCCCCACCCCTGATGAAATCCGTCG
TTCCCTGAACGGCTACGGCTCCGGCGGCTCCATCCACATGAAGCTACAGA
GCGCCGCGCAACAGAAACAGCTGCAGTACATGAGGCCGTATCTGTGCCAC
TGGGCTGGAGATGTCGCTGAGGACGAGGTGAAAATGAAACGAGAAGCAGG
TCGTCGCCGTGCGGCACCGCACATCAAGACGTATATCCGGTACTCGTCAT
CGGAGATGGACCGGATTGATTGGGCGATGGTGACATCGGCGAATTTGTCG
ACGCAGGCGTGGGGAGCAGCGGTAAATGCTAACGGGGAGGTGAGGATATG
TAGTTGGGAGATAGGGGTTGTGGTTTGGCCGGAGTTGATTGCCGGTGCTG
GTGCTGAGGGGAGGAGTGTGATGATGCCTTGCTTTCGGAGGGATATGCCT
GATGCAGATGCGGTTGCGGCTGCAGATGCAAATGCAAATGCAGATAAAAA
GGAAATTCCTACTACGACTACGGTTGGTTTTCGAATGCCCTACGATCTGC
CGTTGACGAGGTACGGCGAGACGGATATACCCTGGTGTGCGACGGCTAGT
CATAGCGAGCCGGACTGGCTGGGGCAGACGTGGGAGGGATAGATGGAAGA
ACCAGACCGGCCTGCCAAACGGGCCAAGTTATCCTCCAACATAGATAATG
CAGACAATGACTCCAACCAAGCGAGCAACAGCAGCAGCATTGAGAGTAAC
AATCACCCCCTAGCATCCCTGCACCGCTCCATAACACCTCCATTGCTCTC
CCGCTCCAAGGGACCAAAAACACCGCCACAACCACAACACAATGCCACCC
ACCCAGCATCACCCAGCACGCAGAAAACCAAAAAGAACAACGATAGAGAA
ATAAACAAGGAGAGTATAATACCCTCTCCCATCCAACTAACCCACATCCG
GGACCTCCCCGCCTCCTCAGGTCACAACACCGACACTGTCCGACTGCGCG
ACATTCTCGGGGATCCATTGATCCGCGAATGCTGGCAGTTCAATTACCTC
TTTGATGTGGACTTTTTGATGAGCCAGTTTGACGAGGATGTGAGACGGCT
GGTCAAGGTGAAGGTTGTGCATGGCTCGTGGAAGAGAGATGCGCCGAATC
GGCAGAGGATTGATGAAGCATGTACACGTCACCCCAACGTCGAGGCAATA
GTGGCCTACATGCCAGAAGCGTTCGGGACCCATCATTCCAAGATGATGAT
TTTGTTGAGACATGATGATTTGGCTCAAGTGGTCATCCACACGGCAAACA
TGATCGCAGGCGACTGGGCAAATATGTGCCAGGCCGTTTGGCGATCTCCT
CTTCTTCCACTCTGTTCCGATGGAAGTGGGAGTGAAAATATAGCCACCCC
CGGGGCACGCTTCAAGCGCGACCTCCTCTCATATCTACGAGAGTACGGGC
AGAGGAAAACCGGTCCGCTTGTTGCGCAGCTTGAGAAACACGACTTCAGC
GCTGTCCGCGCAGCATTGATCGCTAGTGTCCCCTCGAAGCAGAAGATCCG
GGAGTCGACTGATTCGAACCAGAAGACGCTGTGGGGGTGGTTAGCTCTAA
GGGATGTCCTGCGGTCGGTGCCTGTTTCTCCTTCAGAGGATAGACCGCAT
ATTGTAACTCAGATATCCTCCGTCGCCTCTCTCGGCCAAACTGACAAATG
GCTCAAGGACGTCTTCTTTGCGTCCCTTTCCCCGTCATCAAACAACCCCA
AACCAAGATTCTCGATCGTTTTCCCCACCCCTGATGAAATCCGTCGTTCC
CTGAACGGCTACGGCTCCGGCGGCTCCATCCACATGAAGCTACAGAGCGC
CGCGCAACAGAAACAGCTGCAGTACATGAGGCCGTATCTGTGCCACTGGG
CTGGAGATGTCGCTGAGGACGAGGTGAAAATGAAACGAGAAGCAGGTCGT
CGCCGTGCGGCACCGCACATCAAGACGTATATCCGGTACTCGTCATCGGA
GATGGACCGGATTGATTGGGCGATGGTGACATCGGCGAATTTGTCGACGC
AGGCGTGGGGAGCAGCGGTAAATGCTAACGGGGAGGTGAGGATATGTAGT
TGGGAGATAGGGGTTGTGGTTTGGCCGGAGTTGATTGCCGGTGCTGGTGC
TGAGGGGAGGAGTGTGATGATGCCTTGCTTTCGGAGGGATATGCCTGATG
CAGATGCGGTTGCGGCTGCAGATGCAAATGCAAATGCAGATAAAAAGGAA
ATTCCTACTACGACTACGGTTGGTTTTCGAATGCCCTACGATCTGCCGTT
GACGAGGTACGGCGAGACGGATATACCCTGGTGTGCGACGGCTAGTCATA
GCGAGCCGGACTGGCTGGGGCAGACGTGGGAGGGATAGATGGAAGAACCA
GACCGGCCTGCCAAACGGGCCAAGTTATCCTCCAACATAGATAATGCAGA
CAATGACTCCAACCAAGCGAGCAACAGCAGCAGCATTGAGAGTAACAATC
ACCCCCTAGCATCCCTGCACCGCTCCATAACACCTCCATTGCTCTCCCGC
TCCAAGGGACCAAAAACACCGCCACAACCACAACACAATGCCACCCACCC
AGCATCACCCAGCACGCAGAAAACCAAAAAGAACAACGATAGAGAAATAA
ACAAGGAGAGTATAATACCCTCTCCCATCCAACTAACCCACATCCGGGAC
CTCCCCGCCTCCTCAGGTCACAACACCGACACTGTCCGACTGCGCGACAT
TCTCGGGGATCCATTGATCCGCGAATGCTGGCAGTTCAATTACCTCTTTG
ATGTGGACTTTTTGATGAGCCAGTTTGACGAGGATGTGAGACGGCTGGTC
AAGGTGAAGGTTGTGCATGGCTCGTGGAAGAGAGATGCGCCGAATCGGCA
GAGGATTGATGAAGCATGTACACGTCACCCCAACGTCGAGGCAATAGTGG
CCTACATGCCAGAAGCGTTCGGGACCCATCATTCCAAGATGATGATTTTG
TTGAGACATGATGATTTGGCTCAAGTGGTCATCCACACGGCAAACATGAT
CGCAGGCGACTGGGCAAATATGTGCCAGGCCGTTTGGCGATCTCCTCTTC
TTCCACTCTGTTCCGATGGAAGTGGGAGTGAAAATATAGCCACCCCCGGG
GCACGCTTCAAGCGCGACCTCCTCTCATATCTACGAGAGTACGGGCAGAG
GAAAACCGGTCCGCTTGTTGCGCAGCTTGAGAAACACGACTTCAGCGCTG
TCCGCGCAGCATTGATCGCTAGTGTCCCCTCGAAGCAGAAGATCCGGGAG
TCGACTGATTCGAACCAGAAGACGCTGTGGGGGTGGTTAGCTCTAAGGGA
TGTCCTGCGGTCGGTGCCTGTTTCTCCTTCAGAGGATAGACCGCATATTG
TAACTCAGATATCCTCCGTCGCCTCTCTCGGCCAAACTGACAAATGGCTC
AAGGACGTCTTCTTTGCGTCCCTTTCCCCGTCATCAAACAACCCCAAACC
AAGATTCTCGATCGTTTTCCCCACCCCTGATGAAATCCGTCGTTCCCTGA
ACGGCTACGGCTCCGGCGGCTCCATCCACATGAAGCTACAGAGCGCCGCG
CAACAGAAACAGCTGCAGTACATGAGGCCGTATCTGTGCCACTGGGCTGG
AGATGTCGCTGAGGACGAGGTGAAAATGAAACGAGAAGCAGGTCGTCGCC
GTGCGGCACCGCACATCAAGACGTATATCCGGTACTCGTCATCGGAGATG
GACCGGATTGATTGGGCGATGGTGACATCGGCGAATTTGTCGACGCAGGC
GTGGGGAGCAGCGGTAAATGCTAACGGGGAGGTGAGGATATGTAGTTGGG
AGATAGGGGTTGTGGTTTGGCCGGAGTTGATTGCCGGTGCTGGTGCTGAG
GGGAGGAGTGTGATGATGCCTTGCTTTCGGAGGGATATGCCTGATGCAGA
TGCGGTTGCGGCTGCAGATGCAAATGCAAATGCAGATAAAAAGGAAATTC
CTACTACGACTACGGTTGGTTTTCGAATGCCCTACGATCTGCCGTTGACG
AGGTACGGCGAGACGGATATACCCTGGTGTGCGACGGCTAGTCATAGCGA
GCCGGACTGGCTGGGGCAGACGTGGGAGGGATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0008081phosphoric diester hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006378KJC3_006378Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006378-T1.exon1KJC3_006378-T1.exon1Aspergillus niger KJC3exon
KJC3_006378-T1.exon2KJC3_006378-T1.exon2Aspergillus niger KJC3exon
KJC3_006378-T1.exon3KJC3_006378-T1.exon3Aspergillus niger KJC3exon
KJC3_006378-T1.exon4KJC3_006378-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006378-T1.cdsKJC3_006378-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006378-T1KJC3_006378-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR010347
DBxrefInterPro:IPR027415
DBxrefPFAM:PF06087
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5512606..5514557 +
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