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KJC3_006395-T1, KJC3_006395-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006395-T1
Unique NameKJC3_006395-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5551826..5553911-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006395-T1 ID=KJC3_006395-T1|Name=KJC3_006395-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2086bp|location=Sequence derived from alignment at ch4:5551826..5553911- (Aspergillus niger KJC3)
GTCCGGAACGTCCCTGATTTTCCTGCTGCCCTCCATTGATTATCGGTCAA
CTCCTCCTCCTCCCTCCTCTTTCCCCCTTCACCTCCTCTTTCCCTCCCTC
CTCCCCCCCTTTCACCTTTTTCTCTCCCTCCCCCGGGATTGCCTGCAATT
GCTCGCCAGCATGGCTTCCCACAAGGTTCCGGATGCCATTGCCCCGGCAG
AGCAGCCGCCATCGCCCTCCTCCGATCGCCAGGATTCCATGGCTTCCGCA
GCCAAGATCATCCAGAATGCCAAAGCGGCCACGGATAAGGAGCAGAAGAT
GACCCTGCTCCAGGGTATCAAGCTCTACCCCAAGGCCGTCGCTTGGAGTA
TCCTGATCTCCACCTGCATTGTCATGGAAGGCTACGATATCAGTCTCGTC
AACAACTTCTACGCTTTCCCTCAATTCAACCGGAAATATGGCGAGTTGTC
GGCGGATGGGACATATCAGGTGCCAGCACGGGTAATTGACTCCCTCCCCT
CTATCTCCCTGGGACCTTCCTGCAATTGCACTGTTATCTCGCACGTCATG
CAGTGCTCGCGTGACAAAATCGGCTGACAAAAGTCTCCTATATAGTGGCA
ATCGGGTTTGAGTAACGGCGCCTATGTCGGAGAAATTATCGGCCTTTTCA
TTAATGGCTGGGCTTCGGAACGCTTCGGATATCGTTATACTATCATGGCT
TGTCTCGTTTTGATCACAGCGTGGACCGCCATCTTCTTCACCGCCCCGAA
TGTCCAGGCGCTGCTGGCTGCGGAAATTCTGGCCGGTATTCCTTGGGGTG
TTTTTCAGACATTGACCGTCACCTATGCTTCGGAGGTGTGTCCGGTTGCG
CTGCGTGGGTACCTCACGACCTATGTCAACTTCTGCTGGGGATTGGGACA
ATTGATCGGTATCGGTGTGATCAAGGGTATGATTAATAGGGATGACCAAT
GGGCGTACCGGATCCCCTATGGACTGCAGTGGATGTGGCCCTTGCCCCTC
TTCATCGGCATTTCTCTCGCCCCGGAGTCTCCATGGTGGTTGGTCCGGAA
GGGCAAGACCCAGCAAGCCAAGAAAGCCCTGCTGCGATTGACGAGCGTGA
AGCGGGAGACCAACTTCGACGCCGACGAGACCATTTCGATGATGGTTCAT
ACCACGGCCCTGGAGAACAAGATCACTACAGGGGCCAGCTATCTGGACTG
TTTCAAAGGCACCGACCTGCGCCGGACCGAGATCGTCTGCATGGTGTGGG
CCATTCAAAACCTCAGTGGCAACTCCTTTTCCAACTACTCGACTTACTTC
CTCGAGCAGGCAGGCCTGAGCACTGACAATGCCTACGCATTTGCCATGGG
CCAGTACGGAATCAATATGGTCGGCGTCTTTGGAGCCTGGTTCCTCATGT
CCATCGGCCTGGGCCGGAGAACGCTCTACCTATACGGTCTCTGCGGACTG
TGCGTCATGTTGCTTGTCATGGGATTCCTTGGCCTAGTGCCCGAAGAGCA
CAAAACCCAGGCCGCACTGGCAACCGGCTGCATGATGATCATCTGGGCGC
TCTTCTACCAATTGACCGTCGGCACGGTCGCCTACTCCCTTGTCGCCGAG
CTCTCTACTCGCCGCCTCCAAATCAAGACGGTCGTGCTTGGCCGCAATCT
GTACAACATTGTGGCCATCGTCTGCGGTGTCTTGACCCCGTACATGCTGA
ACCCCGGAGCGTGGGACTGGGGTAACTATGCCGGCTTCTTCTGGGGCGGC
ATCTGCTTCCTCTGCATCGTGTACACGTTCTTCCGGGTGCCGGAACCCAA
TGGACGGTCGTTCGCGGAGCTCGACCTCCTCTTCGAGCGGGGGGTCAGTG
CGCGCAAGTTCGCCCAGACCCAGGTCGATGTGTTTGACGAGACCATGGAG
CATGGCACGGTCGATCACTATCAGACGGAGAAGACGGCGGCGGCTGATGT
GGCGGCCGTGGGGAAGGAGAATTCGAATCCGACTTCGACTCCACCGCAAT
GATGAATGACGCCCGCTTGTAATAAAATTTTAATATATTAATGTACATAG
AGACAGCTAATAATGAATATAGACGATTAATGATGC
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Coding sequence (CDS) from alignment at ch4:5551826..5553911-

>KJC3_006395-T1 ID=KJC3_006395-T1|Name=KJC3_006395-T1|organism=Aspergillus niger KJC3|type=CDS|length=3456bp|location=Sequence derived from alignment at ch4:5551826..5553911- (Aspergillus niger KJC3)
TGGCAATCGGGTTTGAGTAACGGCGCCTATGTCGGAGAAATTATCGGCCT
TTTCATTAATGGCTGGGCTTCGGAACGCTTCGGATATCGTTATACTATCA
TGGCTTGTCTCGTTTTGATCACAGCGTGGACCGCCATCTTCTTCACCGCC
CCGAATGTCCAGGCGCTGCTGGCTGCGGAAATTCTGGCCGGTATTCCTTG
GGGTGTTTTTCAGACATTGACCGTCACCTATGCTTCGGAGGTGTGTCCGG
TTGCGCTGCGTGGGTACCTCACGACCTATGTCAACTTCTGCTGGGGATTG
GGACAATTGATCGGTATCGGTGTGATCAAGGGTATGATTAATAGGGATGA
CCAATGGGCGTACCGGATCCCCTATGGACTGCAGTGGATGTGGCCCTTGC
CCCTCTTCATCGGCATTTCTCTCGCCCCGGAGTCTCCATGGTGGTTGGTC
CGGAAGGGCAAGACCCAGCAAGCCAAGAAAGCCCTGCTGCGATTGACGAG
CGTGAAGCGGGAGACCAACTTCGACGCCGACGAGACCATTTCGATGATGG
TTCATACCACGGCCCTGGAGAACAAGATCACTACAGGGGCCAGCTATCTG
GACTGTTTCAAAGGCACCGACCTGCGCCGGACCGAGATCGTCTGCATGGT
GTGGGCCATTCAAAACCTCAGTGGCAACTCCTTTTCCAACTACTCGACTT
ACTTCCTCGAGCAGGCAGGCCTGAGCACTGACAATGCCTACGCATTTGCC
ATGGGCCAGTACGGAATCAATATGGTCGGCGTCTTTGGAGCCTGGTTCCT
CATGTCCATCGGCCTGGGCCGGAGAACGCTCTACCTATACGGTCTCTGCG
GACTGTGCGTCATGTTGCTTGTCATGGGATTCCTTGGCCTAGTGCCCGAA
GAGCACAAAACCCAGGCCGCACTGGCAACCGGCTGCATGATGATCATCTG
GGCGCTCTTCTACCAATTGACCGTCGGCACGGTCGCCTACTCCCTTGTCG
CCGAGCTCTCTACTCGCCGCCTCCAAATCAAGACGGTCGTGCTTGGCCGC
AATCTGTACAACATTGTGGCCATCGTCTGCGGTGTCTTGACCCCGTACAT
GCTGAACCCCGGAGCGTGGGACTGGGGTAACTATGCCGGCTTCTTCTGGG
GCGGCATCTGCTTCCTCTGCATCGTGTACACGTTCTTCCGGGTGCCGGAA
CCCAATGGACGGTCGTTCGCGGAGCTCGACCTCCTCTTCGAGCGGGGGGT
CAGTGCGCGCAAGTTCGCCCAGACCCAGGTCGATGTGTTTGACGAGACCA
TGGAGCATGGCACGGTCGATCACTATCAGACGGAGAAGACGGCGGCGGCT
GATGTGGCGGCCGTGGGGAAGGAGAATTCGAATCCGACTTCGACTCCACC
GCAATGAATGGCTTCCCACAAGGTTCCGGATGCCATTGCCCCGGCAGAGC
AGCCGCCATCGCCCTCCTCCGATCGCCAGGATTCCATGGCTTCCGCAGCC
AAGATCATCCAGAATGCCAAAGCGGCCACGGATAAGGAGCAGAAGATGAC
CCTGCTCCAGGGTATCAAGCTCTACCCCAAGGCCGTCGCTTGGAGTATCC
TGATCTCCACCTGCATTGTCATGGAAGGCTACGATATCAGTCTCGTCAAC
AACTTCTACGCTTTCCCTCAATTCAACCGGAAATATGGCGAGTTGTCGGC
GGATGGGACATATCAGGTGCCAGCACGGTGGCAATCGGGTTTGAGTAACG
GCGCCTATGTCGGAGAAATTATCGGCCTTTTCATTAATGGCTGGGCTTCG
GAACGCTTCGGATATCGTTATACTATCATGGCTTGTCTCGTTTTGATCAC
AGCGTGGACCGCCATCTTCTTCACCGCCCCGAATGTCCAGGCGCTGCTGG
CTGCGGAAATTCTGGCCGGTATTCCTTGGGGTGTTTTTCAGACATTGACC
GTCACCTATGCTTCGGAGGTGTGTCCGGTTGCGCTGCGTGGGTACCTCAC
GACCTATGTCAACTTCTGCTGGGGATTGGGACAATTGATCGGTATCGGTG
TGATCAAGGGTATGATTAATAGGGATGACCAATGGGCGTACCGGATCCCC
TATGGACTGCAGTGGATGTGGCCCTTGCCCCTCTTCATCGGCATTTCTCT
CGCCCCGGAGTCTCCATGGTGGTTGGTCCGGAAGGGCAAGACCCAGCAAG
CCAAGAAAGCCCTGCTGCGATTGACGAGCGTGAAGCGGGAGACCAACTTC
GACGCCGACGAGACCATTTCGATGATGGTTCATACCACGGCCCTGGAGAA
CAAGATCACTACAGGGGCCAGCTATCTGGACTGTTTCAAAGGCACCGACC
TGCGCCGGACCGAGATCGTCTGCATGGTGTGGGCCATTCAAAACCTCAGT
GGCAACTCCTTTTCCAACTACTCGACTTACTTCCTCGAGCAGGCAGGCCT
GAGCACTGACAATGCCTACGCATTTGCCATGGGCCAGTACGGAATCAATA
TGGTCGGCGTCTTTGGAGCCTGGTTCCTCATGTCCATCGGCCTGGGCCGG
AGAACGCTCTACCTATACGGTCTCTGCGGACTGTGCGTCATGTTGCTTGT
CATGGGATTCCTTGGCCTAGTGCCCGAAGAGCACAAAACCCAGGCCGCAC
TGGCAACCGGCTGCATGATGATCATCTGGGCGCTCTTCTACCAATTGACC
GTCGGCACGGTCGCCTACTCCCTTGTCGCCGAGCTCTCTACTCGCCGCCT
CCAAATCAAGACGGTCGTGCTTGGCCGCAATCTGTACAACATTGTGGCCA
TCGTCTGCGGTGTCTTGACCCCGTACATGCTGAACCCCGGAGCGTGGGAC
TGGGGTAACTATGCCGGCTTCTTCTGGGGCGGCATCTGCTTCCTCTGCAT
CGTGTACACGTTCTTCCGGGTGCCGGAACCCAATGGACGGTCGTTCGCGG
AGCTCGACCTCCTCTTCGAGCGGGGGGTCAGTGCGCGCAAGTTCGCCCAG
ACCCAGGTCGATGTGTTTGACGAGACCATGGAGCATGGCACGGTCGATCA
CTATCAGACGGAGAAGACGGCGGCGGCTGATGTGGCGGCCGTGGGGAAGG
AGAATTCGAATCCGACTTCGACTCCACCGCAATGAATGGCTTCCCACAAG
GTTCCGGATGCCATTGCCCCGGCAGAGCAGCCGCCATCGCCCTCCTCCGA
TCGCCAGGATTCCATGGCTTCCGCAGCCAAGATCATCCAGAATGCCAAAG
CGGCCACGGATAAGGAGCAGAAGATGACCCTGCTCCAGGGTATCAAGCTC
TACCCCAAGGCCGTCGCTTGGAGTATCCTGATCTCCACCTGCATTGTCAT
GGAAGGCTACGATATCAGTCTCGTCAACAACTTCTACGCTTTCCCTCAAT
TCAACCGGAAATATGGCGAGTTGTCGGCGGATGGGACATATCAGGTGCCA
GCACGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006395KJC3_006395Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006395-T1KJC3_006395-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006395-T1.cdsKJC3_006395-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006395-T1.utr3p1KJC3_006395-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006395-T1.exon2KJC3_006395-T1.exon2Aspergillus niger KJC3exon
KJC3_006395-T1.exon1KJC3_006395-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006395-T1.utr5p1KJC3_006395-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR003663
DBxrefInterPro:IPR005828
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5551826..5553911 -
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