|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5856710..5858848+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006491-T1 ID=KJC3_006491-T1|Name=KJC3_006491-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2139bp|location=Sequence derived from alignment at ch4:5856710..5858848+ (Aspergillus niger KJC3)
ATGTGGAAGTCATTCAAGGAAAAGCATGCTAGCAAGTTCGGATCCGGGCC
TTCGCCCTCGCCCGCTCCGCCGAAGAGCGACCGCGACCAAGACTTGACTA
CCATCTTGGATCGCCCCCAGCGAGCCGACCTGACAGTTCTTGTCGCGGAA
ATCACCCAACATATGCGAGATGCCATCGTCCGGAACTTTCACGGTCCTAT
TCAAAAAGAGAATGACACCTCACGTGACCAATCTACACATGAACATCACA
AGGACACTGATCCCTTGTCTGCTCAGTCGGACGCGCAGAGAGAGGAAACC
ACAGCTGTGACTACTCAATCGGAATACAAGCTCACCGCGCAAGATCTAAA
ATCAGAGGCCAAGTCCCTGTCTAGCTTTGATGACTGGAGAGACTCGGTCC
TATTGAGAATTGGTGAAGTTGTGAACCGAGATGAGGAATCTGAAGAAGAC
CCCAGTGAATCAGACTCACCTCAACAATTACGTGAACCGGATATAGATGA
GGACCAAGGTTCTCTGGAGAAGCTCTGTGAAGTGTACCGACCTGTGGAGA
CTCCTCTTACGCAGCTACCCAAGGCTAAAAGGCTACTGATTCTCCATTCG
CTACTGCTCTTAATGCTTAGTCTTGAGCACTACAATGCTCGCTCGCGAGT
TCTAATGCTGTATGTAGCGTCAAGTCTGAATCTCGATGTCACCATCCTTA
ATGGTGACGAGAGCAAGGTCGCACGTGGATTGCTTGACACTGCTCTTCAA
CTCGCGAACGCGGAGGAAGGCCAAGAAAAGAAACGTGATTCCTCCAGGAA
ATGGAAGGTTGGGATAGCTTCTGTTGCAGGAGCTGCACTGATCGGCATTA
CTGGCGGACTTGCCGCACCACTTGTTGCAGCTGGCCTTGGAACAGTCTTG
GGAGGCCTTGGTCTCGGTGCTACCGCTGCTGCAGGATATCTAGGTGCCCT
CGCAGGTAGTGGAGTGATCGTGGGTGGTCTCTTTGGCGCCTACGGAGGTC
GAATGACGGGACGCATGGTCGACAAGTATGCCCGTGAGGTGGACGATTTT
GCTTTCCTGCCTATTCGGGGCTCCCGACAGAGGTCTGAAGATGAGAGGGA
AGCTGCCCAGAATGATCACATGCTCCGCGTCACGATCGGCATTACCGGCT
GGGTTACTGAAGAAGACAATTTCGTTGTTCCCTGGCGAGTCATTGGAGCC
GATTCCGAGGTATTCGGTCTGCGCTGGGAAACAGAGCCTTTGATGAAGCT
TGGAAATGCTATGAATCTATTGGTCACGAGCGCTGCCTGGGCGGCAGGTG
GGCAGGTGCTTTCTCGGACCATCTTCGCACAGATCATGAGCGCCGTAATG
CTGCCTCTTGGTCTTCTCAAGGTTGCCCGTGTGGCTGATAACCCGTTTAG
CATTGCCAAAGCCCGAGCAGACAAAGCGGGTGAGGTCCTGGCGGATGCGC
TGATTAGCAAGGTTCAGGGTGAGCGGGCCGTCACATTGATAGGCTACTCG
ATGGGCTCTCGCGTCATCTTCTCCTGCCTGCAAAGCCTGGCGAAGCGAGG
TGCATATGATCTGGTGGAATCGGCAATTCTGATGGGCTCACCCACTCCCT
CCAATGCACCGCACTGGCGTCGTCTGCGAAGCGTTGTTAGCGGTCGGCTG
ATCAACGTGTACTCGGAGAACGACGCCGTTCTCGCTCTTCTCTACCGAAC
CAGCAGTCTGCAACTCGGTGTGGCAGGTCTACAGTCTGTTCAGGATGTGC
CCGGCGTTGAGAATCTGGACGTCAGCGAGACCGTTAGCGGCCATTTGCGC
TACCAATTTCTCATCGGGCGCATTTTAGGACTTGTCGGCCTGCAAAGTGT
AGATGCCGAGGAGGTGGCTCGTGAAGAGGCCGCATTGGCCGTGAAGGACA
AAAAGCAGGAGCAGGAACGGATCCAAAACGAGCGTCGTGCTGGGGTTAAG
GGTGACGAGTCGGCACAGCGAGTGTTGGACAACGGCGATGGAACCGAAGA
GGAAGCAATTCATGCCGAAGTTGAACAGGAGACACAGGATCGACTTTTTC
GCATGGAGGTGTCTGAAGGAAGCGAAGGCCAACCAGCCCGATCTGAGTTT
AAGATCAAGAGACGCCCACTTCCATCAGAGCAGAGTTAG back to topCoding sequence (CDS) from alignment at ch4:5856710..5858848+ >KJC3_006491-T1 ID=KJC3_006491-T1|Name=KJC3_006491-T1|organism=Aspergillus niger KJC3|type=CDS|length=2139bp|location=Sequence derived from alignment at ch4:5856710..5858848+ (Aspergillus niger KJC3)
ATGTGGAAGTCATTCAAGGAAAAGCATGCTAGCAAGTTCGGATCCGGGCC
TTCGCCCTCGCCCGCTCCGCCGAAGAGCGACCGCGACCAAGACTTGACTA
CCATCTTGGATCGCCCCCAGCGAGCCGACCTGACAGTTCTTGTCGCGGAA
ATCACCCAACATATGCGAGATGCCATCGTCCGGAACTTTCACGGTCCTAT
TCAAAAAGAGAATGACACCTCACGTGACCAATCTACACATGAACATCACA
AGGACACTGATCCCTTGTCTGCTCAGTCGGACGCGCAGAGAGAGGAAACC
ACAGCTGTGACTACTCAATCGGAATACAAGCTCACCGCGCAAGATCTAAA
ATCAGAGGCCAAGTCCCTGTCTAGCTTTGATGACTGGAGAGACTCGGTCC
TATTGAGAATTGGTGAAGTTGTGAACCGAGATGAGGAATCTGAAGAAGAC
CCCAGTGAATCAGACTCACCTCAACAATTACGTGAACCGGATATAGATGA
GGACCAAGGTTCTCTGGAGAAGCTCTGTGAAGTGTACCGACCTGTGGAGA
CTCCTCTTACGCAGCTACCCAAGGCTAAAAGGCTACTGATTCTCCATTCG
CTACTGCTCTTAATGCTTAGTCTTGAGCACTACAATGCTCGCTCGCGAGT
TCTAATGCTGTATGTAGCGTCAAGTCTGAATCTCGATGTCACCATCCTTA
ATGGTGACGAGAGCAAGGTCGCACGTGGATTGCTTGACACTGCTCTTCAA
CTCGCGAACGCGGAGGAAGGCCAAGAAAAGAAACGTGATTCCTCCAGGAA
ATGGAAGGTTGGGATAGCTTCTGTTGCAGGAGCTGCACTGATCGGCATTA
CTGGCGGACTTGCCGCACCACTTGTTGCAGCTGGCCTTGGAACAGTCTTG
GGAGGCCTTGGTCTCGGTGCTACCGCTGCTGCAGGATATCTAGGTGCCCT
CGCAGGTAGTGGAGTGATCGTGGGTGGTCTCTTTGGCGCCTACGGAGGTC
GAATGACGGGACGCATGGTCGACAAGTATGCCCGTGAGGTGGACGATTTT
GCTTTCCTGCCTATTCGGGGCTCCCGACAGAGGTCTGAAGATGAGAGGGA
AGCTGCCCAGAATGATCACATGCTCCGCGTCACGATCGGCATTACCGGCT
GGGTTACTGAAGAAGACAATTTCGTTGTTCCCTGGCGAGTCATTGGAGCC
GATTCCGAGGTATTCGGTCTGCGCTGGGAAACAGAGCCTTTGATGAAGCT
TGGAAATGCTATGAATCTATTGGTCACGAGCGCTGCCTGGGCGGCAGGTG
GGCAGGTGCTTTCTCGGACCATCTTCGCACAGATCATGAGCGCCGTAATG
CTGCCTCTTGGTCTTCTCAAGGTTGCCCGTGTGGCTGATAACCCGTTTAG
CATTGCCAAAGCCCGAGCAGACAAAGCGGGTGAGGTCCTGGCGGATGCGC
TGATTAGCAAGGTTCAGGGTGAGCGGGCCGTCACATTGATAGGCTACTCG
ATGGGCTCTCGCGTCATCTTCTCCTGCCTGCAAAGCCTGGCGAAGCGAGG
TGCATATGATCTGGTGGAATCGGCAATTCTGATGGGCTCACCCACTCCCT
CCAATGCACCGCACTGGCGTCGTCTGCGAAGCGTTGTTAGCGGTCGGCTG
ATCAACGTGTACTCGGAGAACGACGCCGTTCTCGCTCTTCTCTACCGAAC
CAGCAGTCTGCAACTCGGTGTGGCAGGTCTACAGTCTGTTCAGGATGTGC
CCGGCGTTGAGAATCTGGACGTCAGCGAGACCGTTAGCGGCCATTTGCGC
TACCAATTTCTCATCGGGCGCATTTTAGGACTTGTCGGCCTGCAAAGTGT
AGATGCCGAGGAGGTGGCTCGTGAAGAGGCCGCATTGGCCGTGAAGGACA
AAAAGCAGGAGCAGGAACGGATCCAAAACGAGCGTCGTGCTGGGGTTAAG
GGTGACGAGTCGGCACAGCGAGTGTTGGACAACGGCGATGGAACCGAAGA
GGAAGCAATTCATGCCGAAGTTGAACAGGAGACACAGGATCGACTTTTTC
GCATGGAGGTGTCTGAAGGAAGCGAAGGCCAACCAGCCCGATCTGAGTTT
AAGATCAAGAGACGCCCACTTCCATCAGAGCAGAGTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR007941 |
| DBxref | PFAM:PF05277 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5856710..5858848 + |
|
