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KJC3_006511-T1, KJC3_006511-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006511-T1
Unique NameKJC3_006511-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5923456..5924880+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006511-T1 ID=KJC3_006511-T1|Name=KJC3_006511-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1425bp|location=Sequence derived from alignment at ch4:5923456..5924880+ (Aspergillus niger KJC3)
AACCGCGCAGTCACCAGAACTTCAATTCAAATCCCCCCCAAGCTCTCGGA
TTGTTCGCCAGTGTTCTGATATCCTCCTCTTCTCCTTTTTCCTTTTCTCC
TTTCCCTTTTCTCTCTCTATTTTCATCTGTGTATTCATATTCTCTATAAC
CAGTTTAATAACCCACCCACACCTTCCCGCCAATTCAACCACTTCACCTA
GTCAACATGTCGAACATCTGGGACTCCATCACCGGTCGCAAACAATCCAA
GGTCTCCGAGGCCACCGCATCAGCACCAGATGCTACCAGCTTCCTGTCCG
ATCTTCCCGACCCTTCCCAGCTCCATCCCCTCGCCGGCCTGAACCAAGAT
ACCCTCGACTACATCACGCTCGAAGACTCCGCGCTCGACCAAACACCCGG
ATCGCGCTCTGTACTGCCCTCCCGCGGTTGGTCCGACGACCTCTGCTATG
GAACGGGAACGACCTACCTTGCTGGTTTGACTCTCGGTGGTGCCTGGGGT
CTGGCGGAGGGACTGAAGAAGACGCCCGTCACCGCTCCGCCGAAGATCCG
CCTCAACGGTGCTCTCAACTCCATTACGAGGCGTGGACCTTTCCTTGGTA
ACTCGGCTGGTGTGGTCGCGATGGTCTACAACGGGTTTAACTCCGGTCTG
GGCTACGCGAGGGGTAAGCACGATGCTGCTAACAGCATCGTGGCGGGTGC
GTTGAGTGGAATGGTTTTCAAGAGTACGAGGGGTCTCAAGCCTATGGTGA
TCTCTGGTGGTATCGTTGCTGGCATCGCTGGTGGTTGGGCTGTAAGTTTC
CTGCCATTCTTGTTCTTGTTTAATTATCTTGTGCTTGAGCATATGACTAA
TATGTCGTGTCTCTCAACAGGTCCTGAGCAAGGCTATCCTGTAAACGCCT
ACAGCCGCCTTCACTCTCTCATAACTGTATTCTAGCCCTCGACTCGCTAC
TTCGACTCATATCGACTGAGTCAATCCACCTGATCCGTCCACGCGTTTCG
GAATCCCCATATGATTGTATGGTATATGGCCTCTTCACCGAAGACAGAGA
CAAGGGACATCGGCCTGCCTGATGTCTAAAACTCTGTTTTGTTTTGTTTT
CTCGCTGTATTAGAACGGTTTCTCCTTATACTTTTATCCTCGTCGACTCA
CACACATCTTCCCTCTGGCGTACAAAGCATCGTTTGTCGCATTACTTTAC
AGTCCATGGGTTCGGAACCGGCATGGCAATGGGTTTATTCTTTACTTTTT
TAGTGTTTATCTTCTGTACATATAGCGTGAGTTCTCCTATGGGGTTGCGG
GTTAGTCTTTTCTTTGCTGGCGAGAAAATATCCGTTATTGCAAAGCAGGA
AGCTAGCTTAGCTACCTTAAGTTGAAACCTTAATGTGAAATTAGGGAGTA
ACAATGAACAACAACTACTATCTTA
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Coding sequence (CDS) from alignment at ch4:5923456..5924880+

>KJC3_006511-T1 ID=KJC3_006511-T1|Name=KJC3_006511-T1|organism=Aspergillus niger KJC3|type=CDS|length=1218bp|location=Sequence derived from alignment at ch4:5923456..5924880+ (Aspergillus niger KJC3)
ATGTCGAACATCTGGGACTCCATCACCGGTCGCAAACAATCCAAGGTCTC
CGAGGCCACCGCATCAGCACCAGATGCTACCAGCTTCCTGTCCGATCTTC
CCGACCCTTCCCAGCTCCATCCCCTCGCCGGCCTGAACCAAGATACCCTC
GACTACATCACGCTCGAAGACTCCGCGCTCGACCAAACACCCGGATCGCG
CTCTGTACTGCCCTCCCGCGGTTGGTCCGACGACCTCTGCTATGGAACGG
GAACGACCTACCTTGCTGGTTTGACTCTCGGTGGTGCCTGGGGTCTGGCG
GAGGGACTGAAGAAGACGCCCGTCACCGCTCCGCCGAAGATCCGCCTCAA
CGGTGCTCTCAACTCCATTACGAGGCGTGGACCTTTCCTTGGTAACTCGG
CTGGTGTGGTCGCGATGGTCTACAACGGGTTTAACTCCGGTCTGGGCTAC
GCGAGGGGTAAGCACGATGCTGCTAACAGCATCGTGGCGGGTGCGTTGAG
TGGAATGGTTTTCAAGAGTACGAGGGGTCTCAAGCCTATGGTGATCTCTG
GTGGTATCGTTGCTGGCATCGCTGGTGGTTGGGCTGTCCTGAGCAAGGCT
ATCCTGTAAATGTCGAACATCTGGGACTCCATCACCGGTCGCAAACAATC
CAAGGTCTCCGAGGCCACCGCATCAGCACCAGATGCTACCAGCTTCCTGT
CCGATCTTCCCGACCCTTCCCAGCTCCATCCCCTCGCCGGCCTGAACCAA
GATACCCTCGACTACATCACGCTCGAAGACTCCGCGCTCGACCAAACACC
CGGATCGCGCTCTGTACTGCCCTCCCGCGGTTGGTCCGACGACCTCTGCT
ATGGAACGGGAACGACCTACCTTGCTGGTTTGACTCTCGGTGGTGCCTGG
GGTCTGGCGGAGGGACTGAAGAAGACGCCCGTCACCGCTCCGCCGAAGAT
CCGCCTCAACGGTGCTCTCAACTCCATTACGAGGCGTGGACCTTTCCTTG
GTAACTCGGCTGGTGTGGTCGCGATGGTCTACAACGGGTTTAACTCCGGT
CTGGGCTACGCGAGGGGTAAGCACGATGCTGCTAACAGCATCGTGGCGGG
TGCGTTGAGTGGAATGGTTTTCAAGAGTACGAGGGGTCTCAAGCCTATGG
TGATCTCTGGTGGTATCGTTGCTGGCATCGCTGGTGGTTGGGCTGTCCTG
AGCAAGGCTATCCTGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006511KJC3_006511Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006511-T1.utr5p1KJC3_006511-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006511-T1.exon1KJC3_006511-T1.exon1Aspergillus niger KJC3exon
KJC3_006511-T1.exon2KJC3_006511-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006511-T1.cdsKJC3_006511-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006511-T1.utr3p1KJC3_006511-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006511-T1KJC3_006511-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264NC7
DBxrefPFAM:PF02466
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5923456..5924880 +
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