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KJC3_006540-T1, KJC3_006540-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006540-T1
Unique NameKJC3_006540-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:6000551..6002506+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006540-T1 ID=KJC3_006540-T1|Name=KJC3_006540-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1956bp|location=Sequence derived from alignment at ch4:6000551..6002506+ (Aspergillus niger KJC3)
GTCGTTTCTCACGGGGTGCCACTAATGGACAATATGCCGTTCACGGTAGG
TTTCGTGTCTACACTATACGTTGTCGGGGCTGATTGTTTGTCTAAGAACC
CAGAAAACGAGTACTTAGAAAACATCGACTTCTGCGCCTCCTACCCGGAT
TCGTGAGTGATCCTACTGACAGCGTTTTTATAGATATCCCAACCGAGTCA
GCGGCAAATGGTTACAATACCAAAGGCGACGTGAATGAAAGCTTCCCAAT
GGCCGCAATAGAAATGTTTTGGGGGCAGTTGGATCAGCATGGCTATCTAC
TGTGAATGTCCGGCCCGGAAAGGCGTCCCGGTAACAGGAAAAGTCGCCAA
GGACAACGAGGCTAGCGCGAGTCGGGGAGAAAGCGAAAGGGAAGCAACCC
TACCTATGGGGTACCTTCGGACAGGAATCGCCTTTTCGGGTGTCTACATT
ATGATCACGCGCGCGCAACAGCCTGGCAATGCAATTGCACAATCCCCACC
TGTCCCGCTGCATTATGACCCGTAATGTTCAGCTATGCTTCTCCCCGCCA
GGAGTCTTCTTCGACACTCCTGATGACGTTCGAATGAGGGAACAACCAGT
GGAGGGCGGTTGAGAGCTAACGCTGGTTGTGGGTAGTGGTGATATTGAAC
TTGATGTTGGGTTCAGGCGCGAGAACCGCTTCGAAGCGCAAGGATTTTCT
ATCGACCAGAGCAAGACGCAAATTGGGTATGATAAAGACCAATTAGGGGC
ACATCACTCGTCCGACACGGTAGAATCCTTTTCAGATGGCTCTATCTTTC
CAAATCAGCTCGTTGCCCGGCAGGAAGCAAATAATAACGACTTTCCTTCT
TTTGGCTTATCCAACGCAGTGGATCTCTTTTTAAACGCCTTATTTCGTCT
ATATCGGCTCGTTGCCCGGCACGAAGCAAATAATAACAACTTTTCTTCTT
TTGGCTTATCCAACGCAGTGGATCTCCTTTTAAACGCCTTATTTCGTCTA
AATCGGCTCGATGCCCGGCACGAAGCAAATAATAACGACTATCCTTTTTT
TCACTTATCCAACGCAGTGGATCTCTTTTTAGAAGCCTTATTTCGTCTAA
ATCGGCTCGTTGCCCGGCACGAAGCAAATAATAACGACTTTCCTTCTTTT
GGCTTACCCAACGCAGTGGATCTTCTTTTTTACGCCTTGATCCTTCTAAA
TCAGCTCGTTGCCAGGCACGAAGCAAATAATAACGACTATCCTTTTTTTC
ACTTATCCATCGCAGTGGATCTCTTTTTAGAAGCCTTATTTCGTCTAGAT
CAGCTCGTTGCCCGGCACGAAGCAAATAACAACGACTTTCCTTCTCTTCT
TGACTTTTCCAACACAGTGGACCTCCTTTACAGAAATTCTGACCTTCTAA
AGCGGCTCGTTGCCCGGCACGAAGCAAATAGTAATAATCTTCCTTCTCTT
CCTGACTCGTTCTCTCCCGTTCATGCGGACAGCTATTTGTTTGTACCCTG
TACCCGATCACTTAGAGATAGTGACTCACTAACTGGCCCTACAGGAGCCC
AGACTGCAATTCGGATTCCACGCTTTCTGTAAGTGGAAGATCTCAGGGCT
GTTTTCGACCACTCCTGCCAAAGCCAACGCAGCATCAGAGCCGGGGGCCA
AGTCCTGCAGCGTCAACAAAGTCGTTTCGTTGCAATTTGTGTTCGAAGAG
CTACGGATCTCGGGGGGGATTGAATAGGCACGAGCGGAAGAAACACGGTG
CAGAGAAAAAAACCGGTGGTCGACCGCCGACTTGCTCGAGGAAATTGACT
GAGACTTGCGGAGGGGGTAAAAAAAGGGCTTTTTTTACGTTTGATATTGC
TGGCTGGACTGGTGGTTTACCACAAAGACTTTGTTACAGCTGTCTGTTGT
TCGTCTAGAATGTCCAAAATAGATGCACGGTACTTTTCCAATACGTTCAA
GGAGTC
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Coding sequence (CDS) from alignment at ch4:6000551..6002506+

>KJC3_006540-T1 ID=KJC3_006540-T1|Name=KJC3_006540-T1|organism=Aspergillus niger KJC3|type=CDS|length=237bp|location=Sequence derived from alignment at ch4:6000551..6002506+ (Aspergillus niger KJC3)
ATGGCTATCTACTGTGAATGTCCGGCCCGGAAAGGCGTCCCGGTAACAGG
AAAAGTCGCCAAGGACAACGAGGCTAGCGCGAGTCGGGGAGAAAGCGAAA
GGGAAGCAACCCTACCTATGGGGTACCTTCGGACAGGAATCGCCTTTTCG
GGTGTCTACATTATGATCACGCGCGCGCAACAGCCTGGCAATGCAATTGC
ACAATCCCCACCTGTCCCGCTGCATTATGACCCGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006540KJC3_006540Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006540-T1KJC3_006540-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006540-T1.utr5p1KJC3_006540-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_006540-T1.utr5p2KJC3_006540-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006540-T1.utr5p3KJC3_006540-T1.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006540-T1.exon1KJC3_006540-T1.exon1Aspergillus niger KJC3exon
KJC3_006540-T1.exon2KJC3_006540-T1.exon2Aspergillus niger KJC3exon
KJC3_006540-T1.exon3KJC3_006540-T1.exon3Aspergillus niger KJC3exon
KJC3_006540-T1.exon4KJC3_006540-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006540-T1.cdsKJC3_006540-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006540-T1.utr3p1KJC3_006540-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_006540-T1.utr3p2KJC3_006540-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:6000551..6002506 +
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