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KJC3_006825-T1, KJC3_006825-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006825-T1
Unique NameKJC3_006825-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:564642..567214-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006825-T1 ID=KJC3_006825-T1|Name=KJC3_006825-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2573bp|location=Sequence derived from alignment at ch5:564642..567214- (Aspergillus niger KJC3)
GCGTACTGTGGATTTTATGCGAAATAAGGAAATCCAGGGCGGGAGAGGAG
AAGGTGGACGCTGACTGCACAATGGTCCGCGCGATGAGGCCAGGCGCATC
AATTTCCAGGAGATCATGAAAAAAGTTAATCAAAGTCATATGCATGAGCA
CATCATCCTTGTCGACCATATGGCAAGCAGCGAAATGGAGAAGGCCATTG
CTCTGGTATTTCCTCTCAACTTCTGGCACTTGTGGCTTCGAAATAATATC
CCAATGCAGTCGACCCGCCTTCACAAGCAGTCCCATCAACCGTCCCTGGG
CTACAGTCTTGTCGCGCTTGGACAGACTTCCGGATCCATTCTCCTTGAGA
CTGCAGAGGGAAAATAGCAGTCCATAAACATCCTTGTCCGTGAAAATTCG
TCTCCAAACGAGCCCTTGTCCACCGGTGGCCTCCTCTCCCTCATGCCCAC
TATTCTCGAGCGGACTGGCCGAGTCAACCTCCAACAGCTCCCAAATTGTG
TCAAATGCCGCCTGTGCTACCGCTGTGGAAGAGGTCGAAAGCCACAGCTC
CACCAGAGACGAGACCAATTCCGGATCGCCGGCAACGATGGCAGCATCAC
TAGCGACATGACCTGCTTTGCGCAGCAATGACAGAGCCAATAGGTTGATG
GGTTCCGATGGGGCCTTGAAACCGGCGATGAAATTGATCGGAGGATCGAC
GGAGTGAAGGTCAGCGAAGCTGAGATACGTAGTAGCCTTGACTCCAAGAG
CGGTAAGAGGAGTCGGGTCCTCCTGCAGGACGGGGAGAAGCTGCGATATC
TGGATCAAAAGGGTGGCGGGGACTCTGCGATCGACGTTCTCGGTAAGCTC
GAGCTTCAACTTGTCTAGGAGAGTCGTATCCAGAGGAGTGGAGGGCTCGC
GCTGCACCTGTTCCAGGTGCTGTCGGACCTCATCGTAAGTAGATGGGACG
GCCATGTTGATTCCAGACAGATCCACGATGATGCGATCCGTGGGGAAGCG
AGAGACGACGAAGGCAAGTCAGGAACGGCTTTCTTATCCTCGGCGGCGGG
GAAAGCTGGTTGCAAACGGGACAAACACCGATGACATCTCCGCCAGTCTC
CCCGACGATAAGTTCCAGACTATCACTGCTTCCTCCTATCATTTCACCTC
GGTATACCATCTCCTCCTTCAAGGACATATTGTTCATCATGTCTGATCAG
CCGGAATCCCTCCTATCTCCGAAGAACTCCGACTCCGGCCTCCATATCCA
GCTCCACCCTCTGATCCTCCTGACCATCTCAGACCACATCACCCGCCATG
CCGCCCGCTCTCAGCAAGGACCTATAGTGGGAGCGCTTCTAGGCCAGCAG
AACGGACGCGAAATCACCTTGGAACACGTCTTTGAGTGTATTGTGAACGA
GGGCCCCAATGGAGATCTGCAGATTCCGCAGGACTGGTTCGTAGAGAGAG
TCAAGCAATGTAAGTCCCGTCCACTTGTATCTCAACCATCTACATGCATC
TGGGCGCTGACCCCCTCCAAGTCAAAGATGTACACAAAGCTCCTGCCCTT
GACCTTGTCGGCTGGTGGTCAACTGCTCCCCCGTCCGGCCCCAACACCGT
CCACCTCCCAATCCATCGCCAGATCCTCCACAACCACAACGAGTCCGCCG
TGTTCCTCGCGTTCCACCCATCCCTGGTACAAGATGCATCCTCCAACGGC
GGCAAGCTCCCTGTGACAATCTACGAAAGCGTATACGAGGGCGAAAATGC
GACAGAGAACAGCAAGACAATGCAGGTTGATGGAGAGGAACAATCCCTAA
CGATTCGCTTCCGAGAACTGCCCTACTCCGTCGAAACGGGGGAAGCCGAG
ATGATTGGCGTCGACACAGTAGCAAGGACAGCCAGAAACGCCGCCGCAGA
CACACAAGGCACGGCCTCTCTCACAAAACAATCAGCCGGCAAAGAACCCA
GCAAGGATCAGTCAGAAGTGCTCTCCCCCGAGGAAGAAGAACGTAAGCAT
CCCTCCACCCCCATACCTAAAACCAAACGTCCATCACTAACCAAAACTAC
CCCACACAGTAATCGCCAGCCTCACCACCCGCCTCAACGCCATCAAGACC
CTCGAATCCCGTATCTCCCTCATCAAATCCTACGTCGCGAGCATCTCCAC
CTCCGACCCAGAAACCCCCAACTCAACAACAACCCTCTCCCACCCCATCC
TCCGCAACATCAACGCTCTCCTCTCGCACCTCTCCCTTCTCACCCCTGAT
GAACAAAGCGCCTTCACAGCCGAAGCCATCGCCCAGAGCAACGACGTCCA
CCTCGTCTCCCTATTAGGACAACTCGGCCAGAGCATCAGCGCGATGCGCG
AGCTCGGGAAACGAACTGCGCTGATGAACAGTGTCAGACGGACGATGATG
TCGCGGAAAACGCAACAATTATCTTGGCAGAATCGGTTCACTGAACCTTT
TTCGACTGGGGATGGGGTGAGTCATGGATAGGAGTGAGGTATCTGGTGTG
AGATGGAGTTAATCAACATTAGTAGCTGATAGGAGTCTTAACGAACCATG
AATGCATGATCATACCCTGACTG
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Coding sequence (CDS) from alignment at ch5:564642..567214-

>KJC3_006825-T1 ID=KJC3_006825-T1|Name=KJC3_006825-T1|organism=Aspergillus niger KJC3|type=CDS|length=3816bp|location=Sequence derived from alignment at ch5:564642..567214- (Aspergillus niger KJC3)
TAATCGCCAGCCTCACCACCCGCCTCAACGCCATCAAGACCCTCGAATCC
CGTATCTCCCTCATCAAATCCTACGTCGCGAGCATCTCCACCTCCGACCC
AGAAACCCCCAACTCAACAACAACCCTCTCCCACCCCATCCTCCGCAACA
TCAACGCTCTCCTCTCGCACCTCTCCCTTCTCACCCCTGATGAACAAAGC
GCCTTCACAGCCGAAGCCATCGCCCAGAGCAACGACGTCCACCTCGTCTC
CCTATTAGGACAACTCGGCCAGAGCATCAGCGCGATGCGCGAGCTCGGGA
AACGAACTGCGCTGATGAACAGTGTCAGACGGACGATGATGTCGCGGAAA
ACGCAACAATTATCTTGGCAGAATCGGTTCACTGAACCTTTTTCGACTGG
GGATGGGGTGAGTCATGGATAGTCAAAGATGTACACAAAGCTCCTGCCCT
TGACCTTGTCGGCTGGTGGTCAACTGCTCCCCCGTCCGGCCCCAACACCG
TCCACCTCCCAATCCATCGCCAGATCCTCCACAACCACAACGAGTCCGCC
GTGTTCCTCGCGTTCCACCCATCCCTGGTACAAGATGCATCCTCCAACGG
CGGCAAGCTCCCTGTGACAATCTACGAAAGCGTATACGAGGGCGAAAATG
CGACAGAGAACAGCAAGACAATGCAGGTTGATGGAGAGGAACAATCCCTA
ACGATTCGCTTCCGAGAACTGCCCTACTCCGTCGAAACGGGGGAAGCCGA
GATGATTGGCGTCGACACAGTAGCAAGGACAGCCAGAAACGCCGCCGCAG
ACACACAAGGCACGGCCTCTCTCACAAAACAATCAGCCGGCAAAGAACCC
AGCAAGGATCAGTCAGAAGTGCTCTCCCCCGAGGAAGAAGAACATGACAT
CTCCGCCAGTCTCCCCGACGATAAGTTCCAGACTATCACTGCTTCCTCCT
ATCATTTCACCTCGGTATACCATCTCCTCCTTCAAGGACATATTGTTCAT
CATGTCTGATCAGCCGGAATCCCTCCTATCTCCGAAGAACTCCGACTCCG
GCCTCCATATCCAGCTCCACCCTCTGATCCTCCTGACCATCTCAGACCAC
ATCACCCGCCATGCCGCCCGCTCTCAGCAAGGACCTATAGTGGGAGCGCT
TCTAGGCCAGCAGAACGGACGCGAAATCACCTTGGAACACGTCTTTGAGT
GTATTGTGAACGAGGGCCCCAATGGAGATCTGCAGATTCCGCAGGACTGG
TTCGTAGAGAGAGTCAAGCAATTAATCGCCAGCCTCACCACCCGCCTCAA
CGCCATCAAGACCCTCGAATCCCGTATCTCCCTCATCAAATCCTACGTCG
CGAGCATCTCCACCTCCGACCCAGAAACCCCCAACTCAACAACAACCCTC
TCCCACCCCATCCTCCGCAACATCAACGCTCTCCTCTCGCACCTCTCCCT
TCTCACCCCTGATGAACAAAGCGCCTTCACAGCCGAAGCCATCGCCCAGA
GCAACGACGTCCACCTCGTCTCCCTATTAGGACAACTCGGCCAGAGCATC
AGCGCGATGCGCGAGCTCGGGAAACGAACTGCGCTGATGAACAGTGTCAG
ACGGACGATGATGTCGCGGAAAACGCAACAATTATCTTGGCAGAATCGGT
TCACTGAACCTTTTTCGACTGGGGATGGGGTGAGTCATGGATAGTCAAAG
ATGTACACAAAGCTCCTGCCCTTGACCTTGTCGGCTGGTGGTCAACTGCT
CCCCCGTCCGGCCCCAACACCGTCCACCTCCCAATCCATCGCCAGATCCT
CCACAACCACAACGAGTCCGCCGTGTTCCTCGCGTTCCACCCATCCCTGG
TACAAGATGCATCCTCCAACGGCGGCAAGCTCCCTGTGACAATCTACGAA
AGCGTATACGAGGGCGAAAATGCGACAGAGAACAGCAAGACAATGCAGGT
TGATGGAGAGGAACAATCCCTAACGATTCGCTTCCGAGAACTGCCCTACT
CCGTCGAAACGGGGGAAGCCGAGATGATTGGCGTCGACACAGTAGCAAGG
ACAGCCAGAAACGCCGCCGCAGACACACAAGGCACGGCCTCTCTCACAAA
ACAATCAGCCGGCAAAGAACCCAGCAAGGATCAGTCAGAAGTGCTCTCCC
CCGAGGAAGAAGAACATGACATCTCCGCCAGTCTCCCCGACGATAAGTTC
CAGACTATCACTGCTTCCTCCTATCATTTCACCTCGGTATACCATCTCCT
CCTTCAAGGACATATTGTTCATCATGTCTGATCAGCCGGAATCCCTCCTA
TCTCCGAAGAACTCCGACTCCGGCCTCCATATCCAGCTCCACCCTCTGAT
CCTCCTGACCATCTCAGACCACATCACCCGCCATGCCGCCCGCTCTCAGC
AAGGACCTATAGTGGGAGCGCTTCTAGGCCAGCAGAACGGACGCGAAATC
ACCTTGGAACACGTCTTTGAGTGTATTGTGAACGAGGGCCCCAATGGAGA
TCTGCAGATTCCGCAGGACTGGTTCGTAGAGAGAGTCAAGCAATTAATCG
CCAGCCTCACCACCCGCCTCAACGCCATCAAGACCCTCGAATCCCGTATC
TCCCTCATCAAATCCTACGTCGCGAGCATCTCCACCTCCGACCCAGAAAC
CCCCAACTCAACAACAACCCTCTCCCACCCCATCCTCCGCAACATCAACG
CTCTCCTCTCGCACCTCTCCCTTCTCACCCCTGATGAACAAAGCGCCTTC
ACAGCCGAAGCCATCGCCCAGAGCAACGACGTCCACCTCGTCTCCCTATT
AGGACAACTCGGCCAGAGCATCAGCGCGATGCGCGAGCTCGGGAAACGAA
CTGCGCTGATGAACAGTGTCAGACGGACGATGATGTCGCGGAAAACGCAA
CAATTATCTTGGCAGAATCGGTTCACTGAACCTTTTTCGACTGGGGATGG
GGTGAGTCATGGATAGTCAAAGATGTACACAAAGCTCCTGCCCTTGACCT
TGTCGGCTGGTGGTCAACTGCTCCCCCGTCCGGCCCCAACACCGTCCACC
TCCCAATCCATCGCCAGATCCTCCACAACCACAACGAGTCCGCCGTGTTC
CTCGCGTTCCACCCATCCCTGGTACAAGATGCATCCTCCAACGGCGGCAA
GCTCCCTGTGACAATCTACGAAAGCGTATACGAGGGCGAAAATGCGACAG
AGAACAGCAAGACAATGCAGGTTGATGGAGAGGAACAATCCCTAACGATT
CGCTTCCGAGAACTGCCCTACTCCGTCGAAACGGGGGAAGCCGAGATGAT
TGGCGTCGACACAGTAGCAAGGACAGCCAGAAACGCCGCCGCAGACACAC
AAGGCACGGCCTCTCTCACAAAACAATCAGCCGGCAAAGAACCCAGCAAG
GATCAGTCAGAAGTGCTCTCCCCCGAGGAAGAAGAACATGACATCTCCGC
CAGTCTCCCCGACGATAAGTTCCAGACTATCACTGCTTCCTCCTATCATT
TCACCTCGGTATACCATCTCCTCCTTCAAGGACATATTGTTCATCATGTC
TGATCAGCCGGAATCCCTCCTATCTCCGAAGAACTCCGACTCCGGCCTCC
ATATCCAGCTCCACCCTCTGATCCTCCTGACCATCTCAGACCACATCACC
CGCCATGCCGCCCGCTCTCAGCAAGGACCTATAGTGGGAGCGCTTCTAGG
CCAGCAGAACGGACGCGAAATCACCTTGGAACACGTCTTTGAGTGTATTG
TGAACGAGGGCCCCAATGGAGATCTGCAGATTCCGCAGGACTGGTTCGTA
GAGAGAGTCAAGCAAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0008180COP9 signalosome
Vocabulary: Biological Process
TermDefinition
GO:0000338protein deneddylation
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006825KJC3_006825Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006825-T1KJC3_006825-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006825-T1.cdsKJC3_006825-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006825-T1.utr3p1KJC3_006825-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006825-T1.exon5KJC3_006825-T1.exon5Aspergillus niger KJC3exon
KJC3_006825-T1.exon4KJC3_006825-T1.exon4Aspergillus niger KJC3exon
KJC3_006825-T1.exon3KJC3_006825-T1.exon3Aspergillus niger KJC3exon
KJC3_006825-T1.exon2KJC3_006825-T1.exon2Aspergillus niger KJC3exon
KJC3_006825-T1.exon1KJC3_006825-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006825-T1.utr5p3KJC3_006825-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_006825-T1.utr5p2KJC3_006825-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006825-T1.utr5p1KJC3_006825-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteMEROPS:MER0030137
DBxrefInterPro:IPR033859
DBxrefInterPro:IPR037518
DBxrefInterPro:IPR024969
DBxrefInterPro:IPR000555
DBxrefPFAM:PF13012
DBxrefPFAM:PF01398
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:564642..567214 -
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