You are here

Home

KJC3_006912-T1, KJC3_006912-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006912-T1
Unique NameKJC3_006912-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:831118..834073-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006912-T1 ID=KJC3_006912-T1|Name=KJC3_006912-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2956bp|location=Sequence derived from alignment at ch5:831118..834073- (Aspergillus niger KJC3)
GTAGTATTATTGTTTTGGTCAATTTCTTATTTAGGACTGGTGGTCATTGA
ACGAAGATATATTTCCATCGGTAACTTTCCCCGGATGTCAATAGTAACGG
CAATTGCCTGATTGAAAGGTACAAAACTACTAGTACTTTACTTTCAATAC
ACCCTATACCATGGACTGGCTGCCTACAATTCCTGGGCAGCATTCCAAGC
GATGATATTTTTTGGAGGATTAATTTAGCTACATTGAAAGTTAAGTAGCT
GAAGAGAAAAGAAAAAGCATTTCGAAGTATATATACTCTCCACTTACGTG
CAAGAGTGGCTGAGTACCTTCAAAACAAAACAAAACTAGCGAGGGGTTTG
TGGCTGAGTGGCTGGAGACAGTGAGTGACCGCCTCCCGCCAGCTCCTTCT
CTCCCTCCTCCGGCGTCATGATTGCCATCATCATCGCTTGCTGCTCTTCC
GGTTTGTTCCCAGACCGTTGATTGTTTCTTCCCTCTCTCCTTTCCCCTTA
TCAAAGTACATCAAGAGGTGCTTCTAGCTCCCCCGTGTATCCTTTCATCT
ACATCGCCGTGCTCCCCTCCAAACCACCCCACCGAGCCATCTCTCATCCA
TCCGGTGGCGCAAGATGAAGCTCACGTTTAAGGTACGCGTGATTCCTACC
CCACCCCCTCTACTTATCCTCGAGTCTGACATGTTCGTTCTCTCCCTCTA
GGACCTGAAACAACAAAAGTTTGTAATCGATGCAGAGCCCTCAGAGACGG
TAGGCGGTTCCTTTCTCTCAGCGTCGTGACTTTGCCGGCGTCAGTGCGGG
GCTAAATGAATTATCCGACAGGTCGGGCAAGTGAAGGAAAAGATCTCCAA
GGAGAAGGGATGGGAGGTTCCTCAGCTTAAGCTCATCTACTCTGGTAAGT
AAAGCAACTTTGGCGTCCTACACTTGCTGCTCTATTTCCGATAGCCTTCT
GCCACTCTGTTTGGCCGGTATTTCAGCGCTGACCGTTCTTCCCCCCCAAC
AGGAAAGATCCTTCAGGATGACAAGACGATCGAGTCATACAACATCGAGG
AGAAGGGGTTCATAGTGTGCATGGTCTCTAAGGTACGTACACCCTAGGCC
AAGGATATATTTCGTATGAATGAAGGACTAAATTCTCGTGGTGTAGCCCA
AGGCTACTTCCTCCGGCACCTCGTCACAAGCGCCCTCCACCCCATCCAGA
GCCGTCACCTCTACCCCTGCTGCGCCTCCCGCCCCAGCCCCTTCTGCGGC
TTCCACTACACCGGCTGTTCCTTCGACTCCCTCCCCGGCCGCCGCGGGGA
CCTCCCAGGCACAGGGCTCCGCATTCAATGACCCCTCCGCATTGCTGAGT
GGCACTCAGAGCGAGGCTGTCGTGGCTCAGATGGAGGCAATGGGTTTCGC
CCGGAGTGATGTAAACCGTGCAATGAGGGCTGCTTTCTTTAACCCCGATC
GTGCCATCGAATACCTTTTGAATGTGAGTTCATGGCGCTGGTAGCCGGCT
ATTGGGTTGCCCGATCTTGCGCTGACTTTAAGCAGGGTATTCCGGAAAAC
ATCCAACAGGAACAGCAGCAGCAAGCCGCCGCCGCTAGCGCACCCCAGTC
TGCTGCTCCCGAAAGCGCCCCGTCCGCTGGTGACGACGAACCGGTCAACC
TGTTCGAAGCTGCTGCTCAGGCTGGTGGCCAGGAGGGAGGAGGCCGAGGA
GCTCGTGCTGCCGGTGGTGCTGAACTCCCGAGCCTCGAATTTCTGCGGAA
TAACCCCCACTTCCAGCAGCTTCGTCAGTTGGTCCAACAACAACCACAAA
TGCTCGAACCCATCCTCCAACAAGTCGCCGCTGGAAACCCCCAAATTGCG
CAGCTCATTGGCCAAAATGAGGAACAGTTCCTACAGCTCCTGAGTGAGGA
GCCTGATGATGATGAGGCGCTCCCCCCTGGTACGACTCAAATTCATGTTA
CGGAAGAAGAGAGAGATGCCATTGAACGTGTGCGTATAATATACTCTGGT
AATTCCTTGTGGAAATGTAGCTGACATGTTTCTGCTAGCTCTGCCGGCTT
GGATTCTCTCGGGACTTGGTCATTCAAGCTTATTTCGCTTGCGATAAGAA
TGAAGAGCTCGCAGCTAACTATCTGTTTGAGAACCCCGACGATCCCGAAG
ATATGTGATTCAAGCGCGGCCTCGTGTATTCCCATGTGTTTGAGATGCTG
CTCACTGCTTTGAATCATGTTCTCCTTTCCTAATTAACGTCGCTATGTAC
CCACATTTCTCCTCTTCTCCTTCGCCTCAAGATCTCATGAGAATCGACGA
TTACGTAGATCAGAAAATGGCTTCAACCCATGCCTCTGGCTTTCGAACCC
CAAGCCAGGCTGGAGCGTGTCCTTCTATTCTTGTCGGGTCCGCCCCCCCG
ATAGTACTTATCTTTCACACGCTCGCCTTACCACTGGACGATATATTAGT
AAGCTAGTGTCGGACGATGCTTCCATTTTCGCGATATTCTCATGTTTCTA
TTCTTCTATTATTTCCCTTCTATTCTATTTCCTTCTCCGACTCCCCTCAA
TATGACGTTCCAGTCATGTATCTAGTTAATGGAAACGAAAACAAGGCGTT
GCGCTCCCCTTGCCTCAGTCATTCTACCCACCATCTATCGATAACAAGGA
AATATCTATTTGACCCGGAGTTCCAAAAGTCAAGACTCCTGATTTATTCT
TCTATTGCAGGACATACTTATATGTTCCACTCCGTAGAGGGCTAGACGAG
GGAAGAAAAGAAGCAAGGGGAGCCGAGGATCCCGAACTCATGACCAAATT
GACTGATTGACTAACTGACTAATTAATTGTCCTGATCTGCGCTTGATCTG
ATGACATTGGTACATAAGTTGGCACGGGATGACTGGGTGCATGCGTAACT
ACTAATCTGGAATGTTGTTATATTTTGTACTAGATATATGTGTTGGTTAT
CGGGGG
back to top

Coding sequence (CDS) from alignment at ch5:831118..834073-

>KJC3_006912-T1 ID=KJC3_006912-T1|Name=KJC3_006912-T1|organism=Aspergillus niger KJC3|type=CDS|length=7770bp|location=Sequence derived from alignment at ch5:831118..834073- (Aspergillus niger KJC3)
CTCTGCCGGCTTGGATTCTCTCGGGACTTGGTCATTCAAGCTTATTTCGC
TTGCGATAAGAATGAAGAGCTCGCAGCTAACTATCTGTTTGAGAACCCCG
ACGATCCCGAAGATATGTGAGGTATTCCGGAAAACATCCAACAGGAACAG
CAGCAGCAAGCCGCCGCCGCTAGCGCACCCCAGTCTGCTGCTCCCGAAAG
CGCCCCGTCCGCTGGTGACGACGAACCGGTCAACCTGTTCGAAGCTGCTG
CTCAGGCTGGTGGCCAGGAGGGAGGAGGCCGAGGAGCTCGTGCTGCCGGT
GGTGCTGAACTCCCGAGCCTCGAATTTCTGCGGAATAACCCCCACTTCCA
GCAGCTTCGTCAGTTGGTCCAACAACAACCACAAATGCTCGAACCCATCC
TCCAACAAGTCGCCGCTGGAAACCCCCAAATTGCGCAGCTCATTGGCCAA
AATGAGGAACAGTTCCTACAGCTCCTGAGTGAGGAGCCTGATGATGATGA
GGCGCTCCCCCCTGGTACGACTCAAATTCATGTTACGGAAGAAGAGAGAG
ATGCCATTGAACGTCCCAAGGCTACTTCCTCCGGCACCTCGTCACAAGCG
CCCTCCACCCCATCCAGAGCCGTCACCTCTACCCCTGCTGCGCCTCCCGC
CCCAGCCCCTTCTGCGGCTTCCACTACACCGGCTGTTCCTTCGACTCCCT
CCCCGGCCGCCGCGGGGACCTCCCAGGCACAGGGCTCCGCATTCAATGAC
CCCTCCGCATTGCTGAGTGGCACTCAGAGCGAGGCTGTCGTGGCTCAGAT
GGAGGCAATGGGTTTCGCCCGGAGTGATGTAAACCGTGCAATGAGGGCTG
CTTTCTTTAACCCCGATCGTGCCATCGAATACCTTTTGAATGAAAGATCC
TTCAGGATGACAAGACGATCGAGTCATACAACATCGAGGAGAAGGGGTTC
ATAGTGTGCATGGTCTCTAAGGTCGGGCAAGTGAAGGAAAAGATCTCCAA
GGAGAAGGGATGGGAGGTTCCTCAGCTTAAGCTCATCTACTCTGGACCTG
AAACAACAAAAGTTTGTAATCGATGCAGAGCCCTCAGAGACGATGAAGCT
CACGTTTAAGCTCTGCCGGCTTGGATTCTCTCGGGACTTGGTCATTCAAG
CTTATTTCGCTTGCGATAAGAATGAAGAGCTCGCAGCTAACTATCTGTTT
GAGAACCCCGACGATCCCGAAGATATGTGAGGTATTCCGGAAAACATCCA
ACAGGAACAGCAGCAGCAAGCCGCCGCCGCTAGCGCACCCCAGTCTGCTG
CTCCCGAAAGCGCCCCGTCCGCTGGTGACGACGAACCGGTCAACCTGTTC
GAAGCTGCTGCTCAGGCTGGTGGCCAGGAGGGAGGAGGCCGAGGAGCTCG
TGCTGCCGGTGGTGCTGAACTCCCGAGCCTCGAATTTCTGCGGAATAACC
CCCACTTCCAGCAGCTTCGTCAGTTGGTCCAACAACAACCACAAATGCTC
GAACCCATCCTCCAACAAGTCGCCGCTGGAAACCCCCAAATTGCGCAGCT
CATTGGCCAAAATGAGGAACAGTTCCTACAGCTCCTGAGTGAGGAGCCTG
ATGATGATGAGGCGCTCCCCCCTGGTACGACTCAAATTCATGTTACGGAA
GAAGAGAGAGATGCCATTGAACGTCCCAAGGCTACTTCCTCCGGCACCTC
GTCACAAGCGCCCTCCACCCCATCCAGAGCCGTCACCTCTACCCCTGCTG
CGCCTCCCGCCCCAGCCCCTTCTGCGGCTTCCACTACACCGGCTGTTCCT
TCGACTCCCTCCCCGGCCGCCGCGGGGACCTCCCAGGCACAGGGCTCCGC
ATTCAATGACCCCTCCGCATTGCTGAGTGGCACTCAGAGCGAGGCTGTCG
TGGCTCAGATGGAGGCAATGGGTTTCGCCCGGAGTGATGTAAACCGTGCA
ATGAGGGCTGCTTTCTTTAACCCCGATCGTGCCATCGAATACCTTTTGAA
TGAAAGATCCTTCAGGATGACAAGACGATCGAGTCATACAACATCGAGGA
GAAGGGGTTCATAGTGTGCATGGTCTCTAAGGTCGGGCAAGTGAAGGAAA
AGATCTCCAAGGAGAAGGGATGGGAGGTTCCTCAGCTTAAGCTCATCTAC
TCTGGACCTGAAACAACAAAAGTTTGTAATCGATGCAGAGCCCTCAGAGA
CGATGAAGCTCACGTTTAAGCTCTGCCGGCTTGGATTCTCTCGGGACTTG
GTCATTCAAGCTTATTTCGCTTGCGATAAGAATGAAGAGCTCGCAGCTAA
CTATCTGTTTGAGAACCCCGACGATCCCGAAGATATGTGAGGTATTCCGG
AAAACATCCAACAGGAACAGCAGCAGCAAGCCGCCGCCGCTAGCGCACCC
CAGTCTGCTGCTCCCGAAAGCGCCCCGTCCGCTGGTGACGACGAACCGGT
CAACCTGTTCGAAGCTGCTGCTCAGGCTGGTGGCCAGGAGGGAGGAGGCC
GAGGAGCTCGTGCTGCCGGTGGTGCTGAACTCCCGAGCCTCGAATTTCTG
CGGAATAACCCCCACTTCCAGCAGCTTCGTCAGTTGGTCCAACAACAACC
ACAAATGCTCGAACCCATCCTCCAACAAGTCGCCGCTGGAAACCCCCAAA
TTGCGCAGCTCATTGGCCAAAATGAGGAACAGTTCCTACAGCTCCTGAGT
GAGGAGCCTGATGATGATGAGGCGCTCCCCCCTGGTACGACTCAAATTCA
TGTTACGGAAGAAGAGAGAGATGCCATTGAACGTCCCAAGGCTACTTCCT
CCGGCACCTCGTCACAAGCGCCCTCCACCCCATCCAGAGCCGTCACCTCT
ACCCCTGCTGCGCCTCCCGCCCCAGCCCCTTCTGCGGCTTCCACTACACC
GGCTGTTCCTTCGACTCCCTCCCCGGCCGCCGCGGGGACCTCCCAGGCAC
AGGGCTCCGCATTCAATGACCCCTCCGCATTGCTGAGTGGCACTCAGAGC
GAGGCTGTCGTGGCTCAGATGGAGGCAATGGGTTTCGCCCGGAGTGATGT
AAACCGTGCAATGAGGGCTGCTTTCTTTAACCCCGATCGTGCCATCGAAT
ACCTTTTGAATGAAAGATCCTTCAGGATGACAAGACGATCGAGTCATACA
ACATCGAGGAGAAGGGGTTCATAGTGTGCATGGTCTCTAAGGTCGGGCAA
GTGAAGGAAAAGATCTCCAAGGAGAAGGGATGGGAGGTTCCTCAGCTTAA
GCTCATCTACTCTGGACCTGAAACAACAAAAGTTTGTAATCGATGCAGAG
CCCTCAGAGACGATGAAGCTCACGTTTAAGCTCTGCCGGCTTGGATTCTC
TCGGGACTTGGTCATTCAAGCTTATTTCGCTTGCGATAAGAATGAAGAGC
TCGCAGCTAACTATCTGTTTGAGAACCCCGACGATCCCGAAGATATGTGA
GGTATTCCGGAAAACATCCAACAGGAACAGCAGCAGCAAGCCGCCGCCGC
TAGCGCACCCCAGTCTGCTGCTCCCGAAAGCGCCCCGTCCGCTGGTGACG
ACGAACCGGTCAACCTGTTCGAAGCTGCTGCTCAGGCTGGTGGCCAGGAG
GGAGGAGGCCGAGGAGCTCGTGCTGCCGGTGGTGCTGAACTCCCGAGCCT
CGAATTTCTGCGGAATAACCCCCACTTCCAGCAGCTTCGTCAGTTGGTCC
AACAACAACCACAAATGCTCGAACCCATCCTCCAACAAGTCGCCGCTGGA
AACCCCCAAATTGCGCAGCTCATTGGCCAAAATGAGGAACAGTTCCTACA
GCTCCTGAGTGAGGAGCCTGATGATGATGAGGCGCTCCCCCCTGGTACGA
CTCAAATTCATGTTACGGAAGAAGAGAGAGATGCCATTGAACGTCCCAAG
GCTACTTCCTCCGGCACCTCGTCACAAGCGCCCTCCACCCCATCCAGAGC
CGTCACCTCTACCCCTGCTGCGCCTCCCGCCCCAGCCCCTTCTGCGGCTT
CCACTACACCGGCTGTTCCTTCGACTCCCTCCCCGGCCGCCGCGGGGACC
TCCCAGGCACAGGGCTCCGCATTCAATGACCCCTCCGCATTGCTGAGTGG
CACTCAGAGCGAGGCTGTCGTGGCTCAGATGGAGGCAATGGGTTTCGCCC
GGAGTGATGTAAACCGTGCAATGAGGGCTGCTTTCTTTAACCCCGATCGT
GCCATCGAATACCTTTTGAATGAAAGATCCTTCAGGATGACAAGACGATC
GAGTCATACAACATCGAGGAGAAGGGGTTCATAGTGTGCATGGTCTCTAA
GGTCGGGCAAGTGAAGGAAAAGATCTCCAAGGAGAAGGGATGGGAGGTTC
CTCAGCTTAAGCTCATCTACTCTGGACCTGAAACAACAAAAGTTTGTAAT
CGATGCAGAGCCCTCAGAGACGATGAAGCTCACGTTTAAGCTCTGCCGGC
TTGGATTCTCTCGGGACTTGGTCATTCAAGCTTATTTCGCTTGCGATAAG
AATGAAGAGCTCGCAGCTAACTATCTGTTTGAGAACCCCGACGATCCCGA
AGATATGTGAGGTATTCCGGAAAACATCCAACAGGAACAGCAGCAGCAAG
CCGCCGCCGCTAGCGCACCCCAGTCTGCTGCTCCCGAAAGCGCCCCGTCC
GCTGGTGACGACGAACCGGTCAACCTGTTCGAAGCTGCTGCTCAGGCTGG
TGGCCAGGAGGGAGGAGGCCGAGGAGCTCGTGCTGCCGGTGGTGCTGAAC
TCCCGAGCCTCGAATTTCTGCGGAATAACCCCCACTTCCAGCAGCTTCGT
CAGTTGGTCCAACAACAACCACAAATGCTCGAACCCATCCTCCAACAAGT
CGCCGCTGGAAACCCCCAAATTGCGCAGCTCATTGGCCAAAATGAGGAAC
AGTTCCTACAGCTCCTGAGTGAGGAGCCTGATGATGATGAGGCGCTCCCC
CCTGGTACGACTCAAATTCATGTTACGGAAGAAGAGAGAGATGCCATTGA
ACGTCCCAAGGCTACTTCCTCCGGCACCTCGTCACAAGCGCCCTCCACCC
CATCCAGAGCCGTCACCTCTACCCCTGCTGCGCCTCCCGCCCCAGCCCCT
TCTGCGGCTTCCACTACACCGGCTGTTCCTTCGACTCCCTCCCCGGCCGC
CGCGGGGACCTCCCAGGCACAGGGCTCCGCATTCAATGACCCCTCCGCAT
TGCTGAGTGGCACTCAGAGCGAGGCTGTCGTGGCTCAGATGGAGGCAATG
GGTTTCGCCCGGAGTGATGTAAACCGTGCAATGAGGGCTGCTTTCTTTAA
CCCCGATCGTGCCATCGAATACCTTTTGAATGAAAGATCCTTCAGGATGA
CAAGACGATCGAGTCATACAACATCGAGGAGAAGGGGTTCATAGTGTGCA
TGGTCTCTAAGGTCGGGCAAGTGAAGGAAAAGATCTCCAAGGAGAAGGGA
TGGGAGGTTCCTCAGCTTAAGCTCATCTACTCTGGACCTGAAACAACAAA
AGTTTGTAATCGATGCAGAGCCCTCAGAGACGATGAAGCTCACGTTTAAG
CTCTGCCGGCTTGGATTCTCTCGGGACTTGGTCATTCAAGCTTATTTCGC
TTGCGATAAGAATGAAGAGCTCGCAGCTAACTATCTGTTTGAGAACCCCG
ACGATCCCGAAGATATGTGAGGTATTCCGGAAAACATCCAACAGGAACAG
CAGCAGCAAGCCGCCGCCGCTAGCGCACCCCAGTCTGCTGCTCCCGAAAG
CGCCCCGTCCGCTGGTGACGACGAACCGGTCAACCTGTTCGAAGCTGCTG
CTCAGGCTGGTGGCCAGGAGGGAGGAGGCCGAGGAGCTCGTGCTGCCGGT
GGTGCTGAACTCCCGAGCCTCGAATTTCTGCGGAATAACCCCCACTTCCA
GCAGCTTCGTCAGTTGGTCCAACAACAACCACAAATGCTCGAACCCATCC
TCCAACAAGTCGCCGCTGGAAACCCCCAAATTGCGCAGCTCATTGGCCAA
AATGAGGAACAGTTCCTACAGCTCCTGAGTGAGGAGCCTGATGATGATGA
GGCGCTCCCCCCTGGTACGACTCAAATTCATGTTACGGAAGAAGAGAGAG
ATGCCATTGAACGTCCCAAGGCTACTTCCTCCGGCACCTCGTCACAAGCG
CCCTCCACCCCATCCAGAGCCGTCACCTCTACCCCTGCTGCGCCTCCCGC
CCCAGCCCCTTCTGCGGCTTCCACTACACCGGCTGTTCCTTCGACTCCCT
CCCCGGCCGCCGCGGGGACCTCCCAGGCACAGGGCTCCGCATTCAATGAC
CCCTCCGCATTGCTGAGTGGCACTCAGAGCGAGGCTGTCGTGGCTCAGAT
GGAGGCAATGGGTTTCGCCCGGAGTGATGTAAACCGTGCAATGAGGGCTG
CTTTCTTTAACCCCGATCGTGCCATCGAATACCTTTTGAATGAAAGATCC
TTCAGGATGACAAGACGATCGAGTCATACAACATCGAGGAGAAGGGGTTC
ATAGTGTGCATGGTCTCTAAGGTCGGGCAAGTGAAGGAAAAGATCTCCAA
GGAGAAGGGATGGGAGGTTCCTCAGCTTAAGCTCATCTACTCTGGACCTG
AAACAACAAAAGTTTGTAATCGATGCAGAGCCCTCAGAGACGATGAAGCT
CACGTTTAAGCTCTGCCGGCTTGGATTCTCTCGGGACTTGGTCATTCAAG
CTTATTTCGCTTGCGATAAGAATGAAGAGCTCGCAGCTAACTATCTGTTT
GAGAACCCCGACGATCCCGAAGATATGTGAGGTATTCCGGAAAACATCCA
ACAGGAACAGCAGCAGCAAGCCGCCGCCGCTAGCGCACCCCAGTCTGCTG
CTCCCGAAAGCGCCCCGTCCGCTGGTGACGACGAACCGGTCAACCTGTTC
GAAGCTGCTGCTCAGGCTGGTGGCCAGGAGGGAGGAGGCCGAGGAGCTCG
TGCTGCCGGTGGTGCTGAACTCCCGAGCCTCGAATTTCTGCGGAATAACC
CCCACTTCCAGCAGCTTCGTCAGTTGGTCCAACAACAACCACAAATGCTC
GAACCCATCCTCCAACAAGTCGCCGCTGGAAACCCCCAAATTGCGCAGCT
CATTGGCCAAAATGAGGAACAGTTCCTACAGCTCCTGAGTGAGGAGCCTG
ATGATGATGAGGCGCTCCCCCCTGGTACGACTCAAATTCATGTTACGGAA
GAAGAGAGAGATGCCATTGAACGTCCCAAGGCTACTTCCTCCGGCACCTC
GTCACAAGCGCCCTCCACCCCATCCAGAGCCGTCACCTCTACCCCTGCTG
CGCCTCCCGCCCCAGCCCCTTCTGCGGCTTCCACTACACCGGCTGTTCCT
TCGACTCCCTCCCCGGCCGCCGCGGGGACCTCCCAGGCACAGGGCTCCGC
ATTCAATGACCCCTCCGCATTGCTGAGTGGCACTCAGAGCGAGGCTGTCG
TGGCTCAGATGGAGGCAATGGGTTTCGCCCGGAGTGATGTAAACCGTGCA
ATGAGGGCTGCTTTCTTTAACCCCGATCGTGCCATCGAATACCTTTTGAA
TGAAAGATCCTTCAGGATGACAAGACGATCGAGTCATACAACATCGAGGA
GAAGGGGTTCATAGTGTGCATGGTCTCTAAGGTCGGGCAAGTGAAGGAAA
AGATCTCCAAGGAGAAGGGATGGGAGGTTCCTCAGCTTAAGCTCATCTAC
TCTGGACCTGAAACAACAAAAGTTTGTAATCGATGCAGAGCCCTCAGAGA
CGATGAAGCTCACGTTTAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003684damaged DNA binding
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0043161proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0006289nucleotide-excision repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006912KJC3_006912Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006912-T1KJC3_006912-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006912-T1.cdsKJC3_006912-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006912-T1.utr3p1KJC3_006912-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006912-T1.exon7KJC3_006912-T1.exon7Aspergillus niger KJC3exon
KJC3_006912-T1.exon6KJC3_006912-T1.exon6Aspergillus niger KJC3exon
KJC3_006912-T1.exon5KJC3_006912-T1.exon5Aspergillus niger KJC3exon
KJC3_006912-T1.exon4KJC3_006912-T1.exon4Aspergillus niger KJC3exon
KJC3_006912-T1.exon3KJC3_006912-T1.exon3Aspergillus niger KJC3exon
KJC3_006912-T1.exon2KJC3_006912-T1.exon2Aspergillus niger KJC3exon
KJC3_006912-T1.exon1KJC3_006912-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006912-T1.utr5p1KJC3_006912-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264CST
DBxrefInterPro:IPR009060
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR036353
DBxrefInterPro:IPR015360
DBxrefInterPro:IPR006636
DBxrefInterPro:IPR000626
DBxrefInterPro:IPR015940
DBxrefInterPro:IPR004806
DBxrefPFAM:PF09280
DBxrefPFAM:PF00240
DBxrefPFAM:PF00627
DBxrefPFAM:PF11976
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:831118..834073 -
Powered by Drupal