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KJC3_006915-T1, KJC3_006915-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006915-T1
Unique NameKJC3_006915-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:844045..845658+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006915-T1 ID=KJC3_006915-T1|Name=KJC3_006915-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1614bp|location=Sequence derived from alignment at ch5:844045..845658+ (Aspergillus niger KJC3)
GTGCTTTCTAAATTGCCTGCATCTTTTGGCTGATCGAGCCCCGTCTCTCT
GTCAATTGCGAATCGCAAAGTCCTGTTCTAGCACTTTGTGTCCTTCTCTC
GCCGTTTTCCCCGCCACGAGCCTCTTCCCGACAGGTTCTGCCTTGCCCTC
ACCCCGCCTTCACCACTTCCTCGAATCTCTCTCCCCTCAGCGATCTCTTC
TCTCCCTCTCACGGGCACTCGATCAACTTCCTCGCTCTCTCGAAGCGAAG
ATATAGAATTTTTCTATCTTCACTATTTTCACCTCCGGTAGTCCGACTCC
GCCAGAAAGAATCATGGCGGTCCGCGCGCAGTTCGAGAACTCCAACGAGT
GAGACGCACCCCGGAGAATTTTCTGCTGGCCTGCTTGACCATGCGGCCCA
GACCTCGCAGCTTCTGGAATCTTAACTAACGTATTTCTTGTTTTCCAGAG
TCGGTGTTTTCTCCCGTCTCACCAACTCGTACGCTATTGTTGCCATTGGC
GCCTCCGAGAACTTCTACAGGTGCTTATATACCCGTTTCTGCCAGAACCA
CAAACCAGTCCCATTAACGCTCCTTCCAGTGTATTCGAGGCCGAATTGCA
AGATGTCATTCCCATCTGCCACGCAACCATTGCCGGAACCCGCATCGTTG
GCCGTCTGACGGCAGGGTATGTCTAGATCCGATATCCATTTGGATCTCTG
TATCAACCCCGCTGACCATCTTGCCCCCAATATCAGAAACCGTAATGGTC
TCCTCGTCCCCACCACCACGACAGACCAAGAGCTTCAACATCTCCGGAAT
ACGCTACCCGAATCGGTAAAGATTCAACGTATAGAGGAACGTCTATCGGC
TCTGGGGAACGTCATCTGCTGCAATGACCATGTTGCGCTGATCCACCCGG
ATCTCGAGCGGGAAACCGAAGAGATGTATGTCGTGCTGCCAATATCTGCA
AGTACTGCGCTCAATGCTAACATGCTAAACCAACAGCATCGCCGATGTCC
TCGGTGTCGAAGTCTTCCGTCAAACCGTCGCCGATAACGTCCTGACTGGC
TCCTACATGGCCCTCTCCAACCAAGGTGGTATCGTCCACCCCAAGACCTC
CATCCGTGACCAGGATGAACTTTCCTCCCTCCTGCAAGTGCCCCTCGTCG
CTGGTAGTGTCAACCGCGGTAGCCCCGTCGTCGGTGCCGGCATGGTCGTG
AACGACTGGCTCGCTGTCACGGGTCTGGACACGACAGCCACGGAATTGAG
TGTCATTGAAAGTGTCTTCCGTCTGGGTGAGATGGGTCCCCGTGGTGTTG
GAATGGGCGACGCCAACAAGGAGAGTATTGTGGAGAGTTTCTACTAGAGG
GTTTCACATTTTCTTTCATCATCACGCTGTTTCCTTTTTTTTTTTTCTTT
TTTCTTTCTCGAACATACATGAATATCCTTATTGTGCTATGAATGAATGG
AATGGGTAGAATATCCGGGGGTGTGTCTGTGGATTGACTGGACTCTATTT
TCTTTCCAAAAACCTATTATATTATACTCGTAGAGTAATTGGTACTAACT
ACCTACATAGAGAACCGACAACCTAGATGTCATCACACGAAAACAATTGA
ATCCCTCCATAACC
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Coding sequence (CDS) from alignment at ch5:844045..845658+

>KJC3_006915-T1 ID=KJC3_006915-T1|Name=KJC3_006915-T1|organism=Aspergillus niger KJC3|type=CDS|length=3720bp|location=Sequence derived from alignment at ch5:844045..845658+ (Aspergillus niger KJC3)
ATGGCGGTCCGCGCGCAGTTCGAGAACTCCAACGAAGTCGGTGTTTTCTC
CCGTCTCACCAACTCGTACGCTATTGTTGCCATTGGCGCCTCCGAGAACT
TCTACAGTGTATTCGAGGCCGAATTGCAAGATGTCATTCCCATCTGCCAC
GCAACCATTGCCGGAACCCGCATCGTTGGCCGTCTGACGGCAGGAAACCG
TAATGGTCTCCTCGTCCCCACCACCACGACAGACCAAGAGCTTCAACATC
TCCGGAATACGCTACCCGAATCGGTAAAGATTCAACGTATAGAGGAACGT
CTATCGGCTCTGGGGAACGTCATCTGCTGCAATGACCATGTTGCGCTGAT
CCACCCGGATCTCGAGCGGGAAACCGAAGAGATCATCGCCGATGTCCTCG
GTGTCGAAGTCTTCCGTCAAACCGTCGCCGATAACGTCCTGACTGGCTCC
TACATGGCCCTCTCCAACCAAGGTGGTATCGTCCACCCCAAGACCTCCAT
CCGTGACCAGGATGAACTTTCCTCCCTCCTGCAAGTGCCCCTCGTCGCTG
GTAGTGTCAACCGCGGTAGCCCCGTCGTCGGTGCCGGCATGGTCGTGAAC
GACTGGCTCGCTGTCACGGGTCTGGACACGACAGCCACGGAATTGAGTGT
CATTGAAAGTGTCTTCCGTCTGGGTGAGATGGGTCCCCGTGGTGTTGGAA
TGGGCGACGCCAACAAGGAGAGTATTGTGGAGAGTTTCTACTAGATGGCG
GTCCGCGCGCAGTTCGAGAACTCCAACGAAGTCGGTGTTTTCTCCCGTCT
CACCAACTCGTACGCTATTGTTGCCATTGGCGCCTCCGAGAACTTCTACA
GTGTATTCGAGGCCGAATTGCAAGATGTCATTCCCATCTGCCACGCAACC
ATTGCCGGAACCCGCATCGTTGGCCGTCTGACGGCAGGAAACCGTAATGG
TCTCCTCGTCCCCACCACCACGACAGACCAAGAGCTTCAACATCTCCGGA
ATACGCTACCCGAATCGGTAAAGATTCAACGTATAGAGGAACGTCTATCG
GCTCTGGGGAACGTCATCTGCTGCAATGACCATGTTGCGCTGATCCACCC
GGATCTCGAGCGGGAAACCGAAGAGATCATCGCCGATGTCCTCGGTGTCG
AAGTCTTCCGTCAAACCGTCGCCGATAACGTCCTGACTGGCTCCTACATG
GCCCTCTCCAACCAAGGTGGTATCGTCCACCCCAAGACCTCCATCCGTGA
CCAGGATGAACTTTCCTCCCTCCTGCAAGTGCCCCTCGTCGCTGGTAGTG
TCAACCGCGGTAGCCCCGTCGTCGGTGCCGGCATGGTCGTGAACGACTGG
CTCGCTGTCACGGGTCTGGACACGACAGCCACGGAATTGAGTGTCATTGA
AAGTGTCTTCCGTCTGGGTGAGATGGGTCCCCGTGGTGTTGGAATGGGCG
ACGCCAACAAGGAGAGTATTGTGGAGAGTTTCTACTAGATGGCGGTCCGC
GCGCAGTTCGAGAACTCCAACGAAGTCGGTGTTTTCTCCCGTCTCACCAA
CTCGTACGCTATTGTTGCCATTGGCGCCTCCGAGAACTTCTACAGTGTAT
TCGAGGCCGAATTGCAAGATGTCATTCCCATCTGCCACGCAACCATTGCC
GGAACCCGCATCGTTGGCCGTCTGACGGCAGGAAACCGTAATGGTCTCCT
CGTCCCCACCACCACGACAGACCAAGAGCTTCAACATCTCCGGAATACGC
TACCCGAATCGGTAAAGATTCAACGTATAGAGGAACGTCTATCGGCTCTG
GGGAACGTCATCTGCTGCAATGACCATGTTGCGCTGATCCACCCGGATCT
CGAGCGGGAAACCGAAGAGATCATCGCCGATGTCCTCGGTGTCGAAGTCT
TCCGTCAAACCGTCGCCGATAACGTCCTGACTGGCTCCTACATGGCCCTC
TCCAACCAAGGTGGTATCGTCCACCCCAAGACCTCCATCCGTGACCAGGA
TGAACTTTCCTCCCTCCTGCAAGTGCCCCTCGTCGCTGGTAGTGTCAACC
GCGGTAGCCCCGTCGTCGGTGCCGGCATGGTCGTGAACGACTGGCTCGCT
GTCACGGGTCTGGACACGACAGCCACGGAATTGAGTGTCATTGAAAGTGT
CTTCCGTCTGGGTGAGATGGGTCCCCGTGGTGTTGGAATGGGCGACGCCA
ACAAGGAGAGTATTGTGGAGAGTTTCTACTAGATGGCGGTCCGCGCGCAG
TTCGAGAACTCCAACGAAGTCGGTGTTTTCTCCCGTCTCACCAACTCGTA
CGCTATTGTTGCCATTGGCGCCTCCGAGAACTTCTACAGTGTATTCGAGG
CCGAATTGCAAGATGTCATTCCCATCTGCCACGCAACCATTGCCGGAACC
CGCATCGTTGGCCGTCTGACGGCAGGAAACCGTAATGGTCTCCTCGTCCC
CACCACCACGACAGACCAAGAGCTTCAACATCTCCGGAATACGCTACCCG
AATCGGTAAAGATTCAACGTATAGAGGAACGTCTATCGGCTCTGGGGAAC
GTCATCTGCTGCAATGACCATGTTGCGCTGATCCACCCGGATCTCGAGCG
GGAAACCGAAGAGATCATCGCCGATGTCCTCGGTGTCGAAGTCTTCCGTC
AAACCGTCGCCGATAACGTCCTGACTGGCTCCTACATGGCCCTCTCCAAC
CAAGGTGGTATCGTCCACCCCAAGACCTCCATCCGTGACCAGGATGAACT
TTCCTCCCTCCTGCAAGTGCCCCTCGTCGCTGGTAGTGTCAACCGCGGTA
GCCCCGTCGTCGGTGCCGGCATGGTCGTGAACGACTGGCTCGCTGTCACG
GGTCTGGACACGACAGCCACGGAATTGAGTGTCATTGAAAGTGTCTTCCG
TCTGGGTGAGATGGGTCCCCGTGGTGTTGGAATGGGCGACGCCAACAAGG
AGAGTATTGTGGAGAGTTTCTACTAGATGGCGGTCCGCGCGCAGTTCGAG
AACTCCAACGAAGTCGGTGTTTTCTCCCGTCTCACCAACTCGTACGCTAT
TGTTGCCATTGGCGCCTCCGAGAACTTCTACAGTGTATTCGAGGCCGAAT
TGCAAGATGTCATTCCCATCTGCCACGCAACCATTGCCGGAACCCGCATC
GTTGGCCGTCTGACGGCAGGAAACCGTAATGGTCTCCTCGTCCCCACCAC
CACGACAGACCAAGAGCTTCAACATCTCCGGAATACGCTACCCGAATCGG
TAAAGATTCAACGTATAGAGGAACGTCTATCGGCTCTGGGGAACGTCATC
TGCTGCAATGACCATGTTGCGCTGATCCACCCGGATCTCGAGCGGGAAAC
CGAAGAGATCATCGCCGATGTCCTCGGTGTCGAAGTCTTCCGTCAAACCG
TCGCCGATAACGTCCTGACTGGCTCCTACATGGCCCTCTCCAACCAAGGT
GGTATCGTCCACCCCAAGACCTCCATCCGTGACCAGGATGAACTTTCCTC
CCTCCTGCAAGTGCCCCTCGTCGCTGGTAGTGTCAACCGCGGTAGCCCCG
TCGTCGGTGCCGGCATGGTCGTGAACGACTGGCTCGCTGTCACGGGTCTG
GACACGACAGCCACGGAATTGAGTGTCATTGAAAGTGTCTTCCGTCTGGG
TGAGATGGGTCCCCGTGGTGTTGGAATGGGCGACGCCAACAAGGAGAGTA
TTGTGGAGAGTTTCTACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0043022ribosome binding
Vocabulary: Biological Process
TermDefinition
GO:0042256mature ribosome assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIF6KJC3_006915Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006915-T1KJC3_006915-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006915-T1.utr5p1KJC3_006915-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006915-T1.exon1KJC3_006915-T1.exon1Aspergillus niger KJC3exon
KJC3_006915-T1.exon2KJC3_006915-T1.exon2Aspergillus niger KJC3exon
KJC3_006915-T1.exon3KJC3_006915-T1.exon3Aspergillus niger KJC3exon
KJC3_006915-T1.exon4KJC3_006915-T1.exon4Aspergillus niger KJC3exon
KJC3_006915-T1.exon5KJC3_006915-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006915-T1.cdsKJC3_006915-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006915-T1.utr3p1KJC3_006915-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092644O2
DBxrefInterPro:IPR002769
DBxrefPFAM:PF01912
ProductEukaryotic translation initiation factor 6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:844045..845658 +
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