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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1472916..1476212- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007110-T1 ID=KJC3_007110-T1|Name=KJC3_007110-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3297bp|location=Sequence derived from alignment at ch5:1472916..1476212- (Aspergillus niger KJC3)
CTCATAGGGCCAGCAATCATATAACATTTATCTATGCTTTTACTCCCTCC
TTCCCCCTCCATCTGATCTTCCTCTTCCATCCTCATTCCACATTCCTCTT
CTCCCTCACATACGGGTCGGGCCTTGGTGAAGCTGTTGAGACAACTCGCC
CATTACCATTACAAAAGTGATATCCTTACCTACTTTGTTCCTCCTCTTCC
TCTTCCTCTGCCTCTGCACTGCCCTTCTCTTGCTTCCTCCACGCAGTGTC
CCACCTACCTTCTTTTATTTTTATTACCTTTCAGAGATCCCATTGCTTTG
CATTTCATCATCTTCCCTCTGCTACTTGCGGTGTTAAACTTTTGCTGCCT
CTTCTGCCTTCCCAGCGCCCCAAGATTCGGATCTGCAAGTGACAAAATAC
TTCGTCGCCTTGCAGTTGGTGGATTCAAATACCGAGCTTTTAGACACGTT
CTTCCAAGCTCCCTCTTTTGTCTTCTATAGGGAAATTCCCCGAACCTCGT
TGGAGCTTGCTTGTGTCTCGTCACTACTACTAGGCTCCCGCTAAATACCA
GGACTATCAGGGCGATAGATAGTAGGTTCCCCGAGCGGGCCGTTCCCAAT
CTTTGAACTCAATAACCTTCTCTCCCAAGCCCCCGGGTCCAAGGGAGCCC
TGCCGGACATTATTTCCATGCCATTGATTGAGACATCAGATTGCTAACGC
TCATCATGTTGCAGATCGATTGCATCCCTCCTTCTCTTCTTCTACATTAA
CCCTCGCATCCTCCCACCTGGAACCCAAGGAAACGAGCCAACCACTGCAC
GGAGCGTGGGCATGCAATCTCACGCAGACACTTCCGACTTCGTACTATTC
CCTACCCACTTCACCGGTGACAACAAAATGCTGGCCCTGGATTCGTCCAG
ACAGCAGCATCCCCCGTACTTCCAGTCCTACCCCATGGATCCTAGTACCT
TTATCGATCCTCTTGCCTTCCATGTGGACGATCTAGGTTTCAGCCAGACC
CACGACCAATCCGGTGTACCCCAGTCCTCCAACTACGGTACGCCGCCTAT
CTACTCCGAGTCTTTCTCGGACGCCAATAAAGCTGCCGGATTTCCACCTA
TGCCCGCCACTCCCCCGTCCCTCCCTTATTCTTCCGATCACTTCATTCCT
GGACTTTCTACTGCGTCCGGTCCTTCCGTTGCCAGCGCCTCCTCGTCCGC
CATCGGATCGCCCAATACGGGTTCTGCGCATGCTATCTCGGAAGACTGGG
TCCAGACAACGAATGGCTTGGGGCTTCCCGCCGCGGTCATGAGTGACTAC
TTCCCCAATGAGTATTTTGGCAACACGCTGGACTCGGAGGGTTTCTACCA
GCAGAAATGCCCAGAAAACTTTGTTGGTGTGTTCCAACGTCCAGATTCGA
TACACTGTCCTGCGACCTCTGCTGACCACTAGGCCACCTCAGACCCTTCT
GTTATACAGCCAATGCTACAGCAGCATCCCATCAACCCCCCTACCATCTC
GTTCCCCGAACAGCCTGATTATGTCGTATCGCAAAGCGCGTTTCTGCCCC
AATCCCCTGACCCTTCCCACCTCCATCCCTCGGAGAGCTACGCTGCGAAC
CAATCATTCGCACAGCACCCCAGTCTTGTGCCGACCTCTTCCCCTTCCAT
GGCTCCTGCCCTACCCCAGTCACGACGTGCTTCCTCTTATGACCGGAGGT
CATCGGTCTCCTCGGTTCAGTCCCAGCGCTCTCATCCAAGCCCGGCTGCC
AGTAATGCAGAGTCCGACGATGACACCAAGGAAAAGGGACGATGCCCTTT
CCCGGAGTGCAGACGTGTTTTCAAGGATCTCAAGGCTCACATCCTGACAC
ACCAGTCAGAGAGACCCGAAAAGTGCCCCATCGTCACCTGCGAATACCAT
ATCAAGGGTTTCGCCCGCAAGTATGACAAGAACCGTCATACTCTTACTCA
CTACAAAGGAACGATGGTTTGCGGCTTCTGCCCGGGGTCTGGGTCGCCCG
CCGAGAAGAGCTTCAACAGGGCGGACGTCTTCAAGCGCCACTTGACATCA
GTGCATGGCGTCGAACAGACACCACCTAACTGCCGGAAGAGAAGTCCAAC
TGCAGCGGCAAGCAAGGGGACATCTAGCTACAGCCCCGATGCGACTGGCA
AGTGCTCAACTTGCTCCATTACGTTCAGTAACGCACAGGACTTCTACGAG
CATCTGGACGACTGTGTGCTTCGGGTTGTGCAACAGGAAGAGCCCAGCGA
GGCCATCAACCAGAAGCTGCTTTCTGAAGTCGATGCTGACGAGGAGGTGC
AAAAGACGATGGAGAAACATAACTTGAACGACACGGCTGGCACCGTCGAC
ATATACAACGACGAATATGATGATGACGATGATGACGCTTACGAATATTC
GAACCTACGTTCGGGCAAAGGCCCCCTGAAGAGCACCAAGGGATCAGGGG
CGGTGGCCCGTCCTATCTTGGGCGTCAACAACGCAGTCACAAAGGGTTCG
TCCAATGCCAATGCTAAGATGCGTGCGACTACATCCAAGCGACGCAACAA
TCGTGATCGTTACCCTCAGTCCTGGGGTTGCCCTAGCAGCAGCATCAAAA
CGAAGAAGCGTGTCCTATGTGTCTTTGATGGGCAGCGCCGTCTGTGGAAG
GACGAGATGATGCTTGACAATGAGTTCGAAGTCCGCGTCAAACTTCCGGG
TGGTGCAGGAGATGGCACCAACCGGGAAGCTTACGTGACTGACTTGGACG
TCGAGACATTGAAGCGTGCTGAGGGTGTTCTTAGTGCCAATGACGAAGAA
CGCGGCCCTTGGGTCGACAACCAGTCCACCCAGCTCATTGGACAACCGGC
CGTTCTCCTCCCTGATACGTACCGGCCGCATGATGCCGAGCCCATGGACA
TGACCTACTAAGTCCGGAGGAAGACAGGACCCCATCTCCATCCATTCCCT
TCATTTTGTTCGATTCTGACATGTCATATTTTGCATATCGTGGGTTTTGC
ATTTGTGGCATGACGAGAGCGATTTGTTTATTTGTGTTCGACCAGTTTTA
TCTTGATACCACCGTTCTGCAGATTTTCTTGCTTTATTGATGGGCACCCA
TGGAGGCTGCGCCCGTGGTCCTGTAATAATATCCCTTATGTTACTTGTGC
TTGGCTATGGATTGGGCGTTTGGGCAACTAAAACGAGAATTATCTTGAAA
TGCGGGTCATATCCTACTTGAAAAATGGGAAGGTGAATTTCTCAAAATGT
AAAATTCGCGTTTGAGAGCAGACATAAATCATCACATCTTTTTTGAG back to topCoding sequence (CDS) from alignment at ch5:1472916..1476212- >KJC3_007110-T1 ID=KJC3_007110-T1|Name=KJC3_007110-T1|organism=Aspergillus niger KJC3|type=CDS|length=4068bp|location=Sequence derived from alignment at ch5:1472916..1476212- (Aspergillus niger KJC3)
ACCCTTCTGTTATACAGCCAATGCTACAGCAGCATCCCATCAACCCCCCT
ACCATCTCGTTCCCCGAACAGCCTGATTATGTCGTATCGCAAAGCGCGTT
TCTGCCCCAATCCCCTGACCCTTCCCACCTCCATCCCTCGGAGAGCTACG
CTGCGAACCAATCATTCGCACAGCACCCCAGTCTTGTGCCGACCTCTTCC
CCTTCCATGGCTCCTGCCCTACCCCAGTCACGACGTGCTTCCTCTTATGA
CCGGAGGTCATCGGTCTCCTCGGTTCAGTCCCAGCGCTCTCATCCAAGCC
CGGCTGCCAGTAATGCAGAGTCCGACGATGACACCAAGGAAAAGGGACGA
TGCCCTTTCCCGGAGTGCAGACGTGTTTTCAAGGATCTCAAGGCTCACAT
CCTGACACACCAGTCAGAGAGACCCGAAAAGTGCCCCATCGTCACCTGCG
AATACCATATCAAGGGTTTCGCCCGCAAGTATGACAAGAACCGTCATACT
CTTACTCACTACAAAGGAACGATGGTTTGCGGCTTCTGCCCGGGGTCTGG
GTCGCCCGCCGAGAAGAGCTTCAACAGGGCGGACGTCTTCAAGCGCCACT
TGACATCAGTGCATGGCGTCGAACAGACACCACCTAACTGCCGGAAGAGA
AGTCCAACTGCAGCGGCAAGCAAGGGGACATCTAGCTACAGCCCCGATGC
GACTGGCAAGTGCTCAACTTGCTCCATTACGTTCAGTAACGCACAGGACT
TCTACGAGCATCTGGACGACTGTGTGCTTCGGGTTGTGCAACAGGAAGAG
CCCAGCGAGGCCATCAACCAGAAGCTGCTTTCTGAAGTCGATGCTGACGA
GGAGGTGCAAAAGACGATGGAGAAACATAACTTGAACGACACGGCTGGCA
CCGTCGACATATACAACGACGAATATGATGATGACGATGATGACGCTTAC
GAATATTCGAACCTACGTTCGGGCAAAGGCCCCCTGAAGAGCACCAAGGG
ATCAGGGGCGGTGGCCCGTCCTATCTTGGGCGTCAACAACGCAGTCACAA
AGGGTTCGTCCAATGCCAATGCTAAGATGCGTGCGACTACATCCAAGCGA
CGCAACAATCGTGATCGTTACCCTCAGTCCTGGGGTTGCCCTAGCAGCAG
CATCAAAACGAAGAAGCGTGTCCTATGTGTCTTTGATGGGCAGCGCCGTC
TGTGGAAGGACGAGATGATGCTTGACAATGAGTTCGAAGTCCGCGTCAAA
CTTCCGGGTGGTGCAGGAGATGGCACCAACCGGGAAGCTTACGTGACTGA
CTTGGACGTCGAGACATTGAAGCGTGCTGAGGGTGTTCTTAGTGCCAATG
ACGAAGAACGCGGCCCTTGGGTCGACAACCAGTCCACCCAGCTCATTGGA
CAACCGGCCGTTCTCCTCCCTGATACGTACCGGCCGCATGATGCCGAGCC
CATGGACATGACCTACTAAATGCAATCTCACGCAGACACTTCCGACTTCG
TACTATTCCCTACCCACTTCACCGGTGACAACAAAATGCTGGCCCTGGAT
TCGTCCAGACAGCAGCATCCCCCGTACTTCCAGTCCTACCCCATGGATCC
TAGTACCTTTATCGATCCTCTTGCCTTCCATGTGGACGATCTAGGTTTCA
GCCAGACCCACGACCAATCCGGTGTACCCCAGTCCTCCAACTACGGTACG
CCGCCTATCTACTCCGAGTCTTTCTCGGACGCCAATAAAGCTGCCGGATT
TCCACCTATGCCCGCCACTCCCCCGTCCCTCCCTTATTCTTCCGATCACT
TCATTCCTGGACTTTCTACTGCGTCCGGTCCTTCCGTTGCCAGCGCCTCC
TCGTCCGCCATCGGATCGCCCAATACGGGTTCTGCGCATGCTATCTCGGA
AGACTGGGTCCAGACAACGAATGGCTTGGGGCTTCCCGCCGCGGTCATGA
GTGACTACTTCCCCAATGAGTATTTTGGCAACACGCTGGACTCGGAGGGT
TTCTACCAGCAGAAATGCCCAGAAAACTTTGTTGACCCTTCTGTTATACA
GCCAATGCTACAGCAGCATCCCATCAACCCCCCTACCATCTCGTTCCCCG
AACAGCCTGATTATGTCGTATCGCAAAGCGCGTTTCTGCCCCAATCCCCT
GACCCTTCCCACCTCCATCCCTCGGAGAGCTACGCTGCGAACCAATCATT
CGCACAGCACCCCAGTCTTGTGCCGACCTCTTCCCCTTCCATGGCTCCTG
CCCTACCCCAGTCACGACGTGCTTCCTCTTATGACCGGAGGTCATCGGTC
TCCTCGGTTCAGTCCCAGCGCTCTCATCCAAGCCCGGCTGCCAGTAATGC
AGAGTCCGACGATGACACCAAGGAAAAGGGACGATGCCCTTTCCCGGAGT
GCAGACGTGTTTTCAAGGATCTCAAGGCTCACATCCTGACACACCAGTCA
GAGAGACCCGAAAAGTGCCCCATCGTCACCTGCGAATACCATATCAAGGG
TTTCGCCCGCAAGTATGACAAGAACCGTCATACTCTTACTCACTACAAAG
GAACGATGGTTTGCGGCTTCTGCCCGGGGTCTGGGTCGCCCGCCGAGAAG
AGCTTCAACAGGGCGGACGTCTTCAAGCGCCACTTGACATCAGTGCATGG
CGTCGAACAGACACCACCTAACTGCCGGAAGAGAAGTCCAACTGCAGCGG
CAAGCAAGGGGACATCTAGCTACAGCCCCGATGCGACTGGCAAGTGCTCA
ACTTGCTCCATTACGTTCAGTAACGCACAGGACTTCTACGAGCATCTGGA
CGACTGTGTGCTTCGGGTTGTGCAACAGGAAGAGCCCAGCGAGGCCATCA
ACCAGAAGCTGCTTTCTGAAGTCGATGCTGACGAGGAGGTGCAAAAGACG
ATGGAGAAACATAACTTGAACGACACGGCTGGCACCGTCGACATATACAA
CGACGAATATGATGATGACGATGATGACGCTTACGAATATTCGAACCTAC
GTTCGGGCAAAGGCCCCCTGAAGAGCACCAAGGGATCAGGGGCGGTGGCC
CGTCCTATCTTGGGCGTCAACAACGCAGTCACAAAGGGTTCGTCCAATGC
CAATGCTAAGATGCGTGCGACTACATCCAAGCGACGCAACAATCGTGATC
GTTACCCTCAGTCCTGGGGTTGCCCTAGCAGCAGCATCAAAACGAAGAAG
CGTGTCCTATGTGTCTTTGATGGGCAGCGCCGTCTGTGGAAGGACGAGAT
GATGCTTGACAATGAGTTCGAAGTCCGCGTCAAACTTCCGGGTGGTGCAG
GAGATGGCACCAACCGGGAAGCTTACGTGACTGACTTGGACGTCGAGACA
TTGAAGCGTGCTGAGGGTGTTCTTAGTGCCAATGACGAAGAACGCGGCCC
TTGGGTCGACAACCAGTCCACCCAGCTCATTGGACAACCGGCCGTTCTCC
TCCCTGATACGTACCGGCCGCATGATGCCGAGCCCATGGACATGACCTAC
TAAATGCAATCTCACGCAGACACTTCCGACTTCGTACTATTCCCTACCCA
CTTCACCGGTGACAACAAAATGCTGGCCCTGGATTCGTCCAGACAGCAGC
ATCCCCCGTACTTCCAGTCCTACCCCATGGATCCTAGTACCTTTATCGAT
CCTCTTGCCTTCCATGTGGACGATCTAGGTTTCAGCCAGACCCACGACCA
ATCCGGTGTACCCCAGTCCTCCAACTACGGTACGCCGCCTATCTACTCCG
AGTCTTTCTCGGACGCCAATAAAGCTGCCGGATTTCCACCTATGCCCGCC
ACTCCCCCGTCCCTCCCTTATTCTTCCGATCACTTCATTCCTGGACTTTC
TACTGCGTCCGGTCCTTCCGTTGCCAGCGCCTCCTCGTCCGCCATCGGAT
CGCCCAATACGGGTTCTGCGCATGCTATCTCGGAAGACTGGGTCCAGACA
ACGAATGGCTTGGGGCTTCCCGCCGCGGTCATGAGTGACTACTTCCCCAA
TGAGTATTTTGGCAACACGCTGGACTCGGAGGGTTTCTACCAGCAGAAAT
GCCCAGAAAACTTTGTTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007110-T1.utr3p1 | KJC3_007110-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007110-T1.utr5p1 | KJC3_007110-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013087 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1472916..1476212 - |
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